Ggra507.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra507.t1
Unique NameGgra507.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length153
Homology
BLAST of Ggra507.t1 vs. uniprot
Match: A0A2V3IX05 (WD repeat-containing protein JIP5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX05_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 6.470e-22
Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 0
Query:   91 SFGAAMPAHVDRFYGHPEAVNVVIPWEEDEDVVISASSDGIIRVIDFPSRKLVGVLDYPTH 151
            S+     AHVDRFYGHPEAVNVV+ WEE+ED+V+SASSDGI+R+ID P+RKLVGVL+Y  H
Sbjct:  243 SYDPDSAAHVDRFYGHPEAVNVVMAWEEEEDIVLSASSDGIVRIIDIPNRKLVGVLEYAVH 303          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A2V3IY62 (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY62_9FLOR)

HSP 1 Score: 78.2 bits (191), Expect = 5.680e-14
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   14 AFFAPSRLPPAP--PQPVHRRHAVPVAVSSPPVVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHVDR 102
            AF AP+ LP     P+   RR  +P A +S P VTV DYGA NVRSL NAL L D  I++  +A    +AS+LIFPG+GSFGAAM    DR
Sbjct:    5 AFVAPTPLPSTAVAPRAHRRRRLLPSACASRPSVTVLDYGAGNVRSLENALRLFDCHIRWANTASDISNASKLIFPGVGSFGAAMENLHDR 95          
BLAST of Ggra507.t1 vs. uniprot
Match: R7QNY0 (GATase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNY0_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 1.780e-10
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    4 LPQSLSPVAFAFFAPSRLPPAPPQPVHRRHAVPVAVSSPPVVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAM 96
            LP +   ++ AFF+P  LP  P     RR +          VTV DYGA NVRSL NA+ LL  DI + T+     +AS+LIFPG+GSFGAAM
Sbjct:  111 LPTAPPRLSMAFFSPPVLPLRP----SRRRSPNRCTPRASTVTVLDYGAGNVRSLENAVRLLGHDIHWATTPADIANASKLIFPGVGSFGAAM 199          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A7S2ZP70 (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZP70_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 1.110e-7
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   45 VTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHVDRFYGHPEA 109
            VT+ DYGA NVRSL NAL  L  D ++  + +   SA +LIFPG+GSFGAAM     + +  P A
Sbjct:   33 VTILDYGAGNVRSLENALRRLGHDFKWAQTPEDILSAEKLIFPGVGSFGAAMENLDSKNFSEPLA 97          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A1S3W010 (Imidazole glycerol phosphate synthase hisHF n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3W010_VIGRR)

HSP 1 Score: 59.3 bits (142), Expect = 2.070e-7
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   30 HRRHAVPVAVSSPPVVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAM 96
            HR  +V  + S   VVT+ DYGA NVRS+ NA+  L  +I+   +     +ASRL+FPG+G+F AAM
Sbjct:   36 HRNFSVRASSSGDSVVTLLDYGAGNVRSVRNAIRFLGFEIKDVQTPQDILNASRLVFPGVGAFAAAM 102          
BLAST of Ggra507.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: imidazole glycerol phosphate synthase hisHF-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E20C0 (LOW QUALITY PROTEIN: imidazole glycerol phosphate synthase hisHF-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E20C0)

HSP 1 Score: 58.9 bits (141), Expect = 2.790e-7
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   45 VTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHVDRFYGHP 107
            VTV DYGA NVRSL NA+  L  D+ +  + D    A +LIFPG+GSFGAAM     R +  P
Sbjct:   10 VTVVDYGAGNVRSLENAVRKLGFDVLWAKTPDDIYRADKLIFPGVGSFGAAMANLEHRGFVEP 72          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A833QYT9 (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QYT9_9POAL)

HSP 1 Score: 58.9 bits (141), Expect = 2.830e-7
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   40 SSPPVVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAM 96
            SS   VT+ DYGA NVRS+ NA+H L   I+    A+   SA RL+FPG+G+FGAAM
Sbjct:   38 SSHQTVTLFDYGAGNVRSVRNAIHHLGFHIRDVQKAEDIMSADRLVFPGVGAFGAAM 94          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A2N5SCT6 (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SCT6_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 2.840e-7
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   44 VVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHVDRFYGHP 107
            ++ + DYGA NVRSL N+++ L    ++ TS D  +SAS+LIFPG+G+FG AM A   + Y  P
Sbjct:   42 MIYLLDYGAGNVRSLANSINRLGFQFKWVTSPDDIKSASKLIFPGVGAFGPAMEALRAKGYDTP 105          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A371GVE1 (Imidazole glycerol phosphate synthase hisHF n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A371GVE1_MUCPR)

HSP 1 Score: 58.5 bits (140), Expect = 3.820e-7
Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   31 RRHAVPVAVSSPPVVTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAM 96
            R  +V  + S   VVT+ DYGA NVRS+ NA+  L  DI+   + +   +ASRL+FPG+G+F AAM
Sbjct:   38 RNFSVRASSSGDSVVTLLDYGAGNVRSVRNAIRFLGFDIKDVQTPEDILNASRLVFPGVGAFAAAM 103          
BLAST of Ggra507.t1 vs. uniprot
Match: A0A7S0FZ57 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ57_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 5.950e-7
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   45 VTVRDYGAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHVDRFYGHPEA 109
            VT+ DYGA NVRSL NAL  L  D ++  + +   +A +LIFPG+GS GAAM     + +  P A
Sbjct:    1 VTILDYGAGNVRSLENALRRLGHDFKWAQTPEDILAAEKLIFPGVGSLGAAMENLNKKNFSEPLA 65          
The following BLAST results are available for this feature:
BLAST of Ggra507.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3IX056.470e-2270.49WD repeat-containing protein JIP5 n=1 Tax=Gracilar... [more]
A0A2V3IY625.680e-1452.75Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
R7QNY01.780e-1047.31GATase domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S2ZP701.110e-749.23Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A1S3W0102.070e-746.27Imidazole glycerol phosphate synthase hisHF n=5 Ta... [more]
LOW QUALITY PROTEIN: imidazole glycerol phosphate synthase hisHF-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E20C02.790e-750.79LOW QUALITY PROTEIN: imidazole glycerol phosphate ... [more]
A0A833QYT92.830e-754.39Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A2N5SCT62.840e-746.88Imidazole glycerol phosphate synthase hisHF n=2 Ta... [more]
A0A371GVE13.820e-746.97Imidazole glycerol phosphate synthase hisHF n=3 Ta... [more]
A0A7S0FZ575.950e-746.15Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029062Class I glutamine amidotransferase-likeGENE3D3.40.50.880coord: 40..114
e-value: 2.5E-8
score: 35.6
IPR029062Class I glutamine amidotransferase-likeSUPERFAMILY52317Class I glutamine amidotransferase-likecoord: 45..113
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 102..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000238_piloncontigtig00000238_pilon:51345..52772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra507.t1Ggra507.t1Gracilaria gracilis GNS1m malemRNAtig00000238_pilon 51345..52772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra507.t1 ID=Ggra507.t1|Name=Ggra507.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MSQLPQSLSPVAFAFFAPSRLPPAPPQPVHRRHAVPVAVSSPPVVTVRDY
GAVNVRSLHNALHLLDVDIQYDTSADHNRSASRLIFPGIGSFGAAMPAHV
DRFYGHPEAVNVVIPWEEDEDVVISASSDGIIRVIDFPSRKLVGVLDYPT
HM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029062Class_I_gatase-like
IPR036322WD40_repeat_dom_sf