Ggra5129.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5129.t1
Unique NameGgra5129.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1469
Homology
BLAST of Ggra5129.t1 vs. uniprot
Match: A0A2V3J8L6 (FANCI_S2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8L6_9FLOR)

HSP 1 Score: 1571 bits (4069), Expect = 0.000e+0
Identity = 856/1488 (57.53%), Postives = 1092/1488 (73.39%), Query Frame = 0
Query:    1 MSSADNADVIGNVVRTFESDASTGATQGLLRSMQSTTLTSIIGSICNPPPHISPNRLLRALWSAPTLRPTILTSLAEAMASKFTDVDASLLEEIDFLLVADAKNPSQPHDRRLKEISLCASCIAKQSKEVYSPVHGPLLVYCARAASMINTAQGSDVRTKILQFLLLSMCDDENIAVQAVIALLENELDFAEEEEKVMMNIILRFVSTNCLEGDLPDILRAILFSLTKTNSSHKTYVLSWLVFVIIQRAAGDVLTEVINVVDVMVLDSELVCDRVANAFWSVLNYSSREEHSAQKRFRFCPSHVAVLYCILSNASTEAQQEYLYYILERMLLDPSVSFDISTAASSSSSAGDEDFRRKAVFVESIKILAVQNRCQTILEFYEGLLWKSKKYQEWGSLMLLELFVWVSESRRSILNIIFGTIVQTETADYTVNAFCALYERIACTPRSAFALRECHGGLKEALELISLLPASYDCRILKASVPIFVTCPNLTDSMIMYLRKAAGSRSRKFQVIACTGLLTTLEQSFISNETSQTCSKTLKLMMETTDITVKSHLITNVLKFIRRKPEYTGRILSLSELLMKQFMVVLQSPGGHSGGGDCIGQTEGASEQRPDASLSITNCFGHIYGEYILKEPVSLLAKFCLSISIEEETMMRHMKRYVQYLGNEFGALLDVCSVSQSKPPVSPRVKTLCEQFEVLFGTRLSKVGVNHCLAYGLSLIIRDHLEGRSHPGKQSN-ESAKQGSSQSPQFALITAREAVSKVHSSSLQPTLSESVTFGERLEALSILEGIREGEEVTSILKKKICSEVLRRLRQDLKAGLLDDGDRAPKANHMKEMISTLCSLYHANCPWLL--------KPDSRAYQENAPCLRRNAGIGSSNSRSDEREHDG--QQDVSVALYRRVASHSHLPNDIRRAIELRQLQFLGPSLSIAIRHSVLSILIILCSFGCLENEMETFVQLLQPAAENVGATTKDMGEEKPSLPHRLGDPKDDERSAAVAKVTHLVLRTIRLEFANSMSVGLTLTYMELVSLVIQMVRSRGDACLKGIGNLVFTSMTDILREYSVRHVSVLREMLRLCLRCLERSAALQFSRRILVWLGNSSSLLNSRFSVDDIEDNRLKVMEFDADIVAEGMALDAEISDEDSGEEDENSTKPRRSLNVNKNGSEVEAHTVEKRASKSADGNQSDITEGDAHRSTQESGSP---------TPGDKSIKSLCLDETAEVGLLSIVTVLGYCQEIVTHDVHAHRFMVREDRDSMSVPTPSEESYSVQIASILKDFCNTSFAKLVSPKQRAWPDVLVKKIDFILHGLLECAELKLRLAVKAARRDAGARRCTPVFRAALSTLQSLYDESTTKSSVFATAKAMSRLNKVSLEERLRTTSLEVSQVVREKSEAFDESAPKEWKAMLKIITSGSST-SISRALGTLGKEASAGVSEHIRVSHPRKRQRLRSRNSGIDHWLQDEKGDDNYADLEDFIVPMDATE 1467
            MS   + DVI  +V  FES +ST AT+  LRS+ S T++S+I SI +PP  +S  RLLRALWSA  LRPTILT+LAEA+ASKFT+ D+ LLEEIDFLLVADA++ ++ HD R+K+IS CA+ IA+ S+++YSP+HGP+LVYCARAAS++NT Q  DVRTKILQFLL+SM  ++ IAVQAVIALLENE+D  +EEEK+MMNI+LRFVST C E DLPD+LRAIL+SL+KT+SS K +VLSWLVFV IQR++ D LT+VINV+DVMVLDS++VC+R+A AFWSVLNYS+R + +++K FRF PSH+AVLYCILS+AS+E Q EYLYYILER+L+DP++SFDISTAASSSSSA DEDFRRKAVFVESIKILAVQNRCQTILEFYE LLWKSK +QEWGS MLLELFVWV ESRRSILN+IFGTIVQ+ETA++ ++AFC LYERIA TPRSAF LREC G LKEALELISLLPA+YDCRILKASVPIFVTCP+L+DSM+++LRKAA SRSRK+Q+IACTGLLT L Q  +S++  + C +TL+LMMETTD+TVKSHLI ++L+FI RKPEY+ R  SL E+L+  F  + Q    H+   +     +  S Q  +  L +TNCFG   GEY+LKEPV LLAKFCLS   +++ +   M+R++ YLG+  G L D     +SK PV PRVKTLC+  ++L  +    VG  H  AYG+SLI+RD+LEG++    +SN E  K GS+   QFA + AREA   +H+SS QP LS++ TF ERL+AL  +E   E +E+T ILKKK+CSE+LRRLR D+K GLL+D ++ PK   +KEM+  L SLY  NC W L             A  E+  C   N G       S  ++ D   Q+  +  LY  + SH HLP D+R+AIE+R +Q  GPSL I IR++ LS+LI LCS+G + +E++TF +LL P A+ +        E K +   +   P D     A  +V  ++L  +RLEFANSMSVGLTLTYMEL++  +Q +R++ +   +  G  VF+++TDILREYSVRHV+VLREMLRLCL+CL+R+AA+ F R +L+WLGNSSSL+NS+FS DD+ED +L VM+FDADIVAEG+ALD   SD + G+ DE     RRS    K+      H                    D H +T++   P         +   K+I SLCLDETAEVGL+SIVT LG+CQ ++ H+V  HRF+ +E+R+ + +    E   SV IASILKDFC+TSFAKLVSPKQ+AWP VLV+KID+I+ GL+ECAE+KLRL +KA RR++  RR  P+F+ A+  LQ+LYDE T +SSVFA   A SRLNK S EERL+ TS+EVSQV+R+K E  DES  KEWKA++K +  G +  +I + LG + K+ASA   +H+ VSHPRKRQRLRSRNSGID WLQ+E+GDD++ADLEDFIVPMDATE
Sbjct:    1 MSLEGDVDVITGIVHAFESGSSTDATELFLRSLPSATISSVIRSIRSPPSSVSSTRLLRALWSAAPLRPTILTTLAEAVASKFTNADSYLLEEIDFLLVADARDTARGHDVRVKDISTCATAIARHSRDIYSPIHGPILVYCARAASIVNTIQARDVRTKILQFLLMSMQSEQTIAVQAVIALLENEIDIDDEEEKIMMNIVLRFVSTQCTESDLPDVLRAILYSLSKTSSSQKAHVLSWLVFVSIQRSSRDTLTDVINVIDVMVLDSDVVCERIATAFWSVLNYSNRGDAASRKNFRFSPSHIAVLYCILSDASSEGQHEYLYYILERILVDPAISFDISTAASSSSSASDEDFRRKAVFVESIKILAVQNRCQTILEFYESLLWKSKNFQEWGSTMLLELFVWVPESRRSILNVIFGTIVQSETAEHILDAFCTLYERIATTPRSAFVLRECQGVLKEALELISLLPATYDCRILKASVPIFVTCPSLSDSMLIFLRKAASSRSRKYQIIACTGLLTFLSQQVVSDDVVRGCCETLQLMMETTDVTVKSHLIIHLLRFIERKPEYSTRTKSLDEVLLNHFKSMYQRQAKHTKSSESSTNKQIGSTQDENL-LDLTNCFGEFCGEYVLKEPVCLLAKFCLSKQCDDKKIQHFMERHIAYLGSHTGGLSDATLHGRSKVPVLPRVKTLCDLLDILLSSASGSVGEQHLSAYGISLIVRDNLEGKTSLHSKSNGEVLKAGSNLLVQFASVAAREASFGLHNSSSQPMLSDAFTFRERLKALKAVEHKTEDDEITRILKKKVCSEILRRLRVDMKDGLLEDPEKFPKRQEVKEMVDVLGSLYTENCSWRLTHLTVPSLSSHLEALDESNHC---NGGHSPEKILSVSKKDDDSTQEPRTAGLYHHLLSHVHLPADVRKAIEVRNIQNQGPSLCITIRNAALSVLICLCSYGYIADELQTFSELLAPFAD-LHVVKSRSAEAKRAETSKDCTPADQWVKTA-DRVVCILLNIVRLEFANSMSVGLTLTYMELIAFFMQTIRTKREDYFREAGTQVFSAITDILREYSVRHVTVLREMLRLCLQCLDRTAAMDFIRGVLIWLGNSSSLINSQFSRDDVEDEKLNVMDFDADIVAEGVALDTRHSDREKGD-DEEPDDTRRSAQEKKDEVXXXXHXXXXXXX---------XXXXDKHGATEKQSDPRRFQTLPSLSSESKTITSLCLDETAEVGLVSIVTFLGHCQSVIAHEVQEHRFLTKEEREVVPLLHRVEGCDSVHIASILKDFCSTSFAKLVSPKQQAWPGVLVRKIDYIVLGLIECAEIKLRLVLKAIRRESAGRRLKPLFQDAVCILQNLYDE-TAESSVFAAENATSRLNKTSQEERLKNTSVEVSQVIRDKMETLDESTLKEWKAVVKGLNKGGTNRAIGKTLGAITKDASA---DHVHVSHPRKRQRLRSRNSGIDGWLQEERGDDDFADLEDFIVPMDATE 1468          
BLAST of Ggra5129.t1 vs. uniprot
Match: R7QLZ6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLZ6_CHOCR)

HSP 1 Score: 259 bits (661), Expect = 8.650e-67
Identity = 310/1267 (24.47%), Postives = 542/1267 (42.78%), Query Frame = 0
Query:  266 LDSELVCDRVANAFWSVLNYSSREEHSAQKRFRFCPSHVAVLYCILSNASTEAQQEYLYYILERMLLDPSVSFDISTAASSSSSAGDEDFRRKAVFVESIKILAVQNRCQTILEFYEGLLWKSKK-YQEWGSLMLLELFVWVSESRRSILNIIFGTIVQTETADYTVNAFCALYERIACTPRSAFALRECHGGLKEALELISLLPASYDCRILKASVPIFVTCPNLTDSMIMYLRKAAGSRSRKFQVIACTGLLTTLEQSFISNETSQTCSKTLKLMMETTDITVKSHLITNVLKFIRRKPEYTGRILSLSELLMKQFMVVLQSPGGHSGGGDC-------IGQTEGASEQRPDASLSITNCFGHIYGEYILKEPVSLLAKFCLSISIEEETMMRHMKRYVQYLGNEFGALLDVCSVSQSKPPVSPRVKTLCEQFEVLFGTRLSKVGVNHCLAYGLSLIIR--DHLEGRSHPGKQSNESAKQGSSQSPQFALITAREAVSKVHSSSLQPTLSESVTFGERLEALSILEGIREGEEVTSILKKKICSEVLRRLRQDLKAGLLDDGDRAPKANHMKE-MISTLCSLYHANCPWLLKPDSRAYQENAPCLRR--------NAGIGSSNSRSDEREH--DGQQDVSVALYRRVASHSHLPNDIRRAIE----LRQLQFLGPSLSIAIRHSVLSILIILCSFGCLENEMETFVQLLQPA---------------AENVGATTK---DMGEEKPSLPHRLGDPKD---------DERSAAVAKVTHLVLRTIRLEFANSMSVGLTLTYMELVSLVIQMVRSRGDACL--KGIGNLVFTSMTDILREYSVRHVSVLREMLRLCLRCLERSAALQFSRRILVWLGNSSSLLNSRFSVDDIEDNRLKVMEFDADIVAEGMALDAEISDEDSGEEDENSTKPRRSLNVNKNGSEVEAHTVEKRASKSADGNQSDITEGDAHRSTQESGSPTPGDKSIKSLCLDETAEVGLLSIVTVLGYCQEIVTHDVHAHRFMVREDRDSMSVPTPSEESYSVQIASILKDFCNTSFAKLVSPKQRAWPDVLVKKIDFILHGLLECAELKLRLAVK--AARRDAGARRCTPVFRAALSTLQS----LYDESTTKSSVFATAKAMSRLNKVSLEERLRTTSLEVSQVVREKSEAFDESAPKEWKAMLKIITSGSSTSISRALGTLGKEASAG----VSEHIRV---SHPRKRQRLRSRNSGIDHWLQDEKGDDNYADLEDFIVPMDA 1465
            +DSE+V  R+ +A   ++   +  E     + +  P HV+++  +LS+ ++++ ++ ++ I ER+     V FD S   SSS++  +  F     F+   +I AV    +T+   +EG +W  ++  +  G  ML E+F+ V  SR+ IL  I   +   +T     +AFC L E+I     +A  LR     L   L     +P   D R++ A   + V  P  +D +I +LRKAAGSR  K Q IA  G L  +E   I  ET +        ++  ++  ++++LI  +L+++ R   +  RI ++++++++            +   +C       +    G   ++P A    T    H +G        +LL + C  I      +      + +YL +    L D+ S  + +     RV  +CE ++    +  S+    +   Y + L+IR  +    RS    + N+   + +        ++AREAV+   S + +  ++ +V+F E +E +  L        +  IL ++  S V  R+RQ      L   +    A  +K   IST         PW        +   +PC            A + SS  +S    H  D ++ V VA +  + S + +  +I+ A +    + QL  L  SL ++IR S +++LI         + +     +LQ A               A+  G  T    D  E  P++        D               + + T ++ R  RLEF + +SV LTL+Y +L    I + +  GD C   K    ++ ++M+ +LR++S+R  +VLR ML L L C +    ++F+  ++  L +  +L + R  V       +   +FDADI+ E + LD E+     G ++ N  +P                       K  D     +T      S Q+   P     SI++LCL ET +  ++SI  VL Y    V H +   R      +    VP  SE + +  +   L++     F +   PK      +L +++  I+  L E  E+++RL      A+++ G       FR  L  +Q     L++E   K ++ +      R   V L+ERL  T+   + V+  + EA    +P     +L +          + +G+L + A+      V  H+R    S P+KR   RSRN  +D WL++E GDDNY DLEDFIVP++ 
Sbjct:    1 MDSEVVASRLVDALSHLVQLQTTGETLTCTQPKVGPPHVSLILSLLSSTASQSVEKRIHDIFERIATPGVVRFDNSQVPSSSAATSEPPFVSALRFIARKQIPAVWAHGETLACVFEGQVWSEQESIRSCGMRMLFEVFLLVPRSRKKILRAILVALTNEDTPQLVTDAFCHLLEQICGARETAIHLRAYALDLHALLNFADAIPMRADWRVVTAIARLSVDNPQQSDRVISFLRKAAGSRLLKLQRIAGAGFLALIEHDAIPEETREEVLIAFADILALSETPLRNYLIQMMLEYVDRNGSHPPRIRAIADIVVQHV---------RNSSMECSFCDRKSMQAATGKGTEKPVAFGQSTFLEPH-FGLCCSGFDAALLMRLCRRIGAHHSPLASFYWDFGEYLCDVKQVLKDIYSKPEKQGSTIDRVTKVCELYQTRICSDTSRSSERYLSGYAVCLLIRAVEESNNRSETSSRHNKRYARSNGSFAVLGSVSAREAVAMGLSEAFKNNITGAVSFKECIEGMRWLANASANVLLRRILFREFMSIVGSRIRQPALLPRLTLEETETFAGLIKNWFIST--------SPWATTESE--HSPESPCSANAHTRAEDWQATLLSSKKQSSFSAHPWDCKECVDVATH--ILSEAGIA-EIQSAWDSETAVSQLTKLSTSLRLSIRSSCMTLLIRTIQDWSPADRLALLHSILQAARPLEIVEAASDSTNHAQGSGKQTDSEFDTSECNPAVKEIHSKDMDCNSQVNGSHSPEGLKILQSTTVLSRVFRLEFQHGISVALTLSYFDLF---IWLRKEAGDDCESEKQTRAIIVSTMSGLLRDFSIRQSTVLRRMLSLLLDCFDVLQGIEFATVVVRCLRDGIALDDRRGEVI----GTIGTQDFDADIIEEAINLDIEMR----GIDNTNVCRP-----------------------KHQDAGHLSLTNKQNLGSEQDEAGPDTD--SIRTLCLGETEDNAVMSIFCVLEYLSRTVRHVLERRR----RTKSKSYVPPESELTSTRGVVGALRELFVAPFMRFSVPKTNQTMLLLWRRLGVIMQSLTEFVEIQIRLLPTHMCAQQEPGHP-----FRGLLDLVQDVLKLLFEEGHLKWTLSSPQLIEQRPRSVLLQERLDATA--TAFVLCHEIEA----SPSLTGILLLL------QERVKDIGSLKRNANEKSKNWVGVHVRPDFQSRPKKRAHFRSRNRYVDGWLREENGDDNYVDLEDFIVPLEG 1187          
The following BLAST results are available for this feature:
