Ggra5106.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5106.t1
Unique NameGgra5106.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length565
Homology
BLAST of Ggra5106.t1 vs. uniprot
Match: A0A2V3J6Y6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Y6_9FLOR)

HSP 1 Score: 208 bits (529), Expect = 4.680e-56
Identity = 218/576 (37.85%), Postives = 290/576 (50.35%), Query Frame = 0
Query:    1 MGNSVSCFERVSEHPPYSWPKDHPDRERAIAER---KRARHNMKLAEKQARGRTGTQQVQPEPAAAPQ----------PKADSKEVVEAAP-VPQKPVEEPKV----AEVPEE-----------------------------------------ETTEEVVKTGETAD----AAEGVVEEK--VDEVKEDVMPDKPAEEVAXXELDLIAXEVTAEXXXXXXXXESEAAAVAIVSETLEEAEPTDEKKDDAXXXXXXXXXXXSVEAVDNVEKEERXXXXXXXXXXXXDDDVIIPVNIEDEEPKDDAPEVEPEPVQGEPEKELELAPVEEFVKEEXXXXXXXXXXXQE-PTTEADTTSTTP-IGPDGVVKEVKPDLSDEELPSIESRRAMFDTTEDELPKAADMNRDVYDAASNEYITLEEYRRRQRERAQGLVKERLEKYEEIDEEVSKEKAELAAIVAARSVAQQTADWAYKQQPDKVSTPTKDPEGVIKEIMSPEVPLSPS--AGSVAGISAKFEADVSDMPPTFPLLGETKVVSDGGDVDAINASVEPEEVTETVEDIIAAKSDVAVEVTDRTE 507
            MGNS+SCF+RVSEHPPYSWP+DHPDR+RAIAER   +RAR N ++A+K  R     +Q   EPA   Q          PK  +   +E  P VP  P+E P+     AE+ +E                                         ET  E    G  A+    AA+ +  EK  VDEV +D+  ++P+ E+                       E + A +A+     EE++ ++EK ++A            V  VD++E+E                      +I+ + P  +  + + +   G+ +KE +           XXXXXXXXXXX   PT E   T   P  GP  V KE   DL + E+ SI+SRRAMFD +ED+LPK AD+ RDV D  +NEYITLEEYRRRQ +RAQGLVKERLEK+EEID+E+SKEKAELAAIVAARS AQ+ ADW YKQQ + + +P    E V KE+ S    L  S  AGSVAG+SAKF  D           G TK V++  D +A++  V+  +  E  E  +   + V  EV D  E
Sbjct:    1 MGNSLSCFDRVSEHPPYSWPRDHPDRDRAIAERSERRRARRNNRIAQKAVRSGAKPEQDNAEPAQPVQQPQQQPAESAPKEQTAPDLEKQPTVPAAPIESPEKDAIEAELKDEQQVETVAXXXXXXXXXXXXXXXXXXXXXXAQEEAKQLSEPAETKPEAAVAGTAAETPETAAQPITAEKELVDEVAKDITQEEPSTELEKP-------------------VEQQVAHIAV-----EESKASEEKVEEAAQEAGSAVTPELVTTVDSLEQEPAQEEAV--------------TSIDADTPVQEPSDTKQDEQDGQEDKEPQAXXXXXXXXXXXXXXXXXXXXXXXXPTHEELATLDAPEAGP--VTKE---DLEEHEMLSIDSRRAMFDRSEDQLPKPADLRRDVLDPVTNEYITLEEYRRRQSDRAQGLVKERLEKFEEIDDEISKEKAELAAIVAARSDAQKKADWRYKQQ-EGMKSPKMKSEAV-KEVESKVEMLDRSVMAGSVAGMSAKFNDD-----------GATKEVAEV-DGEALSPVVKKMDFVEESETHVVDSTGVTEEVVDAVE 519          
BLAST of Ggra5106.t1 vs. uniprot
Match: R7QQH0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH0_CHOCR)

HSP 1 Score: 90.1 bits (222), Expect = 4.630e-15
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 0
Query:  306 DLSDEELPS-IESRRAMFDT-TEDELPKAADMNRDVYDAASNEYITLEEYRRRQRERAQGLVKERLEKYEEIDEEVSKEKAELAAIVAARSVAQQTADWAYKQQPDKVSTPTKDPEGVIKEIMSPEVPLSPSAGSVAGISAKFEADVSDM--PPTFPLLGET 463
            +L+ E  PS I++RRA+F+   +DELP+  ++ RDV D  + + ITL EYR RQ +RA+G+VKE++E +E +D+ V+KEKAE+AAI A R+     A+W +K  P                          ++G  + ++AK  A+  D   PP   LLG+T
Sbjct:  902 ELAAEAAPSTIDTRRALFERGADDELPEPQELQRDVLDPVTGDLITLAEYRGRQADRARGVVKEKIENFEAVDDRVAKEKAEIAAIEAVRTQVAGKAEWKFKSDP--------------------------ASGHASPVAAKLAANPDDASPPPIHALLGDT 1037          
The following BLAST results are available for this feature:
BLAST of Ggra5106.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6Y64.680e-5637.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQH04.630e-1537.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 365..385
NoneNo IPR availableCOILSCoilCoilcoord: 26..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:481229..482923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5106.t1Ggra5106.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 481229..482923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5106.t1 ID=Ggra5106.t1|Name=Ggra5106.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=565bp
MGNSVSCFERVSEHPPYSWPKDHPDRERAIAERKRARHNMKLAEKQARGR
TGTQQVQPEPAAAPQPKADSKEVVEAAPVPQKPVEEPKVAEVPEEETTEE
VVKTGETADAAEGVVEEKVDEVKEDVMPDKPAEEVAEKELDLIADEVTAE
PKAEAVEKESEAAAVAIVSETLEEAEPTDEKKDDAEVDAAVVDEVVSVEA
VDNVEKEEREIVDDIVEVKEVDDDVIIPVNIEDEEPKDDAPEVEPEPVQG
EPEKELELAPVEEFVKEEPELELAADEEFQEPTTEADTTSTTPIGPDGVV
KEVKPDLSDEELPSIESRRAMFDTTEDELPKAADMNRDVYDAASNEYITL
EEYRRRQRERAQGLVKERLEKYEEIDEEVSKEKAELAAIVAARSVAQQTA
DWAYKQQPDKVSTPTKDPEGVIKEIMSPEVPLSPSAGSVAGISAKFEADV
SDMPPTFPLLGETKVVSDGGDVDAINASVEPEEVTETVEDIIAAKSDVAV
EVTDRTEIMEGATTETVGVAEKVNKVPETVTDAIPASMEDVAKKSAEVAE
TEGNTIQVPPEAES*
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