Ggra5078.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5078.t1
Unique NameGgra5078.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length201
Homology
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A2V3JDU5 (5'(3')-deoxyribonucleotidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JDU5_9FLOR)

HSP 1 Score: 341 bits (875), Expect = 9.120e-118
Identity = 158/198 (79.80%), Postives = 178/198 (89.90%), Query Frame = 0
Query:    1 MAPVIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKNLPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKSGDLPVGVTRAHNWKEVMDRL 198
            MAPVIAVDLDEVLGDFVSPLCSFHNE+YGT LKR+DFFSYRFC+VWGGND QATEKVHDFFK+ YFKN PVIPGAQE L +LR LGFELVVVTSRQFKIA DTR WL  +FP GTFK++AFGNHWGLEG KVTK +LCQ+LGAS+LIDDSL+Y +EVSQ GIK +LFDLDGKYPWNK+ +LPVGVTR H+W +V+DR+
Sbjct:    1 MAPVIAVDLDEVLGDFVSPLCSFHNEKYGTRLKRADFFSYRFCEVWGGNDVQATEKVHDFFKTPYFKNQPVIPGAQEALPKLRGLGFELVVVTSRQFKIAQDTRMWLEHNFPKGTFKDVAFGNHWGLEGHKVTKKELCQKLGASLLIDDSLSYIQEVSQCGIKGLLFDLDGKYPWNKTSELPVGVTRVHSWDQVVDRV 198          
BLAST of Ggra5078.t1 vs. uniprot
Match: F2TZR2 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZR2_SALR5)

HSP 1 Score: 215 bits (548), Expect = 7.720e-68
Identity = 109/199 (54.77%), Postives = 141/199 (70.85%), Query Frame = 0
Query:    3 PVIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKN-LPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKSGD--LPVGVTRAHNWKEVMDRL 198
            PVIAVDLDEVLG FV  LC FHN++YGT+ K SDF SY F DVWGG   ++++KVHDF +S +FKN L ++PGAQE L +L E  ++LV+VTSRQ  IA +T EW+  HFP+ TFK I FGNHWGL G+K +K ++C  +GA+VLIDD+L YA+E +    K +LF   G+Y WN + D  LP GV R  +W  V+  L
Sbjct:   14 PVIAVDLDEVLGYFVDALCEFHNDKYGTTYKASDFHSYTFQDVWGGTKEESSKKVHDFLESKHFKNGLRLVPGAQEALAKLAE-KYDLVIVTSRQHIIAPETHEWVETHFPN-TFKSILFGNHWGLHGEKKSKPEMCTAIGAAVLIDDALHYARECAGHLQKVLLF---GEYSWNAADDTALPEGVVRVRDWDAVLSTL 207          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A5J4Z4V3 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4V3_PORPP)

HSP 1 Score: 203 bits (517), Expect = 6.650e-63
Identity = 105/223 (47.09%), Postives = 140/223 (62.78%), Query Frame = 0
Query:    5 IAVDLDEVLGDFVSPLCSFHNERYGTS------------------LKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKNLPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKSGDLP-----------VGVTRAHNWKEVMDRL 198
            +AVDLDEVL +FV  LC+FHNERYG                    L  S F SY F +VWGG + +A  KVH+FF S +F N+ V+PGA + + RLRE  + LVVVTSRQ  I  +TR WL + FP+  F ++ FGNHWGL G+K++K +LC+ +GA+ +IDD+LTYAK+ + SGI+ +LFDLDGKYPWNK G              + + R  +W +V D L
Sbjct:    9 LAVDLDEVLCEFVEALCAFHNERYGPCTASESENVGGAASGNAEMLSVSSFHSYVFSEVWGGTNLEAQIKVHEFFGSPHFLNIRVVPGAMDGIGRLRE-KYRLVVVTSRQLVIEKETRAWLDQFFPA-VFDQVVFGNHWGLTGQKLSKPELCKAVGATTIIDDNLTYAKQCASSGIRVLLFDLDGKYPWNKDGTTAQLDQLSNQEDRLPIQRVFSWDQVCDLL 229          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A842UXV1 (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A842UXV1_9ARCH)

HSP 1 Score: 189 bits (481), Expect = 5.380e-58
Identity = 92/194 (47.42%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    5 IAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKNLPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKSGDLPVGVTRAHNWKEVMDRL 198
            I +DLDEVL DF+  L  +HN  YGTSL R  F SYRF + WGG   +A +KV+DF K+ YFKN+  + G+QE +  L++   +LVVVTSRQ  +A+ TREW+++HFPS  F E+ F NH+   G   TK ++C  LG  VLI+DS  YA E   S  K +L D     PWN+S +LP G+ R ++WKE++D +
Sbjct:    3 IGIDLDEVLADFLPALIEYHNVTYGTSLDREQFQSYRFWETWGGTKEEAIQKVYDFHKTPYFKNMKAVLGSQEAVSILKQNN-DLVVVTSRQDDVAEATREWITQHFPS-VFSEVYFANHYSQNGSSTTKKKICDSLGIDVLIEDSPEYALECFNSKRKILLLDC----PWNRSSELPQGIYRVNSWKEIIDSI 190          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A8J4EW32 (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EW32_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 9.100e-56
Identity = 96/200 (48.00%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    5 IAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKN-LPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNK----SGDLPVGVTRAHNWKEVMDRLA 199
            IAVD+DEVLG FV  L  F  ++YG      D++ Y F  +WG +  ++ + VH+FF+S YF+  +PVIPGA E L RL E  +ELVVVTSRQ  I D+T EWL +H+  G F+E+ FGNH+ LEGK  TK  +C+ +GA VLIDD+ +YA E + +GI  +L+D DG YPW+K        P  +    NWKEV  +LA
Sbjct:   92 IAVDVDEVLGRFVYALNKFCKDQYGMEYGVGDYWIYEFAKIWGCSQARSNQIVHEFFESDYFREGIPVIPGALEALTRLSEADYELVVVTSRQHVIQDETLEWLDRHY-GGLFEEVYFGNHFALEGKSRTKSDICRTIGARVLIDDNPSYALECAAAGIHVLLYDWDGAYPWSKLPSSGAHNPELIRVVRNWKEVETQLA 290          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A0G4FLQ2 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLQ2_VITBC)

HSP 1 Score: 182 bits (462), Expect = 1.680e-54
Identity = 87/199 (43.72%), Postives = 131/199 (65.83%), Query Frame = 0
Query:    3 PVIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKNLPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEG--KKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKSGDLP-VGVTRAHNWKEVMDRL 198
            P++A+D+DEVL  F+  + +FHN+ Y TS + +DF SY F +VWGG+     +KVHDFF++ YF+NL ++PGA E + RLR+  F LVVVTSRQ  I +++  WL +HFP G F+++ FGNH+ + G  +K TK ++C+++ A  L+DD+ +Y ++      K ILFDLD  Y WN+  DL      R  +W+ V+  L
Sbjct:    7 PIVAIDMDEVLCQFLKGMIAFHNKHYHTSYQVADFHSYLFYEVWGGSYADTLKKVHDFFETDYFRNLEIVPGAVEGIHRLRD-RFRLVVVTSRQTSIQEESMRWLDRHFP-GVFEDVLFGNHFSINGHEEKRTKREMCEEVNAIALVDDAPSYIEDARHCLQKAILFDLDKSYGWNQKADLSHPNTVRCTDWEGVVREL 203          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A1S3BQG9 (uncharacterized protein LOC103492406 isoform X1 n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3BQG9_CUCME)

HSP 1 Score: 181 bits (458), Expect = 9.350e-53
Identity = 95/199 (47.74%), Postives = 132/199 (66.33%), Query Frame = 0
Query:    4 VIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKN-LPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKS--GDLPVGVTRAHNWKEVMDRLA 199
            V+AVD+DEVLG+FVS L  F  + Y +    S++  Y F  +W  +  +A  +VH+FFK+ YFK  +  IPGAQ TL +L      L VVTSRQ  I + T EW+ KH+P G F+EI FGNH+ L+G+  +K ++C+ LGASVLIDD+  YA E +++GI+ +LFD +  YPW K+  G+LP  VT+ HNW+EV   LA
Sbjct:  128 VVAVDIDEVLGNFVSALNKFVADHYSSHHSVSEYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFC-HLSVVTSRQNAIKEHTLEWIEKHYP-GLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECGNLPPLVTKVHNWEEVEKHLA 324          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A0A0LX27 (Uncharacterized protein n=2 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LX27_CUCSA)

HSP 1 Score: 181 bits (459), Expect = 1.090e-52
Identity = 95/199 (47.74%), Postives = 133/199 (66.83%), Query Frame = 0
Query:    4 VIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKN-LPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNKS--GDLPVGVTRAHNWKEVMDRLA 199
            V+AVD+DEVLG+FVS L  F  +RY ++   S++  Y F  +W  +  +A  +VH+FFK+ YFK  +  IPGAQ TL +L      L VVTSRQ  I + T EW+ KH+  G F+EI FGNH+ L+G+  +K ++C+  GASVLIDD+  YA E +++GI+ +LFD +  YPW K+  GDLP  VT+ HNW+EV  +LA
Sbjct:  146 VVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFC-HLSVVTSRQNAIKEHTLEWIEKHYQ-GLFQEIHFGNHFALDGESRSKAEICKSFGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECGDLPPLVTKVHNWEEVEKQLA 342          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A6J1D1L1 (uncharacterized protein LOC111016509 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D1L1_MOMCH)

HSP 1 Score: 179 bits (455), Expect = 3.600e-52
Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 0
Query:    4 VIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYFKN-LPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNK--SGDLPVGVTRAHNWKEVMDRL 198
            ++AVD+DEVLG+FVS L  F  +RY ++   S++  Y F  +W  +  +A  +VH+FFK+ YFK  +  IPGAQ TL +L      L VVTSRQ  I D T EW+ KH+P G F+EI FGNH+ L+G+  +K ++C+ LGASVLIDD+  YA E +++GI+ +LFD +  YPW K  S DLP  VT+  NW++V  +L
Sbjct:  139 IVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANVRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFC-HLSVVTSRQNAIKDHTLEWIEKHYP-GLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTESEDLPPLVTKVQNWEDVEKQL 334          
BLAST of Ggra5078.t1 vs. uniprot
Match: A0A699YWJ3 (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YWJ3_HAELA)

HSP 1 Score: 179 bits (453), Expect = 6.990e-52
Identity = 92/198 (46.46%), Postives = 127/198 (64.14%), Query Frame = 0
Query:    5 IAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGNDRQATEKVHDFFKSSYF-KNLPVIPGAQETLFRLRELGFELVVVTSRQFKIADDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDSLTYAKEVSQSGIKCILFDLDGKYPWNK--SGDLPVGVTRAHNWKEVMDRLA 199
            +AVD+DEVLG FV  L  F  +RYG     SD++ Y F  +WG N   +   VH+FFKS +F + +PVIPGA ++L RL E   +LVVVTSRQ  I D T +W+  H+P G F+E+ FGNHW L G    K ++CQ +GASVL+DD+  YA E + +GI  +L+D +  YPW+K  +G     ++  H+W+EV  RLA
Sbjct:   98 VAVDVDEVLGRFVFALNHFCKDRYGMHHTVSDYWVYEFAKIWGCNQDHSNHIVHEFFKSEHFMRGIPVIPGAYDSLVRLSETC-DLVVVTSRQHVIQDQTLDWIDAHYP-GVFQEVYFGNHWSLSGPTRKKSEICQAVGASVLVDDNPGYAMECAAAGIHVLLYDWEQAYPWSKLAAGQHNPLISVVHDWQEVEQRLA 293          
The following BLAST results are available for this feature:
BLAST of Ggra5078.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3JDU59.120e-11879.805'(3')-deoxyribonucleotidase n=1 Tax=Gracilariopsi... [more]
F2TZR27.720e-6854.77Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A5J4Z4V36.650e-6347.09Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A842UXV15.380e-5847.42Uncharacterized protein n=1 Tax=Candidatus Woesear... [more]
A0A8J4EW329.100e-5648.00Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A0G4FLQ21.680e-5443.72Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A1S3BQG99.350e-5347.74uncharacterized protein LOC103492406 isoform X1 n=... [more]
A0A0A0LX271.090e-5247.74Uncharacterized protein n=2 Tax=Cucumis sativus Ta... [more]
A0A6J1D1L13.600e-5247.47uncharacterized protein LOC111016509 n=1 Tax=Momor... [more]
A0A699YWJ36.990e-5246.46Uncharacterized protein (Fragment) n=1 Tax=Haemato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 52..199
e-value: 6.1E-25
score: 89.4
IPR0107085'(3')-deoxyribonucleotidasePFAMPF06941NT5Ccoord: 3..196
e-value: 7.9E-19
score: 68.2
NoneNo IPR availablePANTHERPTHR35134NUCLEOTIDASE YQFW-RELATEDcoord: 4..198
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 1..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:407630..408324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5078.t1Ggra5078.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 407630..408324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5078.t1 ID=Ggra5078.t1|Name=Ggra5078.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=201bp
MAPVIAVDLDEVLGDFVSPLCSFHNERYGTSLKRSDFFSYRFCDVWGGND
RQATEKVHDFFKSSYFKNLPVIPGAQETLFRLRELGFELVVVTSRQFKIA
DDTREWLSKHFPSGTFKEIAFGNHWGLEGKKVTKLQLCQQLGASVLIDDS
LTYAKEVSQSGIKCILFDLDGKYPWNKSGDLPVGVTRAHNWKEVMDRLAF
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR0107085'(3')-deoxyribonucleotidase
IPR036412HAD-like_sf