Ggra5107.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5107.t1
Unique NameGgra5107.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length376
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5107.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 297..316
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 372..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 347..351
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..371
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..327
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 292..296
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..346
NoneNo IPR availableTMHMMTMhelixcoord: 273..295
NoneNo IPR availableTMHMMTMhelixcoord: 334..356
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 111..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:483236..484363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5107.t1Ggra5107.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 483236..484363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5107.t1 ID=Ggra5107.t1|Name=Ggra5107.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=376bp
MQRTSSPLYSQSRTQAFVVVGFDLRPRLHPSLRPSIYVFRKKQCSGAAVF
RSRHVSVQIPILSQAQQISPQPRSEDVAEQPKPLPYRPSRKDSPSTKPLI
NRLLASRRLSLTFIVLTALLYVTSACLIASTIADASLQGHQRILLFGLGI
LLPDFRHTLIYYFHAVQDLYEYKPAFRAFVFSSKTRPSTTESESSEEPPE
ESLPRPELLWLKKASQDFHDQIRSGFEEGAKQIDKLVGVPGRELASGLTR
PIRETGTHFQQLTTGTDLTLRKNVLIATASILLSIVGYFMSSVVDPSVGG
VSVMLASLLSNAVLSSRRHEMLALLNDGRVVISLVGTLSCAILGLAPTPA
AYCFLLCCMALVTTRFTVDWLKVLK*
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