Ggra5102.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5102.t1
Unique NameGgra5102.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length961
Homology
BLAST of Ggra5102.t1 vs. uniprot
Match: A0A2V3J6U8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U8_9FLOR)

HSP 1 Score: 1216 bits (3145), Expect = 0.000e+0
Identity = 622/957 (64.99%), Postives = 742/957 (77.53%), Query Frame = 0
Query:    1 MQRNGDPIVPITIENILNALSILHQGDQRVSEADRFLAQARASPQVWHVLPALLNSPSQPQLLFAAQALYTRIHADWLILDNNARSAAVSLATEALLSPSLAQQNQATRSSAVYYFGKALGDAVSRSPPAFQEPLWEMLVLKLQNNPALKCDAMAAIAAEMDQNATSHVANHVQTRAFCRSKAHQVVPDAVFLLGSCRRNRTLSEEQVQQLKAAIQCLQAWTPYANKLQIADALLHVIVMPQLAQSATEALNEIVGYSGTSLSLLLSTTKGLTAAFHGASGVDAHIIHHAISEVVCSLSEWNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAADHLMQEDQARLGTERICAVLSVVIQRMESLSFIRDHFNPELDNGESEEEKGPILELLATGALSIGHQKYLGLVFKFLSVDDKTPPSQVCAALEALGASKDSAEDAKIDESEWNNSQQVLDRVLRFADVSPESSVLSTSGGSLHWQTVLQKSALGALASHGLLLRRDEKLFYRTAVCAVSALQSRDLADRGATLLQSLSEIQAESLLPFWRDLITALNRSVSSLSTGAAERATNAVASVTSLLRLRQERVSALEEMVRKPCERLCVAAAGRVDAPVNEADLCRDLALLSTAMRVYNDHEAVAFVFQRIKEPVFHLARRHCGNGVVSKAICNLLEINAMPTLFDDEDEANGDRGFDRDEKSRLQLMVGITKLLGECFKDSGPDGEDVWLKTMNRLIPDLVTGVEDAIGSFDGEAVDCVTECVRCGVFGLSTFSGGSYDTQPDMTQMFFKLLTNLTSRASSTLLPVAAEISRTAMKTLHCSNVGNVKASLSFWKALFTRAAGAPLQQTILSFAGGPNGVSAGALCAARNSRCASGVADVLFAMCRIISGELDENTLLRDCLKAAFGVDSVPKAGLDRSVREMLFRGCYASVGNKREFRQSLHEFGRVCNM 957
            MQ + + + PIT ENI  AL +L  GD R+  AD +LAQARASPQVW VLPALL S SQ  LLF AQALYTRI +DWL LD+N RS+AVSLA EALLS SLAQQ QA  SS V+Y GKALG AVS SP  FQEPLWEMLVLKLQ   ALKCD MAAIA E+D NATSHVANHVQ RAFCRS+AHQVVPDA++LL S R N T+SEE ++QL+ A+QCLQ+WTPYA+K Q+ADALL VI +PQLA S TEALNEIVGYSGTSL LLL T +GLTAAFH A G D HI+HHAISEVVCSLSEWNADELMEQQT+QSR VI  VI+LLW CLN PDK+SFFAAIEGWMAW+AADHLMQ DQ RLG +R+ AVLSVVIQRMESLSF+R  F PELD  + ++EKGP+++LL  G+LSIGH KY+ L  KFLS     PP Q+CA LEAL AS            +W   ++VL+ V+R  +     S+ +  G    WQTVL+ S L ALAS+ LLL +D+KLFYR+AVCAV ALQ  +LA +GA LL++L E+    L+ F +DLI  LN SV+ +S  AAE AT AVAS+   L  R ERVSALEE+VRK CERLCVAA G+ D  +NEA LCRDL LLSTA+RVYND EA   VFQRI++ VF L RRHC NGV+SKAIC LLE+NA PTL D++DE + +     DEK RL   V + KL+ ECFK SGPDGE+ WLKTMN+L+PDLVTG+ED +G FDG+A+DCV ECV+C V GL  FS  ++DTQP+MT++ FKL+T LT+RAS T+LP+A+EIS TAM+ +  S VG+VKA LSFWKALF+R AGA LQQT+L+  GGPN ++AGALCAAR +RCAS  ADVLFAMCRII+G+LDE  +LR+CL++AFG+++VPK GL+RSVREMLFRGCY+SVGNK+EFR++L + GRVC M
Sbjct:    1 MQHDVEQL-PITTENIHKALLVLQHGDHRLLHADHYLAQARASPQVWQVLPALLASTSQTSLLFGAQALYTRIRSDWLALDDNIRSSAVSLAVEALLSHSLAQQTQANCSSVVHYLGKALGCAVSMSPQQFQEPLWEMLVLKLQGRRALKCDVMAAIATELDHNATSHVANHVQIRAFCRSRAHQVVPDAIYLLNSVRNNETVSEECIKQLRVAVQCLQSWTPYADKAQVADALLKVIGIPQLAGSVTEALNEIVGYSGTSLPLLLCTARGLTAAFHAARGPDMHIVHHAISEVVCSLSEWNADELMEQQTDQSRVVIHTVIELLWICLNVPDKASFFAAIEGWMAWVAADHLMQADQPRLGVDRVSAVLSVVIQRMESLSFVRACFEPELDEEDGDDEKGPVVDLLCVGSLSIGHYKYILLTSKFLSEASSRPPGQICATLEALAASTXXXXXXXXXXHDWKGVREVLETVIRLVESGAAGSIQNGDGHP--WQTVLRSSGLKALASYTLLLVKDDKLFYRSAVCAVRALQQPELARQGACLLRNLGEVGPNFLVQFLQDLIMVLNHSVTKMSVSAAEEATYAVASIACKLETRGERVSALEELVRKACERLCVAARGKDDLVLNEASLCRDLILLSTAVRVYNDQEAAVCVFQRIRDAVFQLCRRHCANGVISKAICTLLEVNASPTLLDEDDEVSDECVSAHDEKCRLAFTVSVLKLVAECFKRSGPDGENAWLKTMNKLVPDLVTGMEDNMGVFDGDALDCVRECVQCAVVGLKNFSSENFDTQPEMTRLVFKLVTTLTTRASGTVLPLASEISHTAMRIIQSSEVGSVKAGLSFWKALFSRRAGAMLQQTVLNVTGGPNAIAAGALCAARYTRCASDAADVLFAMCRIIAGQLDEKQMLRECLRSAFGMENVPKEGLERSVREMLFRGCYSSVGNKKEFRKALDKVGRVCGM 954          
BLAST of Ggra5102.t1 vs. uniprot
Match: R7QDU7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDU7_CHOCR)

HSP 1 Score: 489 bits (1260), Expect = 5.810e-155
Identity = 315/923 (34.13%), Postives = 492/923 (53.30%), Query Frame = 0
Query:   63 LFAAQALYTRIHADWLILDNNARS-AAVSLATEALLSPSLAQQNQATRSSAVYYFGKALGDAVSRS-PPAFQEPLWEMLVLKLQNNPALKCDAMAAIAAEMDQNATSHVANHVQTRAFCRSKAHQVVPDAVFLLGSCRRNRTLSEEQ---VQQLKAAIQCLQAWTPYANKLQIADALLHVIVMPQLAQSATEALNEIVGYSGTSLSLLLSTTKGLTAAFHGASGVDAH-IIHHAISEVVCSLSEWNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAADHLMQEDQARLGTERICAVLSVVIQRMESLSFIRDHFNPELDNG--ESEEEKGPILELLATGALSIGHQKYLGLVFKFLSVDDKTPPSQVCAALEALGASKDSAEDAKIDESEWNNSQQ---VLDRVLRFADVSPESSVLSTSGGSLHWQTVLQKSALGALASHGLLL--RRDEKLFYRTAVCAVSALQSRDLADRGATLLQSLSEIQAESLLPFWRDLITALNRSVSSLSTGAAERATNAVASVTSLLRLRQERVSALEEMVRKPCERLCVAAAGRVDAPVNEADLCRDLALLSTAMRVYNDHEAVAFVFQRIKEPVFHLARRHCGNGVVSKAICNLLEINAMPTLFDDEDEANGDRGFDRDEKS---------RLQLMVGITKLLGECFKDSGPDGEDVWLKTMNRLIPDLVTGVEDAIGS-FDGEAVDCVTECVRCGVFGLSTFSGGSYDTQPDMTQMFFKLLTNLTSRASST--LLPVAAEISRTAMKTLHCSNVGNVKASLSFWKALFTRAAGAPLQQTILSFAGGPNGVSAGALCAARNSRCASGVADVLFAMCRII---SGELDENTLLRDCLKAAFGVDSVPKAGLDRSVREMLFRGCYASVGNKREFRQSLHEFGRVCNM 957
            +FAA  ++ R  ADWL   N A    A  L  E L          A  +S V++FGK  G  +S +  P  ++ +W  L+ +L ++  LKC+A+AA   E+D  + SHV  +   RAFC+SKAH+V+   V +L S      LS  +   +  L+AA+ CL AW  YA++  IA  LL  I +PQLA  A+E L E+VGYSG+++ LL+ T  GL + F    G      +HHAI+EVV SLS+ NADEL+EQ    S  ++     LL  CL   D +SFFA+++GW +WI A +L++++QARL  ER+  V+ +V+QR+ SL F+ D        G  E+ +E   + +LL      IG   Y+ ++  F   D       +CAAL ++  +       +IDES  +  +    VL  + R  D+    S  S   G+ +    +   AL A+ S   LL  +  E  F R   CA + +    + ++ +  L  L++   E L  F  DL+++  R++S +S  AA      +A VTS L  R ER  AL  ++ +PC+ L ++     +    E  +CR L L++  ++  ND+E    V+ R++  +F +A   CGN  VS+AIC +LE+  +PTL DDE         + D +          R  L +    L  ECF+ SG DGE VWL  +  + P +V  ++   G+  +G A+ C+   +   + GL +F+ G+YD++ DM   +F+  T L S  SS   ++  ++  +   +K L C+ +  V+ +L +WK++F    G  + + IL+ AGG + ++   +CAAR++RCA  VAD LFA+C+ +   SG +D + +LR CL AAF  + V   GLD  VRE L+R C ++ G+ R+FRQ+L EFGRV ++
Sbjct:    1 MFAANTIHARTRADWLTFANEAHFLTAFHLVLEGLERAKHISSAGAAATSPVHFFGKTSGFCLSMAHTPNLRDVMWASLISQLGSDHVLKCNALAAAVQEIDHTSDSHVETYAVMRAFCQSKAHEVLTSPVAVLASLDA-APLSPHKPMSIPDLRAAVLCLHAWQRYADRNAIASVLLKAIRVPQLADDASETLAEMVGYSGSNMQLLMGTCDGLLSTFQHVRGCSGQSTVHHAIAEVVSSLSDGNADELLEQVNTNSVLIVEKATQLLTLCLELRDDASFFASVQGWTSWITAANLVEQNQARLVLERVAHVVRLVVQRITSLQFMAD-LTESHGRGCPETNDELVCVRDLLLESTKCIGIGGYVEVIKPFFETDWNVSTRSLCAALFSVAVA------GEIDESVGSQKEDRHVVLGLLGRILDLIETISANSREAGNGYASVKI--FALSAMCSFAELLSDQGSEAEFRRALHCAGTGILDPQVNEKSSEFLYELADAHPERLRMFLTDLLSSGTRALSQMSDKAALNCVRGLAKVTSALETRGERQKALNIILEEPCKYL-LSTRNEQETSTVEQKVCRSLGLVAAGLQEVNDNEIAMNVYSRLRGTIFEIAISRCGNETVSRAICRVLEVCVLPTLLDDEQPRPAALAHNEDTRGIPASSVGCGRAVLAMSCMSLAAECFRRSGEDGETVWLSAVAEIAPHVVEFLDGGCGTEAEGRALACLRMSLEHSLEGLQSFTNGNYDSRKDMAVEYFRFATRLLSAESSVAVIIQKSSGSADAGLKGLQCNEIIVVREALLWWKSVFGPGQG-EVARAILAGAGGADNIARAFVCAARHTRCAGAVADALFALCKWVAQVSGNIDPDNVLRTCLTAAFAAEGVASLGLDVKVRETLYRSCISATGSMRDFRQALREFGRVYSL 911          
The following BLAST results are available for this feature:
BLAST of Ggra5102.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6U80.000e+064.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDU75.810e-15534.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..959
e-value: 1.9E-51
score: 177.3
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 13..956
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 12..848

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:471239..474121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5102.t1Ggra5102.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 471239..474121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5102.t1 ID=Ggra5102.t1|Name=Ggra5102.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=961bp
MQRNGDPIVPITIENILNALSILHQGDQRVSEADRFLAQARASPQVWHVL
PALLNSPSQPQLLFAAQALYTRIHADWLILDNNARSAAVSLATEALLSPS
LAQQNQATRSSAVYYFGKALGDAVSRSPPAFQEPLWEMLVLKLQNNPALK
CDAMAAIAAEMDQNATSHVANHVQTRAFCRSKAHQVVPDAVFLLGSCRRN
RTLSEEQVQQLKAAIQCLQAWTPYANKLQIADALLHVIVMPQLAQSATEA
LNEIVGYSGTSLSLLLSTTKGLTAAFHGASGVDAHIIHHAISEVVCSLSE
WNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAA
DHLMQEDQARLGTERICAVLSVVIQRMESLSFIRDHFNPELDNGESEEEK
GPILELLATGALSIGHQKYLGLVFKFLSVDDKTPPSQVCAALEALGASKD
SAEDAKIDESEWNNSQQVLDRVLRFADVSPESSVLSTSGGSLHWQTVLQK
SALGALASHGLLLRRDEKLFYRTAVCAVSALQSRDLADRGATLLQSLSEI
QAESLLPFWRDLITALNRSVSSLSTGAAERATNAVASVTSLLRLRQERVS
ALEEMVRKPCERLCVAAAGRVDAPVNEADLCRDLALLSTAMRVYNDHEAV
AFVFQRIKEPVFHLARRHCGNGVVSKAICNLLEINAMPTLFDDEDEANGD
RGFDRDEKSRLQLMVGITKLLGECFKDSGPDGEDVWLKTMNRLIPDLVTG
VEDAIGSFDGEAVDCVTECVRCGVFGLSTFSGGSYDTQPDMTQMFFKLLT
NLTSRASSTLLPVAAEISRTAMKTLHCSNVGNVKASLSFWKALFTRAAGA
PLQQTILSFAGGPNGVSAGALCAARNSRCASGVADVLFAMCRIISGELDE
NTLLRDCLKAAFGVDSVPKAGLDRSVREMLFRGCYASVGNKREFRQSLHE
FGRVCNMVTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold