Ggra5334.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5334.t1
Unique NameGgra5334.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
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BLAST of Ggra5334.t1 vs. uniprot
Match: A0A2V3IFS7 (Auxilin-related protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS7_9FLOR)

HSP 1 Score: 250 bits (638), Expect = 4.900e-74
Identity = 128/145 (88.28%), Postives = 137/145 (94.48%), Query Frame = 0 
Query:    1 MDSSAFVKGFKNIRNGVIRTAERASVEVRKAVGISNISLPESFPEYDHISAEFKAQTKNLDTLHHDALSAYEAIQRSTGTAYTLAAKLRDSLSSNSTGPPYLAADALVNVQASIVDDVLPRVERRVKKRVIDPTKLELTRARPRN 145
            MD SAFVKGFKNIRNGVIRTAERASVEVRKAVG+SN+SLPESFPEYDH++ EF+ QTKNL+TLHHDALSAYE+IQRSTGTAYTLAAKLRDSLSSNSTG PYLAADALVNVQA+IVDDVLPRVERRVKKRVIDPTK EL +AR  N
Sbjct:    3 MDGSAFVKGFKNIRNGVIRTAERASVEVRKAVGLSNLSLPESFPEYDHLAVEFRTQTKNLETLHHDALSAYESIQRSTGTAYTLAAKLRDSLSSNSTGAPYLAADALVNVQAAIVDDVLPRVERRVKKRVIDPTKTELNKARQVN 147
The following BLAST results are available for this feature:
BLAST of Ggra5334.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFS74.900e-7488.28Auxilin-related protein 2 n=1 Tax=Gracilariopsis c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 11..141
e-value: 2.3E-5
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:124702..127164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5334.t1Ggra5334.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 124702..127164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5334.t1 ID=Ggra5334.t1|Name=Ggra5334.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MDSSAFVKGFKNIRNGVIRTAERASVEVRKAVGISNISLPESFPEYDHIS
AEFKAQTKNLDTLHHDALSAYEAIQRSTGTAYTLAAKLRDSLSSNSTGPP
YLAADALVNVQASIVDDVLPRVERRVKKRVIDPTKLELTRARPRNAQNQN
PGFGGMSGMSGMYNNMGRAGMGGMGRGGMGGMGGMGRGNMGMGNMGRAGM
GFMGSGMGGMGMGGMGMGGRGMNGMGMGGMGRRGGMSGMSQNYGRGMNSK
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf