Ggra5192.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5192.t1
Unique NameGgra5192.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length981
Homology
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A2V3J848 (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR)

HSP 1 Score: 782 bits (2019), Expect = 5.530e-269
Identity = 437/833 (52.46%), Postives = 571/833 (68.55%), Query Frame = 0
Query:  164 SAHSHGETTVSNPRCTLVEESANCALKPASTSSENWTEKLNTGSVLEVWSKGEIRFAYVCSVSERTIGVNFVEFPNNDDFTSQESKISFGEVISIWPKSITPPSPKDLASTVEMGLNFLRNSPPRSLDLSNTYNSMRRIPKGNPEALQDSYQIALSHFSLPASAAPKRHGAVTAAAGILIASDTSRFKRAAAGSGWRALPPSVVESRNRCSFLDLCKMIIENPTDGDIRRPAAWSREQLDILREIELVAAGGGMARGKAAAALESLGYHPTDDGATHLLLDLEFWSTGPVQT------DAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNS--TPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKNGKQARFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVLSDDAQARDIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYVARCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVLRGIVRNVTITKSSTLRVDVTLEGTGLSTIVSVSGLLLTNILKLSQA-----EENNGKGTK----RTQMILAAATSIMAPGSRVRVQILNIDTSARTIKGAAFDLV 979
            S H          RC ++  + N +   +    ++WT+ L  GSV+E+WS+ ++RFA V S+ E+ I          +   S E+KIS+GEV+++WP SI P S   LA  V +GLNFL+NS PRSLDL++ Y  MRRIPKGN  A + S++IALS F L  +A P+R  AVT AA IL+ +DT+ FKRA  G GWRALPPSV E+R RCSF+D CK I+E+ +       +AWSRE LDIL EIE+ AAGGG+  G+AA ALE+LGY  TD+GATHLLLD+E+WS+ PVQ+      D+KK   P      +  E S  SS + SR +S  TPS       WAFPP IL +A +IR+ +R RR+ L A E  R++   RRLL+      LRVYCID++ SRFLDD+FSV+  +  K+ RFFLHITDVDE VK GS ID +ARERG SLYLPL+PLHMLPP AM+AASFST+LP  AITI ID +L+   +  W++FPS+VPPV RINY+QFD ++  DA+A  + ++EL DL+L+AK+A  L  KLD RRLRR++ T  + L+     E   +++K +A VRL+K++  SSSK   VARVIDFQS GAHA+VD ILT+ G LIRQFA++N V LPEGRDA++YVARCGTAPLRRY DL +QRQIK VLF K+P GRR+M ELR WLARRHS  ++ V++ R+SALFESLS HCAQQ A  G+ +A++RG VRN TITKSS LR++V L+GTGLST+  VS  L   I +  +         +G G+K    R + ILA+A S++APGS V VQI +++ S++ IKG   D++
Sbjct:   43 SPHRVPPNFAQTTRCQIL--ATNASETESDVRPKSWTDALRKGSVVELWSESQLRFALVSSLYEKGILAKVFIVSKGEVNISAETKISYGEVVAVWPASINPHSASALAKIVGLGLNFLKNSAPRSLDLADIYGDMRRIPKGNARAHRSSHEIALSLFPLSPTAEPERRAAVTVAAAILLGADTTHFKRAPPGFGWRALPPSVAEARGRCSFVDTCKSILEDRSHCS----SAWSREHLDILHEIEVAAAGGGVPNGRAATALEALGYRRTDEGATHLLLDIEYWSSVPVQSNDGAYPDSKKQSTPDT----VSGEES--SSTEASRGSSFQTPS-------WAFPPLILHDAHKIRSRARARRSALQATENPRQKDSARRLLRSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNIIKGDAKAIGLSREELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALPEGRDASTYVARCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRRMNELRNWLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGRVRNTTITKSSNLRIEVALDGTGLSTVSEVSNELFGYIKQRERQCNKDLSNGSGDGSKVAYQRNKSILASAKSVLAPGSLVSVQISDVNVSSQYIKGLIVDVL 856          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A5J4YVF8 (Putative ribonuclease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF8_PORPP)

HSP 1 Score: 292 bits (747), Expect = 6.960e-82
Identity = 243/812 (29.93%), Postives = 374/812 (46.06%), Query Frame = 0
Query:  181 VEESANCALKPASTSSENWTEKL-NTGSVLEVWSKGEIRFAYVCSVSERTIGVNFVEFPNNDDFTSQESKISFGEVISIWPKSITPPSPKD--------LASTVEMGLNFLRNSPPRSLDLSNTYNSMRRIPKGNPEALQDSYQIALSHFSLPASAAPKRHGAVTAAAGILIASDTSRFKRAAAGSGWRALPPSVVESRNRCSFLDLCKMIIE----NPTDGDIR--RPAAWSREQLDILREIELVAAGGGMARG---KAAAALESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKNGKQA--RFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVLSDDAQARDIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYVARCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVLRGIVRNVTITKSSTLRVDVTLEGTGLSTIVSVSGLLLTNILKLSQAEENNGKGTKRTQMILAAATSIMAPGSRVRVQILNIDTSARTIK 972
            V+ SA+ +    S  S ++  K+    +V+EVW    + +  V  + E+ + V+ V+    D    +  ++S  EV+  W  S    S  D        LA+ +      L+ + PRSL+L   +  M R+ KGNP++   S  +A   ++      P         AG+++ASD+ +FKR A G+GWRALP SV  SR   +F   C  I+     +P        +   WS E L +LR +E+ A  G  A      A A L +LG+  +       L  + FWS                           KS LD + + ++         WAFP  IL+ A+E R ++ +RR+ L   +  R          K        YCID+K + F DDA S +L     Q   R  +H+ DVD VV   S +D +AR+R  S+YLP  PLHMLP   +EAASFST LPT AITI      E   +++W+I  ++VP V  + ++Q   +L   A    + Q     L LL +    L   L   + RR+ + D                     SVR  ++      K+V V +   ++    H V+D++L  AG  IR+FAR++  YLPE R +  +  RCGTAP+R+Y DL IQRQIK+VL G EP+ R QM +L  W+  R   +++ V E+R+  L+E+L+ HCA++ A +    A++     + T+   +  +V V L  TGLS +  V                 N  G   +Q     +  ++ P    +V + ++D   R I+
Sbjct:   77 VDVSASTSRNIDSARSNHFVSKMPKENAVVEVWRSKRLVWGIVTELQEKHVVVDLVQ--PQDMQVLRNVRVSLDEVVGTWGSSSVISSSADADEEPVHILAAKISRATAVLQKAAPRSLNLEKLHAKMARLEKGNPKSHISSATVADFFYAQRVLRVPSDPDVERICAGLVLASDSVKFKRGAPGTGWRALPGSVAASRAANAFELECAAILNASEHSPASSSAEQAKQVVWSAEHLQLLRALEVFAISGPPASTFPKSARAPLSALGFGHSQSETKRFLQRIGFWS---------------------------KSDLDENGNRTS---------WAFPEHILEAAREQRDAAFQRRSQLQQSQRSRSA--------KQSTFSSTAYCIDDKSATFRDDAVSCRLVTVADQRLIRVCVHVADVDAVVPRDSAVDLVARDRAQSIYLPRGPLHMLPAFVVEAASFSTDLPTEAITIDFMVNPERNEVVSWDISRNVVPAVHVLTFEQAIDLLKA-APEGPLSQ----WLALLKEATNTLLRVLPADQPRRQFRAD-------------------FMSVRSAQR-----GKAVVVDK---YEFSEVHEVLDSVLNVAGHYIREFARKHRAYLPERRGSRYFAMRCGTAPMRKYMDLAIQRQIKAVLTGHEPSRREQMVQLNKWIESRLVENKQVVQEQRQVYLYEALADHCAKRKASSVGGSAIM-----DATVISRNANKVRVRLLQTGLSAVALV-----------------NANGVLSSQDKKTKSRKLLQPNDPCQVLVEHVDVQTRQIR 788          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A7S1TNE9 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD)

HSP 1 Score: 260 bits (665), Expect = 6.390e-71
Identity = 235/810 (29.01%), Postives = 364/810 (44.94%), Query Frame = 0
Query:  199 WTEKLNTGSVLEVWSKGEIRFAYVCSVSE--RTIGVNFVEFPNNDDFTSQES------KISFGEVISIWPKSITPPSPKDLASTVEMGLNFLRNSPPRSLDLSNTYNSMRRIPKGNPEALQDSYQIALSHFSLPASAAPKRHGAVTAAAGILIASDTSRFKRAAAGSGWRALPPSVVESRNRCSFLDLCKMIIENPTDGDIRR-------PAAWSREQLDILREIELVAAGGGMARGKAAAALESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKNG-----KQARFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINY----KQFDAVLSDDAQARDI--GQDELED--LRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYVARCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVLR-GIVRNVTITKSSTLRVDVTLEGTGLSTIVSVSGLLLTNILKLSQAEEN--------NGKGTKRTQMILAAATSIMAPGSRVRVQILNIDTSARTI 971
            W   ++ G+V+E+W    IRFA V    E  R+    ++E     D  + ES      K S  EV+S+WP  ++  S  +  +        + N+ PR+L+L   + S+    K NP     +   A + F+      P        AA +L++ D+ RFKRA AG GWRALP SV  +R   +F   C   I    +   R           WSR+ ++ILR IEL AA G      A      LG+    +GA   L  + FWS     +DA  G                  S+    D   P +       AFPP++L EA   R     RR +L + +   E      L   +G+  +   C+D+  + F DDA S     +G     +Q    +H+ DV  VV  GS +D+ AR R  S+YLP  PLHMLPP  MEA SFS T P+ A++I +    ++  ++ ++I  S+VPPV    +    +   A+ S++   + +   +D   D  L LL + A  ++     RR     K DR+D                  SVRL  + D+ + +    + +        H  +D +L +AG+ +R++AR + VYLPE R +  +  RCGTAPLR+Y DL +QRQIK++L  + PA R  M  L  WL  R   +++ V   R  AL  SLS+H + QS +A    A L  G V   ++       +D +   + +S  V    +L   ++ +   +          +      +  +LAAA   + P + VRV +  +D S++ +
Sbjct:    6 WQALVSPGAVVELWRDRTIRFARVLESPEGGRSFTARWMEDCAVADGDTDESTGRAFVKASMDEVVSVWPTYLSEASAAEFVAARGEAELLIANARPRTLELEALHASLCGFAKNNPRGCVSAVGAADALFASEQIRHPSELVGTICAA-LLLSLDSVRFKRAPAGYGWRALPKSVATARAYEAFEKRCAHAIGREKEQRSREINDNSSISTVWSRDDMEILRLIELCAASGKSFPRAAVPVFSKLGFESNANGARSFLQSVGFWSA----SDAHYG-----------------PSIQRDSDGGAPKEL-----LAFPPAVLAEAAHQREKIEARRRILASKDGRSEAG----LWSYMGKVAV---CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPKAVMRHRDSRGDAALALLVEAASAMSRADGGRR-----KRDRSDF----------------VSVRL--KGDRVTVQQYAFSTI--------HEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAMRCGTAPLRKYMDLVVQRQIKAILQYERPAKREDMVALNKWLESRLVETKKLVQAHREDALLASLSSHVSTQSRLADLGRAALSSGAVAPASVP------LDSSAGPSAVSAPVESPSILRARVMSVRNGQVRVRLSDTGLSAVSPLPSDPLLAAA---LEPNASVRVAVRRVDLSSKIV 741          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A1X6NHZ0 (RNB domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NHZ0_PORUM)

HSP 1 Score: 174 bits (440), Expect = 2.840e-44
Identity = 104/282 (36.88%), Postives = 145/282 (51.42%), Query Frame = 0
Query:  395 AAWSREQLDILREIELVAAGGGMARGKAAAALESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKNGKQA-----RFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVL 671
            A W RE LDI+R +E+ AA   + RG AAAA+  LGY PT   A  LL D+ FWS                                     +         GW FPP +LDEA+ +R ++RRRR     G     + R   L  + G     V+ +D+  +RFLDDA +++  +          R  +HI DVD VV  G+ +D LARERG SLYLP RPLHMLP AAME A FS  LPT  + +++D ++   +++ W++F ++V PV+R+ Y  F+A L
Sbjct:   42 ALWKREHLDIVRALEIAAASAAVPRGAAAAAMSGLGYTPTATEAARLLRDIGFWSAEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSDG--VTAGWTFPPDVLDEARRLRAAARRRRVGFATGATAVGRGRRNCLAGRGG-----VWAVDDPAARFLDDAITIRRVRAKSVGDRDVWRVTVHIADVDAVVSVGTAMDTLARERGESLYLPARPLHMLPAAAMEGAGFSKDLPTETVAVQMDVDVGARALVDWDVFAAVVGPVRRVTYDGFNAAL 316          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A7S0ZJC8 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJC8_9RHOD)

HSP 1 Score: 157 bits (398), Expect = 7.750e-39
Identity = 114/356 (32.02%), Postives = 181/356 (50.84%), Query Frame = 0
Query:  494 ENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSV-QLFKNGKQARFFL---HITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVLSDDAQARDIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYVARCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARR 845
            E    +FP  IL++A+ IR S    R  +T     RE+   R      GQK   V+CID+  + F DDA S  ++ + GK  RF +   HI DVDE ++P SD+D +A++R  S+YLP  PLHMLPP  MEA SF+    + A+T+++  + E+  +  + I  + +PP   + ++Q     +  A  R       ++L L+ +    L+     R  R K+  +R+D   + A+             +++ +K               ++    H  +D IL  AG  IR+FA+   V+LPE R +  +  RCGTAP+R+Y DL +QRQIKS++ G+    + +M  L  WL +R
Sbjct:   20 ERVSLSFPVHILEDARVIRESILNHRRAIT-----REKSARRGFESYFGQK---VFCIDDAVANFRDDAISCSEIEEFGK--RFLVVSVHIADVDESIEPDSDLDAIAKDRAQSIYLPAGPLHMLPPVLMEALSFNAEYASEAVTVRMLIDPESGQVEHYSIKLTYLPPATILTFQQ-----ASQAAKRT------KELNLMLEAGDALS-----RYGRGKRNKNRSDYMSVRAT-----------GAQVVVEK---------------YEFSDIHKAMDEILNLAGNCIRRFAKSKKVFLPERRGSQFFALRCGTAPMRKYMDLAVQRQIKSIIKGQSVGTQEEMVALNKWLEKR 323          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A7J7IKD0 (RNB domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKD0_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 2.190e-29
Identity = 168/632 (26.58%), Postives = 261/632 (41.30%), Query Frame = 0
Query:  339 AGILIASDTSRFKRAAA-GSGWRALPPSVVESRNRCSFLDLCKMIIENPTDGDIRRPAAWSREQLDILREIELVAAG-------------GGMARGK-----------AAAALESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFK--NGKQAR----------FFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDF-----ELETES----ILAW-EIFPSIVPPVKRINYKQFDAVLSDDAQARDI-GQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMD-SKSIAS--------VRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQ------------FAR-------QNTVYLPEGRDAASY-VARCGTAPLRRYADLTIQRQIKSVLFGKEPAG---RRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVLRGIVRNV 890
            A +++ +D  RFKR      GWRAL   +V  R   SF        E       +    W  E L +LRE+E++AA               G   G            AAA    L    + + A  LL+DL  W++    +D+                                     N   AFP +++  A+ +RT                + +  R  +Q      L  +C+D   +R LDDAFSV++ +  +G  A           + +HI DV   +  G  +D++A +R  SLYLP RPLH+LPP    AASFS  LPT A+T+ + F     E  TE      + W ++  S+VPPV RI+Y+Q D ++  + +AR   G+ +  D R    +    +N++   R+              W S   L    K++AS        +R+  ++ KS+ +   VA   D     A   +    +A+  LIR             +AR       Q +  +P G+ +A+Y   RCGTAPLRRY DL   RQI   L   + A    R Q+  + A + R  S   + VT  R+  + + L+   AQ  ++  ++  ++RG+V  V
Sbjct:  264 AALMLGADVFRFKRVPRLCGGWRALSEPLVRVRVVESFC-------ERACSPTRQANQTWHPEHLAVLRELEMLAASRHDTRKAPEAMLVNGNESGSVASRLTHLYPLAAAVCRRLERDLSPNSAMSLLVDLGQWTSNVSTSDSXXXXXXXXXXXXX----------------XXXXXXXRNTIAAFPDTVMAAARALRT----------------QLLSERTRMQPSVANTLLAFCVDSSSARILDDAFSVEVEQESDGSSAHLPGERLARVTWHVHIADVGCWLPAGHPVDQVASQRAQSLYLPGRPLHLLPPPLANAASFSEHLPTNAVTVSLRFTEPSLEERTEQRRLGTIEWFDVRRSVVPPVLRISYEQLDHLILTNWRARSTAGRSDAADART---VETTTSNEVSEARV--------------WISADHLQTLRKALASPALEHRMRIRMHSRQSKSAGRVAQVAHRRDGSLAVAEFALSPGYSASEALIRYALKHSIPVPLTGWARVQELDVDQPSEIVPNGKTSAAYRPQRCGTAPLRRYLDLVTLRQISLYLDHGDAAPLLTRAQVARISAQVQRNASKGMQKVTASRQLLMMDVLAERQAQAQSLGLAEL-IVRGLVLEV 838          
BLAST of Ggra5192.t1 vs. uniprot
Match: M1V973 (Probable ribonuclease R n=2 Tax=cellular organisms TaxID=131567 RepID=M1V973_CYAM1)

HSP 1 Score: 125 bits (314), Expect = 1.370e-25
Identity = 169/660 (25.61%), Postives = 261/660 (39.55%), Query Frame = 0
Query:  339 AGILIASDTSRFKRAAA-GSGWRALPPSVVESRNRCSFLDLCKMIIENPTDGDIRRPAAWSREQLDILREIELVAAGGGMARGK-------------------------AAAALESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWA-FPPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKN-------------GKQARFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELET-------ESILAWEIFP---SIVPPVKRINYKQFDAVLSDDAQAR-------------------------------DIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPE-----------GRDAASYVA-------------RCGTAPLRRYADLTIQRQIKSVL-FGKEPA--GRRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVLRGIVRNV 890
            A I + SD  RF+R    G GWRALP  +V +R   SF   C+ +  + T   + R   W  E L +LRE+E++AA     R                           AAA    +    + + A  +L+ L  W+    +T  +    P   +K               R N  P  K   +  A FP +++  A+ +R+     R L      +R    H+             +C+D   +R LDDAFSV++ +                Q  + +HI D+   +  G  +D++A +R  SLYLP RPLH+LPP    AASFS  L T AIT+ + F   +       + + A E F    S++PPV+RI+Y++ D ++  + + R                                + Q     L +L K     A  L+ R   R     R +  ++                R+  ++D S +       V +F     + +VDA+L AA   + +FA Q+ + +P            G  AA  V              R GTAPLRRY DL   RQI   L +G E     R Q+  + A + R  SA  + V   R+S + + L+   +Q   + G    VL G+V +V
Sbjct:  271 AAITLGSDNFRFRRVPRYGGGWRALPEPMVRARIVESF---CERV--HATRQSLDR--TWHPEHLAVLRELEMLAASRSEHRRNLEPSLRTKRQGMSAPSTRLERLYPLAAAVCRRVASEVSPNTAISILVKLGQWTLS--ETSKESASTPPATLKR--------------RPNVCPEPKIGQKIIAAFPDAVMTAARALRS-----RILSGRTRNQRSVWSHQF-----------AFCVDSSSARILDDAFSVEIEQRCDPSSGASGHRPGDLQVTWHVHIVDIGRWLPAGHPVDQIACQRAQSLYLPGRPLHLLPPPLANAASFSEHLATDAITVSLRFRERSNDQHTGSDDLGAIEWFTVRRSVIPPVQRISYEELDRLILSNRRVRASSXXXXXXXXXXXXXXXXXXXXXXXXXXXETLLQRASNPLTILQKALNSAA--LEQRMRARMHARQRRNAGRI---------------ARVAHRRDGSLA-------VAEFALSPGYCLVDALLAAASEALIRFAAQHKIPVPVTRWTRVQNTELGTLAAQKVTASEPNAVQAYRPQRFGTAPLRRYLDLMTLRQISLYLEYGAEAPLLTRAQVARIAAQVQRNASAGMQKVVASRQSLMLDVLAERQSQVQRL-GPGELVLNGLVASV 866          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A6H5JKX1 (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.870e-23
Identity = 101/340 (29.71%), Postives = 162/340 (47.65%), Query Frame = 0
Query:  548 VYCIDEKKSRFLDDAFSVQLFKNGKQARFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVLSDDAQARDIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYVA----RCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARRHSASERTVTERRRSALFESLSAHCAQQSAVAGSDFAVL 883
            VYCID   +RFLDDAFSV    + +    F+HITDV  +V  GS +D++AR R  S YLP  PL M+PP A++A SFS      A+T+ I  + +T  + +  +  + +PP   + + Q D +L    +A + G  E  D RL A++A         + ++  +   R   +     ERG    K        ++     ++++ VA           ++VD +LT     + +  ++  V +P        VA    R GT PLRRY D+  QRQI ++L G     ++ + E   +L  R + +  +  E       E+L+AHC  Q+   G + AV+
Sbjct:  494 VYCIDGAGTRFLDDAFSV----DPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLL----EATEKG--ETGDGRL-ARVA---------KEIQALEYVGRRSAEASGRRERGREGVK-------FRKGAGGETQALEVAA-------SRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVV 799          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A482SRG6 (RNB domain-containing ribonuclease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRG6_9ARCH)

HSP 1 Score: 115 bits (289), Expect = 1.220e-22
Identity = 172/756 (22.75%), Postives = 284/756 (37.57%), Query Frame = 0
Query:  141 SEGPYC-QTQVPIVPVRPLSD---PFCSAHSHGETTVSNPRCTLVEESANCALKPASTSSENWTEKLNTGSVLEVWSKGEIRFA-YVCSVSERTIGVNFVEFPNNDDFTSQESKISFGEVISIWPK---SITPPSPKDLASTVEMGLNFLRNSPPRSLDLSNTYNSMRRIPKGNPEALQDSYQIAL----------------SHFSLPASAAPKRHGAVTAAAGILIASDTSRFKRAAAGSGW--------------------------------RALPPSVVESRNRCSFLDL--CKMIIENPTDGDIRRPAAWSREQLDILREIELVAAGGGMARGKAAAAL--ESLGYHPTDDGATHLLLDLEFWSTGPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAFPPSILDEAKEIRTSSRRRRALLTAGEAEREQMR--HRRLLQKVGQKPLRVYCIDEKKSRFLDDAFSVQLFKNGKQARFFLHITDVDEVVKPGSDIDELARERGMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWEIFPSIVPPVKRINYKQFDAVLSDDA-----QARDIGQDELEDLRLLAKIAPYLANKLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKSVPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEG---RDA--ASYVARCGTAPLRRYADLTIQRQIKSVL 824
            S  P+   T+ P +PV        P        ET   N    + E S     K   T     T  + TG++LE+   G + FA ++C   +    +  V   +    T     +   +V+S+W     S  P  P+  A+     +  LR+ P R LDL   +   + I   NP    DS  +A+                S+F + A AA +R+ A +     L++ D   F+R A+   W                                RA   SVV +    +F      +   +    G+  +  + +   L  LR +EL +          A  L  + LG   +  GA  LL++++  S           ++ GV+           S +  S D    S +     W   PS+L+ A ++     +RRA + A    +   R    R+  +       V CID K + F DDA S+      +     +H+ DV   ++   ++ + A+ER  S YLP   +HM PP A+EA +FS+  P  AIT     +  + S+L + +FPSI+ PV   +  Q + ++   +     Q   +  + ++DL LL  I   +                    +  W           IA+V+     D   SK   V ++   +S  AH +++A L+        F   N +  P     RD   +S V R    PLR +     QRQ+++ L
Sbjct:   64 SRAPFATSTKTPNIPVMSAFGRYFPSDIGSDDEETEYDNEESIMEERSKAPPKKLVET-----TTVVQTGTILEIVHNGHLLFANFLCKKEDSNAII--VTLSSGKQIT-----LDLAQVVSVWDHLADSQPPQDPESWAAVSTKAMELLRSLPSRKLDLVEFW---QLIVTRNPTLPIDSIDLAVYLFQEKVFKSWIDPARSNFQVYAIAAAQRYVAAS-----LLSKDKVHFRRRASRKSWPEEAYGAVVPEDQSYVYTPNEDEVEYIIEGAYRAFSESVVINTEVTAFEAYYHSRRTGQQDAQGETEKKTSQAPSILRHLRALELYSMQPSAVPPPQALKLILKRLGQDASPSGARALLVEMKHAS-------GSYALRTGVD-----------SGVMSSGDMQGESVRFHVASWQ--PSVLEAATKLSEDQAKRRAAIQADAGRKYGKRGYQGRIDLRASSASHPVMCIDAKSATFFDDAISLC----PETGELLVHVIDVTGALRAHPELQQTAKERISSEYLPNGAIHMFPPKALEALTFSSKEPNEAITAAFKIDYASGSVLDYRVFPSIIGPVVSFDIDQANTIIEAKSSGSKNQVWPVATEAVKDLELLHDIGSRIVK------------------NNPWL----------IANVKNRMLLDSRVSKKTGVMKIGFEESSPAHHIINACLSLYANATYHFCSSNNLPTPVAFVNRDTVNSSVVRRFAAHPLRNWISQQQQRQLRAAL 747          
BLAST of Ggra5192.t1 vs. uniprot
Match: A0A7S0ZJH1 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJH1_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 7.910e-14
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0
Query:  212 WSKGEIRFAYVCSVSERTIGVNFVEFPNNDDFTSQESKISFGEVISIWPKSITPPSPKDLASTVEMGLNFLRNSPPRSLDLSNTYNSMRRIPKGNPEALQDSYQIA--------LSHFSLPASAAPKRHGAVTAAAGILIASDTSRFKRAAAGSGWRALP 363
            W   ++ F     V E++     +   ++ + +S   K S  E+ISIWP  +   S  +  S  ++  N + NS PRSL LS  +  +    K + ++  +S Q+A        L+H SL A            A+ +LI+SDT RFKRAAAG GWRALP
Sbjct:    1 WKDKKLVFVTPLEVGEKSFSFQILGSDSSSESSSDVQKASIDEIISIWPNRLWC-SKTEFQSQFQIASNLIANSTPRSLSLSEIHTELSSYGKNHSKSTLNSVQLAQRLAEHGILNHHSLLAR---------VVASALLISSDTVRFKRAAAGKGWRALP 150          
The following BLAST results are available for this feature:
BLAST of Ggra5192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J8485.530e-26952.46DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YVF86.960e-8229.93Putative ribonuclease n=1 Tax=Porphyridium purpure... [more]
A0A7S1TNE96.390e-7129.01Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A1X6NHZ02.840e-4436.88RNB domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A7S0ZJC87.750e-3932.02Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7J7IKD02.190e-2926.58RNB domain-containing protein n=1 Tax=Cyanidiococc... [more]
M1V9731.370e-2525.61Probable ribonuclease R n=2 Tax=cellular organisms... [more]
A0A6H5JKX11.870e-2329.71RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A482SRG61.220e-2222.75RNB domain-containing ribonuclease n=1 Tax=archaeo... [more]
A0A7S0ZJH17.910e-1433.13Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..114
NoneNo IPR availableCOILSCoilCoilcoord: 978..980
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..499
NoneNo IPR availablePANTHERPTHR23355:SF42EXORIBONUCLEASE II, MITOCHONDRIALcoord: 490..961
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 490..961
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..980
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
IPR001900Ribonuclease II/RSMARTSM00955RNB_2coord: 529..826
e-value: 2.3E-15
score: 67.1
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 546..786
e-value: 7.6E-32
score: 110.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 543..851

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:720703..724604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5192.t1Ggra5192.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 720703..724604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5192.t1 ID=Ggra5192.t1|Name=Ggra5192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=981bp
MNRVTRNLKTRQISVQRSIRTRRISLMAWGIPTPLLISLTLEANPDFQAF
VAQFVDAAYSNNIRMAAGVSALMEKFDHLKQYICNKLEDLERKIVSVEKK
VEEAGAELRNHIRQCPLRPRQETMSFNAVPGHVGYRQDGMSEGPYCQTQV
PIVPVRPLSDPFCSAHSHGETTVSNPRCTLVEESANCALKPASTSSENWT
EKLNTGSVLEVWSKGEIRFAYVCSVSERTIGVNFVEFPNNDDFTSQESKI
SFGEVISIWPKSITPPSPKDLASTVEMGLNFLRNSPPRSLDLSNTYNSMR
RIPKGNPEALQDSYQIALSHFSLPASAAPKRHGAVTAAAGILIASDTSRF
KRAAAGSGWRALPPSVVESRNRCSFLDLCKMIIENPTDGDIRRPAAWSRE
QLDILREIELVAAGGGMARGKAAAALESLGYHPTDDGATHLLLDLEFWST
GPVQTDAKKGVKPGVEIKNLKSEPSRKSSLDVSRDNSTPSKKPENRGWAF
PPSILDEAKEIRTSSRRRRALLTAGEAEREQMRHRRLLQKVGQKPLRVYC
IDEKKSRFLDDAFSVQLFKNGKQARFFLHITDVDEVVKPGSDIDELARER
GMSLYLPLRPLHMLPPAAMEAASFSTTLPTTAITIKIDFELETESILAWE
IFPSIVPPVKRINYKQFDAVLSDDAQARDIGQDELEDLRLLAKIAPYLAN
KLDNRRLRRKQKTDRNDLDKLWASERGLMDSKSIASVRLIKQKDKSSSKS
VPVARVIDFQSHGAHAVVDAILTAAGTLIRQFARQNTVYLPEGRDAASYV
ARCGTAPLRRYADLTIQRQIKSVLFGKEPAGRRQMTELRAWLARRHSASE
RTVTERRRSALFESLSAHCAQQSAVAGSDFAVLRGIVRNVTITKSSTLRV
DVTLEGTGLSTIVSVSGLLLTNILKLSQAEENNGKGTKRTQMILAAATSI
MAPGSRVRVQILNIDTSARTIKGAAFDLVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold