Ggra5117.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5117.t1
Unique NameGgra5117.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1084
Homology
BLAST of Ggra5117.t1 vs. uniprot
Match: A0A2V3J6W4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W4_9FLOR)

HSP 1 Score: 1030 bits (2662), Expect = 0.000e+0
Identity = 557/1076 (51.77%), Postives = 734/1076 (68.22%), Query Frame = 0
Query:    1 MMLVLRTLTETLFKTPLLHTDLLPLCTALASSWDFPTHGARAVLISSCIDIICRNEPPPPAIPLLSSLLPPSTPTSRQTLPQIPISSADALCSAVLHNASRDYRAASHVIQHVLPHVSPKVLLCIPSLLEAMLPPRPCDDSRQLFLQTAIHLYSSGVSFETRHQRILNDILCASFISSEPLIREHASKLFHICFKKSTLSNAFEYLIEGLREAHLPPLRSKRNALIKPSLAALSLLASTVEPVHWCYAFRSVLSISEYAEGAVHHLCQVIKAAVTTAPTSVFAAAMIPELVALIMRLISDENLPHGAECLQILLKRYKTSVKELELILGVLECIVEKNIRISFPIIQAAIPQFKRLVD-KGPKDELQLLGRRLLIIIFDRCATQLEDFQCSEHDIEHIITTFSHGLDEAFVHTGACSEEDRLGIQRWCWRFYPPRQVMNTRSDSLPLYLWRICT--GVERPFKTGELTKMCSEENILEEISGDETKSFSSPVFILLDKAIQLHSVDDICPPEALLEALLRRLRLLRREDN------RVVAHELRLLRLISLICFQHGLCFPAEDIEEQTIHSVLQASELSLDVEADRLLLRSIIVNSKRGSIDVSVWDTIMSRYRNPINKNDDLDDIISTVVVDERGI---KSILYALSHSTIPEVIVESVLDTFERTKGYDVLFQAITENGGLSSVCNVLQALPHQGMRSASEPSSGHDIGYKRSKSFILLISSAGSIPDSAESGDLLRVVCDTFMRESTSQLTSKSRVDLLSHVVRCIIVLLRGLQDSGKIAFIRHSGVEAQGIKLLTSIGTTTRASGILISSIACLLNLFMHKTDLAVYVMPELPINIEFLTQPATWEKLLTPVLGLGDVDETNRMANCWHLLNSLLLGGKGDMAKFQAILTPGIVVLLSIAAASWSRLLSEAAQHTFRTVLQYKYHEQSVLRYIGVFKELCSFVVSNFCVSQAEEFFSSEILLLAELIRNSFVDKHMCKLLEHISEWCH----NHEDAGRDISRQPMFHEISTLFRAIKERLQLSAEGEKEICTMKLSKSLADVSKIFNRTPASILKYVPDVLLGRYTMVWR 1060
            MM VLRTL++TLF +  L  +L+PLC  LASSWD  THGARAVLI+SCID ICR   P  AI LLS+LLPPS P+++     IP SSA+AL  AVL   S  Y +A+ +++  LP +S K L   P+LLEA+LPP+PCD SR L+LQ AIHLYS+ V  E +  R LN +LC SFISS+P++RE A+KL  IC  K TLSN FEY+IEGLREA +PP RSKR+ L+K +L ALSLLAS+V+  HWCYA R+V S+ EYAEGA  HLCQVI+AAV  AP SVFA+ +I +LVA  MRL+S E LP  AECL+ +L RYKT+V+EL+ ILGV+EC+VEK + I + +I++ I QF+RL D K   + LQ +GRRL++IIFD+CA+Q E    +  +IE ++  F+ GLD  F+HT +CS EDRLGIQ WCWRF+PPR +M   S  +PLYLWRI    G E      +L  +CSEE++L +I+GD  +   SPVF+++DKA+Q+H VD +C PEA++EALLRRL  +    N      + +   LR++RL+   C  +GLCFP +DI+E  +  +LQ+ E S DVEADR+LLRSII + K G +DV  WD + S+YRNPINKN  LD +I+ ++         +S++YA+S+ST    IVE +LD FER +G   LF A+ +NG +     VLQALP QG+ S  E +   ++GY  + SF+ LI  +  IP   ES  LLR+VCD+F RES S LT K +V LL  +VRC+I LLRGL D  KIAFIRHSGVE+Q +KLLT +  T R+SG+L+S+IACL+NLFMHK DL ++ MPEL IN+++L    TWEKLLTP  G  DVDETN MAN  +L  SLL GGKG M  F+ +++  I++LL  AA SWSRLLS+AAQ TFR +LQ K HEQ       +F ELCSF VS FC    +   S+ IL L EL+ N FVD  + K+L++I+EWC     ++++ GR+      F E+  L RA+ +RL    EGEK++    +S+SL+D    F+  P    +  PDVL+GRYTM+WR
Sbjct:    1 MMHVLRTLSDTLFHSEHLQHELIPLCAQLASSWDLSTHGARAVLITSCIDSICRPNAPSAAILLLSALLPPSPPSNKDVSTYIPQSSAEALSVAVLRQVSTKYESAAQILKFSLPLLSSKALKSFPTLLEALLPPQPCDKSRLLYLQIAIHLYSNDVKLE-QTPRSLNLVLCTSFISSDPIVREQATKLLKICHNKVTLSNTFEYIIEGLREASMPPFRSKRSDLVKQTLPALSLLASSVQAPHWCYALRTVFSVVEYAEGATEHLCQVIQAAVKVAPASVFASGLISDLVAFTMRLMSTEYLPIAAECLRTVLMRYKTTVEELQAILGVVECLVEKQVAIVYALIRSTIVQFRRLADNKTAPEHLQTIGRRLILIIFDKCASQHEGKSAAPENIEDVLEIFTDGLDPLFLHTLSCSVEDRLGIQNWCWRFFPPRVIMKCVSGVIPLYLWRISAEPGAEL---ADDLESLCSEESLLSQIAGDGCEPGFSPVFVIVDKAVQIHRVDGLCLPEAIIEALLRRLHSMDASCNPGSQCEKHINDVLRIVRLMLTTCSGYGLCFPIDDIQEDNLRIILQSQEFSFDVEADRILLRSIIGHCKHGDLDVHAWDLVASKYRNPINKNVQLDLVITGLITARDTADPCESLIYAISNSTRCHEIVECLLDVFERQEGRKALFNAMRDNGAIGITFKVLQALPSQGLLSMQEGTCKPNLGYDLAISFLDLICCSEVIPCYDESWTLLRIVCDSFTRESMSHLTFKPKVHLLLALVRCLIALLRGLDDHTKIAFIRHSGVESQAVKLLTDLPNTMRSSGLLLSAIACLVNLFMHKNDLTIHFMPELEINMKYLANKHTWEKLLTPAPGAADVDETNSMANSCYLFESLLRGGKGCMDAFRDVISRKILILLHAAAVSWSRLLSQAAQSTFRALLQLKVHEQHSFFKTQLFGELCSFCVSQFCTPHNQFLTSAHILFLNELVHNGFVDGQLPKILKYIAEWCRKNGTSNDEPGREAPTHAPFVEMRALSRAMNDRLCYLPEGEKKLALSGISRSLSDFDLTFSAIPHVGRETSPDVLMGRYTMIWR 1072          
The following BLAST results are available for this feature:
BLAST of Ggra5117.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6W40.000e+051.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 52..1037

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:505692..508943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5117.t1Ggra5117.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 505692..508943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5117.t1 ID=Ggra5117.t1|Name=Ggra5117.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1084bp
MMLVLRTLTETLFKTPLLHTDLLPLCTALASSWDFPTHGARAVLISSCID
IICRNEPPPPAIPLLSSLLPPSTPTSRQTLPQIPISSADALCSAVLHNAS
RDYRAASHVIQHVLPHVSPKVLLCIPSLLEAMLPPRPCDDSRQLFLQTAI
HLYSSGVSFETRHQRILNDILCASFISSEPLIREHASKLFHICFKKSTLS
NAFEYLIEGLREAHLPPLRSKRNALIKPSLAALSLLASTVEPVHWCYAFR
SVLSISEYAEGAVHHLCQVIKAAVTTAPTSVFAAAMIPELVALIMRLISD
ENLPHGAECLQILLKRYKTSVKELELILGVLECIVEKNIRISFPIIQAAI
PQFKRLVDKGPKDELQLLGRRLLIIIFDRCATQLEDFQCSEHDIEHIITT
FSHGLDEAFVHTGACSEEDRLGIQRWCWRFYPPRQVMNTRSDSLPLYLWR
ICTGVERPFKTGELTKMCSEENILEEISGDETKSFSSPVFILLDKAIQLH
SVDDICPPEALLEALLRRLRLLRREDNRVVAHELRLLRLISLICFQHGLC
FPAEDIEEQTIHSVLQASELSLDVEADRLLLRSIIVNSKRGSIDVSVWDT
IMSRYRNPINKNDDLDDIISTVVVDERGIKSILYALSHSTIPEVIVESVL
DTFERTKGYDVLFQAITENGGLSSVCNVLQALPHQGMRSASEPSSGHDIG
YKRSKSFILLISSAGSIPDSAESGDLLRVVCDTFMRESTSQLTSKSRVDL
LSHVVRCIIVLLRGLQDSGKIAFIRHSGVEAQGIKLLTSIGTTTRASGIL
ISSIACLLNLFMHKTDLAVYVMPELPINIEFLTQPATWEKLLTPVLGLGD
VDETNRMANCWHLLNSLLLGGKGDMAKFQAILTPGIVVLLSIAAASWSRL
LSEAAQHTFRTVLQYKYHEQSVLRYIGVFKELCSFVVSNFCVSQAEEFFS
SEILLLAELIRNSFVDKHMCKLLEHISEWCHNHEDAGRDISRQPMFHEIS
TLFRAIKERLQLSAEGEKEICTMKLSKSLADVSKIFNRTPASILKYVPDV
LLGRYTMVWRPTGLVGSVTTSTSPQQDRLNERT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold