Ggra5296.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5296.t1
Unique NameGgra5296.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1591
Homology
BLAST of Ggra5296.t1 vs. uniprot
Match: A0A2V3IT18 (IPT/TIG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT18_9FLOR)

HSP 1 Score: 1980 bits (5130), Expect = 0.000e+0
Identity = 1002/1577 (63.54%), Postives = 1267/1577 (80.34%), Query Frame = 0
Query:   14 MFSIPFSLVWFCFLLDSGKA-ELQQRSYFPSSLNIDRQLESIPPVGITLESQSEVNFFLVNGESDELVVSFTFMPPSGSSPGDFVTSFSCESPIVLFNDSCTITNTVSTIVGTDATAFNTTVACTFEGFPAITTCSLSATSIARQLLQFQSDEVPVNVYGIVLYIPDENGEVSENARVLTGYANSFELEAYDREDQGVREIPSYGILPGSDVFTGSSGISFLNLASVSVIADDQIFWYNTSTCSITESSFDSSRIVLDNPNRCGLSFAARDEDVYPTFGAQFRPYKSGKFTLQLNWDSLGTSEEAYEQAVVFSVVERAPPVVVDISKRAVYQSLPCGVETMNITGYNFRFSDKRQILTSNEDGSVSVWPEAEESFSYNEAEDLSFLSFESSGGVGKGVSFAVAIFYGSESMNAITLLN--GSIFTTDFSIPPTMLGLSPNVTEPEGGAKILLDGTFDGFRNSSFVRVAGFDIRGTDVEILENGSMAFVAPPLSSLGKQFTYEVYVEICAERSRSLSLTYNVAPIVSITAADSSTNEGNAFVIPYEGEATFVAEVSANNINTTYLWSLLDNDGNVVSLQNSSVSEQIITVLPDMIGPSGTTFVLQVMVTNSIGRIDNSNVTIVLANPVDEFILVNVFEIETLRRSMNTTTLIQASLVVEVVNISEVLLEWRYRGDRFVVDEGMEFRNASLSAQDLTGPTKLGLEFNIARRDLELGISQLELIATLASNQDINGRDSIDILVVPSELEAIINDGLNGTLILSGNDLHLNGGDSFDPDVLPDESNPTTEIQYDWIFCQSSLDSSFTTSVTDCSSILPEIRNSVNITIQAADLLESRLDTTADPESTFFLFGLEISKDNRSSETYAYFEMRTVEALEEVPNLGSLEVVDGKGIPIDLKSASVFSDIVIQPESDDAFVTWSFDMSKVSQQYLLLQQGVLKEGPGFVSTRGEKSRLPLAFTANALEEATEYIVVVSVFSSQSSLVQTYEVSFVTNEVPTLSCTGPVEESGITSETMFTISGQLSFETQGMEYCFSIISSLNERFSVGKGCSSVPFASFSIHKDGIYQIECEAKTTGGNLVDKVTLNRTLSVSTPDPPGDRTVLGNLAERLANLTEEAALCEALRDHGCLTSLISVVSNVAEIVVSITDSDTSEEAQLLVDQTQSYVANLSRISEDLTRTTVYRPNQILPAIDLTFYLLLVPQSLFEDESTLFAALRQAETAIEITEDSTIEALVSDSLVEKVSTIANISLALAFNIGQDGTSRRRLLQEPGSIRRAFGVLLLKTARFIASVRAQQESCGFSGTESTALRDSDISRQVPVTSSNTEIPAVELHIQVSCNVNQVREVVQLSEIQRKVCPGIIPDLTSKRVVVTIGVIPEESLTATGLLVDVDNRATQCPILEVRGVETDEIPAQCFEITMKIATDSSEAPGDIKAGIVRNDSSVPLDFCDVDDCFIFQTNEEDVVSATDSTITILTKSQGLIVAGIPKERIAGPVDEDINGNGVADLGSVGVAVGIGIAFVVGTILFLWFAATHLVVTAP-ATAVDDDWEYVERDAYGRGIEDEDRNPNPDFKAEHFLPTNAELP 1586
            +FSI   L+W     + G A +L   S   + L   RQL SIPPVGI++ SQSE +F+L+NGES+ELV +F FMPPS SSP ++V SF CES IVLFNDSC+ITNT+S IVGT+ATA+NTTV CTFE FPA T C+L+ATS+ARQL QF S+ +P NVYGIV Y PD++G VS++A +++GYAN++EL +YDRE QG+R+IPSYGI P    +TGS GISFL LA+VSV+ DD IF YN S CSIT ++F S  +VLDN   CGL  A   E  +P  GAQFRPYKSGKFTLQLNWD++GT+ E YEQA+VFSVVERAPPV+  + K+++YQSLPCG ET+N+TG+NFR SDKR++L SNEDG++SVW    +SF Y++  D S    ES GGVG+ V F +   YGS+ ++A+ L +   S+F+ DFS PP +LG++PNV+EPEGG++I+L GTFDGF+ +S +R+ GF+IRG+DV+I  +  +AF +PPLS+LGKQF+Y V VE+CAERS    L YNVAP+++ITAADSSTNE  ++VIPY+GEATFVAEVS NN   +YLW LL  DG  + L+N++++EQI TV  DMI PSGT F+LQ  V NS+G  D S VTI LA PV EFILVNVFE+E L RS+N+TTL+QASLVVE  N + V+LEW YR   +VVDE  +FRN+S++ Q +TGPTKLGLEFNIAR+DL +G+S+LELIATL SN  I+GRD+++I+V+ SEL+AIINDGLNGTL+LSG DL+L+GG+SFDPDVLPDESNPTTEIQYDW  CQ SLD+SFT  V DCS ILPEI NSVNITI A++L +SRLD + DP  TFF FGL +SKDNR++ TY+YFE+RT  + E VP L +LEVVD KGI ID+KSA+  +DIVIQP SDDA V+WSFDM+++SQQYLLLQ GVLK+GPG+VS RG++SRLPLAF AN+LEE TEY V VSV+S++SS+VQ YE+SF+T+E+P LSCT P+E  GI SETMFTISGQLSFE Q +EYCF + SS  ERFSVGKGCSSVPFASF+ H++GIYQIECEA+TT G LVD+V LN TLS+  P P  D+TVL NL++R+ANLTEEA LCEA+RDHGCL SLISV +++A IVVS+TDSD SEEAQ LVDQTQSYVANLSRISE LT TTVYRPNQI  AIDL+FYLLLVPQSLFEDE+TLFAAL+QAE+AIEITEDST+EALVSDSLVEKVSTIAN+SLA AFNIGQ+GTSRRRL ++ G +RRA+GVLLLKT + IAS+RAQQE+CGFSG EST LR+S+++RQVP   S++ IP V+LH+QVSC+ NQV + + LS +Q+++CPG++  ++S+R+V +  +IPEES+ ATGLL+D+D+R T CPILEVRG+  DEIP +CF +TM+I      +  + +AGI+ NDSSVPLD C  D+CFIF+T+++D+V  TD+ +TI TK+QG  +AGIPKER  GP+ EDI G+ +A+ G++G+ +GIG+AFV+GT+L  WFAATH+VV AP A AV +DWEYVERD +GRG+++++ + N  ++AEH+LP  A+LP
Sbjct:   18 LFSICL-LIW----CNGGLAFDLPALSRLRTGLGTSRQLNSIPPVGISVVSQSETDFYLINGESEELVANFIFMPPSDSSPEEYVMSFGCESDIVLFNDSCSITNTISDIVGTEATAYNTTVVCTFERFPAETFCTLTATSVARQLQQFPSESLPANVYGIVFYTPDQDGGVSKDAIIVSGYANTYELASYDRELQGLRDIPSYGIFPAGTAYTGSDGISFLGLATVSVVVDDYIFRYNVSECSITGAAFISGTLVLDNSGECGLGMAVSSETAFPILGAQFRPYKSGKFTLQLNWDTIGTTGEVYEQAIVFSVVERAPPVITSVEKQSIYQSLPCGTETLNVTGFNFRLSDKRELLASNEDGTLSVWQGKPDSFLYDQLTDSSSFVLESVGGVGRNVPFTIRALYGSDFVDAVYLQDDASSLFSLDFSTPPELLGITPNVSEPEGGSRIVLVGTFDGFKATSVIRIGGFEIRGSDVQISSSSELAFTSPPLSALGKQFSYNVLVEVCAERSEPFPLMYNVAPLLTITAADSSTNEETSYVIPYDGEATFVAEVSENNNGASYLWQLLSTDGEEIPLENTTLTEQIFTVTADMISPSGTPFILQATVQNSVGLSDTSQVTIELATPVVEFILVNVFEVEVLTRSLNSTTLVQASLVVETSNYTGVVLEWVYRNRSYVVDENTQFRNSSVAGQSVTGPTKLGLEFNIARQDLVMGVSRLELIATLISNPIISGRDAVNIVVIHSELQAIINDGLNGTLLLSGTDLNLHGGNSFDPDVLPDESNPTTEIQYDWFSCQKSLDASFTNDVEDCSGILPEILNSVNITILASNLFDSRLDDSNDPNPTFFSFGLTVSKDNRTAVTYSYFELRTSSSSEPVPALTTLEVVDSKGIAIDVKSANTLTDIVIQPNSDDATVSWSFDMTRISQQYLLLQGGVLKDGPGYVSVRGQRSRLPLAFAANSLEEGTEYTVQVSVYSTESSIVQQYEISFLTSEIPKLSCTAPIENVGILSETMFTISGQLSFEAQNIEYCFFLSSSPEERFSVGKGCSSVPFASFTFHREGIYQIECEARTTSGALVDRVLLNTTLSIVPPTPTEDQTVLENLSDRVANLTEEAELCEAMRDHGCLISLISVANSIAGIVVSVTDSDASEEAQQLVDQTQSYVANLSRISETLTTTTVYRPNQIATAIDLSFYLLLVPQSLFEDENTLFAALKQAESAIEITEDSTVEALVSDSLVEKVSTIANLSLATAFNIGQEGTSRRRLQRDTGILRRAYGVLLLKTTKLIASIRAQQETCGFSGIESTTLRESEVTRQVPRNRSDSRIPPVQLHVQVSCDENQVSKPLSLSAVQQQLCPGVLQSISSRRMVASFVIIPEESVRATGLLLDIDSRVTHCPILEVRGIVRDEIPPECFRVTMEINKTLGGSSEETRAGIIWNDSSVPLDVCGRDNCFIFRTDDDDIVQVTDTDVTISTKNQGFFIAGIPKERAPGPI-EDIRGSDLAENGTLGIVLGIGVAFVLGTVLVTWFAATHVVVVAPSAAAVGEDWEYVERDNFGRGLQEDETDRN--YRAEHYLPKGAKLP 1586          
The following BLAST results are available for this feature:
BLAST of Ggra5296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT180.000e+063.54IPT/TIG domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1107..1127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1559..1573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1559..1590
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1533..1590
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1509..1532
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..1508
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availableTMHMMTMhelixcoord: 1512..1534
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 711..1024
e-value: 4.1E-16
score: 58.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000082_piloncontigtig00000082_pilon:257492..262264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5296.t1Ggra5296.t1Gracilaria gracilis GNS1m malemRNAtig00000082_pilon 257492..262264 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5296.t1 ID=Ggra5296.t1|Name=Ggra5296.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1591bp
MRSGRSEIARVRKMFSIPFSLVWFCFLLDSGKAELQQRSYFPSSLNIDRQ
LESIPPVGITLESQSEVNFFLVNGESDELVVSFTFMPPSGSSPGDFVTSF
SCESPIVLFNDSCTITNTVSTIVGTDATAFNTTVACTFEGFPAITTCSLS
ATSIARQLLQFQSDEVPVNVYGIVLYIPDENGEVSENARVLTGYANSFEL
EAYDREDQGVREIPSYGILPGSDVFTGSSGISFLNLASVSVIADDQIFWY
NTSTCSITESSFDSSRIVLDNPNRCGLSFAARDEDVYPTFGAQFRPYKSG
KFTLQLNWDSLGTSEEAYEQAVVFSVVERAPPVVVDISKRAVYQSLPCGV
ETMNITGYNFRFSDKRQILTSNEDGSVSVWPEAEESFSYNEAEDLSFLSF
ESSGGVGKGVSFAVAIFYGSESMNAITLLNGSIFTTDFSIPPTMLGLSPN
VTEPEGGAKILLDGTFDGFRNSSFVRVAGFDIRGTDVEILENGSMAFVAP
PLSSLGKQFTYEVYVEICAERSRSLSLTYNVAPIVSITAADSSTNEGNAF
VIPYEGEATFVAEVSANNINTTYLWSLLDNDGNVVSLQNSSVSEQIITVL
PDMIGPSGTTFVLQVMVTNSIGRIDNSNVTIVLANPVDEFILVNVFEIET
LRRSMNTTTLIQASLVVEVVNISEVLLEWRYRGDRFVVDEGMEFRNASLS
AQDLTGPTKLGLEFNIARRDLELGISQLELIATLASNQDINGRDSIDILV
VPSELEAIINDGLNGTLILSGNDLHLNGGDSFDPDVLPDESNPTTEIQYD
WIFCQSSLDSSFTTSVTDCSSILPEIRNSVNITIQAADLLESRLDTTADP
ESTFFLFGLEISKDNRSSETYAYFEMRTVEALEEVPNLGSLEVVDGKGIP
IDLKSASVFSDIVIQPESDDAFVTWSFDMSKVSQQYLLLQQGVLKEGPGF
VSTRGEKSRLPLAFTANALEEATEYIVVVSVFSSQSSLVQTYEVSFVTNE
VPTLSCTGPVEESGITSETMFTISGQLSFETQGMEYCFSIISSLNERFSV
GKGCSSVPFASFSIHKDGIYQIECEAKTTGGNLVDKVTLNRTLSVSTPDP
PGDRTVLGNLAERLANLTEEAALCEALRDHGCLTSLISVVSNVAEIVVSI
TDSDTSEEAQLLVDQTQSYVANLSRISEDLTRTTVYRPNQILPAIDLTFY
LLLVPQSLFEDESTLFAALRQAETAIEITEDSTIEALVSDSLVEKVSTIA
NISLALAFNIGQDGTSRRRLLQEPGSIRRAFGVLLLKTARFIASVRAQQE
SCGFSGTESTALRDSDISRQVPVTSSNTEIPAVELHIQVSCNVNQVREVV
QLSEIQRKVCPGIIPDLTSKRVVVTIGVIPEESLTATGLLVDVDNRATQC
PILEVRGVETDEIPAQCFEITMKIATDSSEAPGDIKAGIVRNDSSVPLDF
CDVDDCFIFQTNEEDVVSATDSTITILTKSQGLIVAGIPKERIAGPVDED
INGNGVADLGSVGVAVGIGIAFVVGTILFLWFAATHLVVTAPATAVDDDW
EYVERDAYGRGIEDEDRNPNPDFKAEHFLPTNAELPPRQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002859PKD/REJ-like