Ggra5090.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5090.t1
Unique NameGgra5090.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Homology
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A2V3J793 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J793_9FLOR)

HSP 1 Score: 319 bits (817), Expect = 1.440e-105
Identity = 147/251 (58.57%), Postives = 191/251 (76.10%), Query Frame = 0
Query:   45 EGIISYPSAAFTTEQTKIIAPIITETMPDPLHNLSRFQRSMVEKQKHVDYNSIWMGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYYDIIDSVGGKTRQGLAVLRRKSKYSTLEGNHAAVQKILDNKYP 295
            +G+I++  A   ++++     + +  + D LH L + ++ ++ K  +V Y SIWMG  EVN+VLR+M+N+ TY+EWGSGGST+NFPQFAKRAYSIEHD+TWC++M   IS RPELKHL+Y+CVP+ RGT GWG  S FEEG YK FK Y+D I+ L    FD+VLIDGRARVD A+KALSYIG +SVV+VHDAERIWT R YA++  YYDI+DS+GG  RQG+A++RRK K+  LEGNH AVQK+ D  YP
Sbjct:   57 QGVIAHVEARDLSDESPNEVGV-SSLIADSLHKLEKKEQELLLKTLNVSYQSIWMGVVEVNMVLRHMNNIDTYLEWGSGGSTHNFPQFAKRAYSIEHDETWCTKMIDQISKRPELKHLQYNCVPIARGTKGWGVSSPFEEGDYKVFKKYVDQIDNLRVPIFDMVLIDGRARVDCAVKALSYIGDHSVVVVHDAERIWTHRKYARVLHYYDIVDSIGGSERQGIAIMRRKKKFQNLEGNHEAVQKMFDQIYP 306          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A1X6P5L4 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5L4_PORUM)

HSP 1 Score: 160 bits (404), Expect = 5.830e-44
Identity = 80/182 (43.96%), Postives = 110/182 (60.44%), Query Frame = 0
Query:   93 DYNSIWMGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYYDIIDSVGGKTRQGLAVLRRKS 274
            D   +W+   E + +L  M     Y+E+GSGGST  F   A+RAYS+EH++ WC +M + ++++     + Y C  V  GT GWG  +AFEEG YK FK Y+D + +LGE  FDVVLIDGRARV  A+K L Y+   S +I+HDA R      YA +  YYD I  V G+  +G  + RRK+
Sbjct:   75 DLAGLWISSDEASRMLWAMKPGMIYLEYGSGGSTMAFAPMARRAYSVEHNEPWCKKMQQKLAAKGLTNRISYKCESVPAGTGGWGIANAFEEGDYKVFKRYVDTVTRLGEATFDVVLIDGRARVACALKVLPYLSSTSTIILHDARRA----HYAAILDYYDEIGQVVGQ--RGARLFRRKA 250          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A1X6P395 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P395_PORUM)

HSP 1 Score: 150 bits (379), Expect = 5.220e-39
Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 0
Query:   96 SIWMGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYYDIIDSVGGKTRQGLAVLRRK 273
            ++WM   E   +L  M     Y+E+GSGGST  F   A RAYS+EH++ WC RM + ++++     + Y C PV RGT GWG    FEEG+Y+ F+PY+D +    E  +D+VL+DGRARV  A+K L Y+  +S++++HDA R    RS   +  YY+ +  V G    G+ + RRK
Sbjct:  154 ALWMTPEEATSMLGVMRKDMVYLEYGSGGSTMAFAPLAARAYSVEHNEEWCGRMRQLLAAKGLTHRVTYACTPVARGTGGWGIGHEFEEGTYRVFQPYVDAVTAFNESVYDIVLLDGRARVACALKVLPYLNDDSLLLLHDARRDKYVRS--AIGRYYEPLGEVVGAN--GVRIFRRK 327          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A1X6P1R9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1R9_PORUM)

HSP 1 Score: 116 bits (291), Expect = 9.960e-28
Identity = 68/182 (37.36%), Postives = 96/182 (52.75%), Query Frame = 0
Query:   99 MGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKR---GTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYY-DIIDSVGGKTRQGLAVLRRKSKY 276
            M   E  L+   M     Y+E+GSGGST  F + A  AYS+EHD  WC RM   + + P   H+   C PV R   G+ GWG ++ F+   +  F+ Y+   + L    FDVVLIDGRAR+  A+  L  +   SVVI+HD  R    + Y  ++ YY ++    GGK   G  +LR + K+
Sbjct:    1 MTPAEARLIRSAMFPSMRYLEYGSGGSTIPFGRLASVAYSVEHDAEWCERMKPTLIATP---HISMVCSPVARAPAGSGGWGSRTPFDAADFATFRAYVHAPDALPPAAFDVVLIDGRARLACALYVLRKLTPTSVVIIHDGNR----KRYQHVAKYYTEVGRETGGK---GAVLLRPRKKF 172          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A819YN23 (Hypothetical protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A819YN23_9BILA)

HSP 1 Score: 108 bits (271), Expect = 1.910e-25
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = 0
Query:   99 MGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHL--RYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYYDI 255
            M   E N++  Y++   T +E+GSG ST +F QF    YSIEH++ W   +   I   P +  +  +Y  +P+  G  GW     F EG+   F  YI  +  L  +KFD VLIDGRARVD A +   Y+ +NS++ VHD         Y K S Y++I
Sbjct:    1 MSAEERNIIRLYLNKSHTMLEYGSGYSTLHFSQFVNAYYSIEHNEQWYKTIKSLIDHSPIISSIIKKYILIPINPGYKGW--LGGFSEGNKIQFHDYIQAVHSLNVRKFDRVLIDGRARVDCAFEIYPYLDRNSIIFVHD---------YTKRSHYFNI 148          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A7S1WZJ5 (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1WZJ5_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 4.490e-21
Identity = 59/182 (32.42%), Postives = 94/182 (51.65%), Query Frame = 0
Query:   99 MGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEK-KFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERI---WTWRSYAKMSTYYDIIDSVGGKTRQGLAVLRRKSKY 276
            M   E+  ++  ++  TT++EWGSGGST  +  F  R +SIEHD+ W + + + +   P+L    Y    V+    GW  +     GSY  F+ Y+  ++      K+DVVL+DGRARV  A  AL ++   S ++VHD  +    +  R Y ++  +YD +  V       L VLR K ++
Sbjct:   45 MTSKEMEYIVSLLNERTTFLEWGSGGSTRCYVNFVGRYFSIEHDKAWHATIEQEVGGNPKLS---YQLANVESAPGGW--RGTSWPGSYDQFRSYVHAVDNFKPGGKYDVVLVDGRARVACAAYALRHLHPESTLLVHDFYQPRYRYLSRKYGQLFRFYDQVHRV-----DSLVVLRPKPEF 216          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A1G2ITZ9 (Uncharacterized protein n=1 Tax=Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_37_44 TaxID=1802223 RepID=A0A1G2ITZ9_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 9.190e-19
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = 0
Query:  103 EVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSR-------PELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGE--KKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMSTYYDIIDSVGGKT--RQGLAVLRRKSKY 276
            E + +  Y++  +  +EWGSG ST  F ++AK  +SIEHD  W  R+   I          P+ + L++   P KRG N              +F+ YI     LG   K+FD+V IDGRAR++  ++AL Y+   +VV +HD +R   W +      +Y I+D +G      +  ++ R K +Y
Sbjct:   22 ESDFLKSYLNKNSVALEWGSGWSTVEFAKYAKEYHSIEHDFCWYRRVKNKIGKNTRIYYAPPDTEDLKWF-PPEKRGDNA-------------SFRNYIKFAGVLGSLGKRFDIVFIDGRARLECFLEALDYLNSKAVVFIHDFQRPHYWDAIK----HYRIVDIIGNMAALEKNNSLCREKDRY 188          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A0L0FM48 (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FM48_9EUKA)

HSP 1 Score: 91.7 bits (226), Expect = 9.770e-18
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 0
Query:  103 EVNLVLR-YMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKA--ISSRPELKHLRYHCVPVKRGTNG-WGRK------SAFEEGSYKAF---KPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIG-KNSVVIVHDAERIWTWRSYAKMSTYYDIIDSVGG 261
            E+  + R Y+++   Y+EWG+GGSTY F    K   SIE+++ WC+ M     +        L Y C P++   +G +G        S+  EG++  F     Y++ ++ L  + +DV+L+DGR RV  A+KAL+Y+  K  V+ +HD +R W    Y  +  YYD I+ V G
Sbjct:  113 EIQTLFRSYLNSSVEYLEWGTGGSTYQFYDQVKHMTSIENNEEWCNIMLNTSHVKCGQSTGQLDYFC-PMRNALSGPYGVPLYDSIISSHAEGNHTGFFNYHKYVNILDYLPNEYYDVILVDGRFRVACALKALAYVRPKTGVLAIHDYQRPW----YHVVEKYYDKIEEVVG 280          
BLAST of Ggra5090.t1 vs. uniprot
Match: L8HF44 (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HF44_ACACA)

HSP 1 Score: 90.1 bits (222), Expect = 1.920e-17
Identity = 52/149 (34.90%), Postives = 80/149 (53.69%), Query Frame = 0
Query:   96 SIWMGD-----FEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMAKAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAER 239
            ++WM D     F   L  R    +  Y+EWG GGST    +  ++  +IEH++ WC  + + +  +  + ++   C  V+    G   +    +G+Y+ F  Y+D I+ L    FDVV IDGRARV  A KAL YI  +SV++VHD +R
Sbjct:   98 AMWMHDKYQKTFVDTLTRR---KIKQYLEWGGGGSTLCSSRLVEQVTTIEHNEEWCKLLREQLQDK-NVTNVNLICSAVEWTQFGTSPEG---DGTYEEFHDYVDAIDTLDIPHFDVVFIDGRARVPCAKKALGYISSDSVLMVHDFQR 239          
BLAST of Ggra5090.t1 vs. uniprot
Match: A0A7S3Z9F8 (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9F8_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 1.290e-15
Identity = 59/201 (29.35%), Postives = 102/201 (50.75%), Query Frame = 0
Query:   82 QRSMVEKQKHVDYNSIWMGDFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFA-KRAYSIEHDQTWCSRMAKA--ISSRPELKHLRYHCVPVK--RGTNGWGRKSAF---EEGSYKAFKPYIDHIEKLGEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDA-ERIWTWRSYAKMSTYYDIIDSVGGKTRQGLAVLRRK 273
            Q    +  + ++   ++  +FE  +         TY+EWG G ST  +P  A K+A++I++   WC  + K+  +    + K L++ C  VK   GT+    K      +  +  A   Y++ ++K+G + +DV L+DGR RV  A+K L Y+ + S++ VHD  ER      Y ++  +YD+I    G+TR  +A  R K
Sbjct:  317 QGDCADLARKMEMPMMFADEFEFAVKTMINRKPETYLEWGCGKSTSFYPLLASKKAHAIDNYPEWCETVRKSPVVRCLEDAKRLQFFCETVKWPNGTDIPVGKLGLPINKNDTVAAAMSYVNFVDKIGLRHYDVALVDGRFRVACALKLLGYLDRKSILFVHDFWERALRLPDYREILKWYDVI----GRTRS-IAAFRMK 512          
The following BLAST results are available for this feature:
BLAST of Ggra5090.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7931.440e-10558.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P5L45.830e-4443.96Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P3955.220e-3941.01Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P1R99.960e-2837.36Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A819YN231.910e-2537.11Hypothetical protein n=4 Tax=Adineta steineri TaxI... [more]
A0A7S1WZJ54.490e-2132.42Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A1G2ITZ99.190e-1931.35Uncharacterized protein n=1 Tax=Candidatus Staskaw... [more]
A0A0L0FM489.770e-1833.53Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
L8HF441.920e-1734.90Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A7S3Z9F81.290e-1529.35Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 85..284
e-value: 1.1E-39
score: 137.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..43
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:434634..435533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5090.t1Ggra5090.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 434634..435533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5090.t1 ID=Ggra5090.t1|Name=Ggra5090.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MQNTAVRFMIRTERPKLSMQHIRVDVLLLIACSAVLLLVTVFKYEGIISY
PSAAFTTEQTKIIAPIITETMPDPLHNLSRFQRSMVEKQKHVDYNSIWMG
DFEVNLVLRYMDNVTTYVEWGSGGSTYNFPQFAKRAYSIEHDQTWCSRMA
KAISSRPELKHLRYHCVPVKRGTNGWGRKSAFEEGSYKAFKPYIDHIEKL
GEKKFDVVLIDGRARVDAAIKALSYIGKNSVVIVHDAERIWTWRSYAKMS
TYYDIIDSVGGKTRQGLAVLRRKSKYSTLEGNHAAVQKILDNKYPTIKA*
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