Ggra5049.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5049.t1
Unique NameGgra5049.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length124
Homology
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BLAST of Ggra5049.t1 vs. uniprot
Match: A0A2V3J842 (BAG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J842_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 1.820e-31
Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 0 
Query:    1 MVDAADKAIDELRTRVANLEQRVASLSPGESDEQVDTDTSPSSTPPPSQTA--LIIAESITQALLQLDNVHISKEAAAQALRNGDRQTSRRISVLLARRKTLVRKLNNLGEQIDSL 114
            M DAA++AI ++R RV+ +E  +A+L          T T P  TPPP  +A    ++E+ITQALLQLDN+HIS+E+AA+ALRNGDRQ S RISVLLARRKTLVRKLN LG+++DSL
Sbjct:    1 MEDAAERAISDVRQRVSQIESDLAAL----------TSTQPPPTPPPDASAPQTTLSEAITQALLQLDNIHISRESAAEALRNGDRQRSARISVLLARRKTLVRKLNALGDRLDSL 106
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BLAST of Ggra5049.t1 vs. uniprot
Match: A0A1X6NN37 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN37_PORUM)

HSP 1 Score: 63.2 bits (152), Expect = 3.070e-10
Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:   53 IIAESITQALLQLDNVHISKEAAAQALRNGDRQTSRRISVLLARRKTLVRKLNNLGEQIDSLTQPQEQPQP 123
            I++E +TQ ++++D+V +S+EA A A+R GDR  + R++ LL RRK ++ + N LG+ +D+L Q +  PQP
Sbjct:   52 ILSERLTQFIIRIDSVEMSREAVAAAMRAGDRALATRVAALLTRRKRIIWRANGLGDVLDALAQGKPLPQP 122
The following BLAST results are available for this feature:
BLAST of Ggra5049.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J8421.820e-3158.62BAG domain-containing protein n=1 Tax=Gracilariops... [more]
A0A1X6NN373.070e-1042.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..50
IPR036533BAG domain superfamilyGENE3D1.20.58.120BAG domaincoord: 1..120
e-value: 6.3E-8
score: 34.7
IPR036533BAG domain superfamilySUPERFAMILY63491BAG domaincoord: 5..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:336226..336597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5049.t1Ggra5049.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 336226..336597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5049.t1 ID=Ggra5049.t1|Name=Ggra5049.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=124bp
MVDAADKAIDELRTRVANLEQRVASLSPGESDEQVDTDTSPSSTPPPSQT
ALIIAESITQALLQLDNVHISKEAAAQALRNGDRQTSRRISVLLARRKTL
VRKLNNLGEQIDSLTQPQEQPQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036533BAG_dom_sf