BLAST of Ggra5129.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J8L60.000e+057.53FANCI_S2 domain-containing protein n=1 Tax=Gracila... [more]
R7QLZ68.650e-6724.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1197
IPR029315FANCI solenoid 2 domainPFAMPF14676FANCI_S2coord: 389..518
e-value: 2.3E-11
score: 44.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:547450..551856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5129.t1Ggra5129.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 547450..551856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5129.t1 ID=Ggra5129.t1|Name=Ggra5129.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1469bp
MSSADNADVIGNVVRTFESDASTGATQGLLRSMQSTTLTSIIGSICNPPP
HISPNRLLRALWSAPTLRPTILTSLAEAMASKFTDVDASLLEEIDFLLVA
DAKNPSQPHDRRLKEISLCASCIAKQSKEVYSPVHGPLLVYCARAASMIN
TAQGSDVRTKILQFLLLSMCDDENIAVQAVIALLENELDFAEEEEKVMMN
IILRFVSTNCLEGDLPDILRAILFSLTKTNSSHKTYVLSWLVFVIIQRAA
GDVLTEVINVVDVMVLDSELVCDRVANAFWSVLNYSSREEHSAQKRFRFC
PSHVAVLYCILSNASTEAQQEYLYYILERMLLDPSVSFDISTAASSSSSA
GDEDFRRKAVFVESIKILAVQNRCQTILEFYEGLLWKSKKYQEWGSLMLL
ELFVWVSESRRSILNIIFGTIVQTETADYTVNAFCALYERIACTPRSAFA
LRECHGGLKEALELISLLPASYDCRILKASVPIFVTCPNLTDSMIMYLRK
AAGSRSRKFQVIACTGLLTTLEQSFISNETSQTCSKTLKLMMETTDITVK
SHLITNVLKFIRRKPEYTGRILSLSELLMKQFMVVLQSPGGHSGGGDCIG
QTEGASEQRPDASLSITNCFGHIYGEYILKEPVSLLAKFCLSISIEEETM
MRHMKRYVQYLGNEFGALLDVCSVSQSKPPVSPRVKTLCEQFEVLFGTRL
SKVGVNHCLAYGLSLIIRDHLEGRSHPGKQSNESAKQGSSQSPQFALITA
REAVSKVHSSSLQPTLSESVTFGERLEALSILEGIREGEEVTSILKKKIC
SEVLRRLRQDLKAGLLDDGDRAPKANHMKEMISTLCSLYHANCPWLLKPD
SRAYQENAPCLRRNAGIGSSNSRSDEREHDGQQDVSVALYRRVASHSHLP
NDIRRAIELRQLQFLGPSLSIAIRHSVLSILIILCSFGCLENEMETFVQL
LQPAAENVGATTKDMGEEKPSLPHRLGDPKDDERSAAVAKVTHLVLRTIR
LEFANSMSVGLTLTYMELVSLVIQMVRSRGDACLKGIGNLVFTSMTDILR
EYSVRHVSVLREMLRLCLRCLERSAALQFSRRILVWLGNSSSLLNSRFSV
DDIEDNRLKVMEFDADIVAEGMALDAEISDEDSGEEDENSTKPRRSLNVN
KNGSEVEAHTVEKRASKSADGNQSDITEGDAHRSTQESGSPTPGDKSIKS
LCLDETAEVGLLSIVTVLGYCQEIVTHDVHAHRFMVREDRDSMSVPTPSE
ESYSVQIASILKDFCNTSFAKLVSPKQRAWPDVLVKKIDFILHGLLECAE
LKLRLAVKAARRDAGARRCTPVFRAALSTLQSLYDESTTKSSVFATAKAM
SRLNKVSLEERLRTTSLEVSQVVREKSEAFDESAPKEWKAMLKIITSGSS
TSISRALGTLGKEASAGVSEHIRVSHPRKRQRLRSRNSGIDHWLQDEKGD
DNYADLEDFIVPMDATEQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029315FANCI_S2