Ggra5020.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5020.t1
Unique NameGgra5020.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Homology
BLAST of Ggra5020.t1 vs. uniprot
Match: R7QST3 (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QST3_CHOCR)

HSP 1 Score: 134 bits (338), Expect = 6.130e-38
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELNKRECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVPVQKVIQTTDPSEISYACLKAQIAK 140
            MA+GIAI+ KC++AY  L+KRE   ++LKI+ D S V +++ +     DLE  WK  V  LP    RY+++DF WKETPTVTKSK++MI W+ E  PVR R + A+S E V +K+ VQK IQ  +  +I+Y  +K  + K
Sbjct:    1 MASGIAIADKCVEAYKALSKREYGSIILKINDDMSEVGVDKCMPPSAGDLETEWKNLVSGLPENGCRYIISDFSWKETPTVTKSKIIMILWSAEYAPVRHRTVYAASKESVATKMAVQKSIQAVELEDIAYLAIKRDVTK 140          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A2V3J6Q4 (Actin-depolymerizing factor 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q4_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 5.380e-34
Identity = 61/140 (43.57%), Postives = 94/140 (67.14%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELNKRECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVPVQKVIQTTDPSEISYACLKAQIAK 140
            MA+GIA+S KCIDAY+ L K E + ++LKI+     ++LE T      + E  WK FV+ LP   ARY+++DF  KETPTV+K+K++++ W P+  P+R +++ A+S+E +T+KV  QK IQ TD  +I Y+ +K  + K
Sbjct:    1 MASGIAVSDKCIDAYTALRKSEYSRVILKITDAADLIELESTHLRSAKEPEEDWKDFVKSLPEDSARYIISDFTVKETPTVSKAKILVLLWNPDGAPIRSKLLYAASVEALTAKVQPQKYIQATDTDDIEYSVVKNALFK 140          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A1X6P6I6 (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 116 bits (291), Expect = 8.650e-31
Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELNK-RECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVP-VQKVIQTTDPSEISYACLKAQIAK 140
            MA+GIA++ KCI  Y  L++ R    ++LKI+ D S V ++  +     D E  WK FV+ LP ++ RY+V DF WK+ PTVTKSK+ +I W+PE + VR +MI A+S E V SK+  VQ+ +Q T+  E+ Y  +K Q+AK
Sbjct:    1 MASGIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A5J4Z6P4 (Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6P4_PORPP)

HSP 1 Score: 80.9 bits (198), Expect = 9.400e-17
Identity = 49/142 (34.51%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSEL-NKRECACLVLKISRDTSSVDLERTVTSFGADLEAG--WKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVP-VQKVIQTTDPSEISYACLKAQI 138
            MA+ I + +K    +  L +  +   ++ KI+ D +SV++E T+ +    ++ G  +K+ V+ LP    RY++ DF W+ + T+T SKV++I W+ E + VR++MI ASS E + + VP +Q+ +Q TD  EISY  +  +I
Sbjct:    1 MASNINVPEKLKAEFDGLVHGHKYRAVIAKITPDFTSVEVESTLPALQDMVDPGPAYKEMVDMLPEHGCRYILYDFQWQSSATITHSKVILILWSSETSKVREKMIYASSQECILNAVPDIQRQVQATDEDEISYPVVLKRI 142          
BLAST of Ggra5020.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A42F (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A42F)

HSP 1 Score: 75.5 bits (184), Expect = 1.010e-14
Identity = 43/142 (30.28%), Postives = 87/142 (61.27%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELNK-RECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVT-SKVPVQKVIQTTDPSEISYACLKAQIAK 140
            MA+G+A++  C++A+ EL   ++   L+  IS+D + + +E+  TS   D      +FV DLP AE R+ + DF +++     ++K+  I+W+P+++ V+Q+M+ ASS + +  + V +   IQ TD SE+++  +  ++++
Sbjct:    1 MASGVAVNPACLEAFQELKLGKKTKYLIFAISKDLTEIVVEKKSTSTSYD------EFVADLPEAECRWAIYDFEFEKEGAGIRNKICFISWSPDDSKVKQKMLFASSKDALRRALVGIAAEIQATDFSEVAHESVLDKVSR 136          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A167MJP4 (Cofilin n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167MJP4_PHYB8)

HSP 1 Score: 72.8 bits (177), Expect = 1.120e-13
Identity = 43/133 (32.33%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELN-KRECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSK-VPVQKVIQTTDPSEISY 131
            M+TG+A+S +CID YSE   +++   ++ K++ D   + +E+   +        ++ F+E LP+ E RY V DF +++     +SK+    W P+ + VRQ+M+ A+S + +  K V +   IQ TD SE+ Y
Sbjct:    1 MSTGVAVSDECIDLYSEFKLRKKYKYIIFKLADDNKEIIVEKKAET------GNYEDFLECLPSDEPRYAVYDFEYEKPGEGQRSKITFYAWIPDTSKVRQKMLYAASKDALRKKLVGLAIEIQGTDLSEVDY 127          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A6U9RC41 (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RC41_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 1.520e-13
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 0
Query:    2 ATGIAISQKCIDAYSELN-KRECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVP-VQKVIQTTDPSEI 129
            A+G+A+ Q+C+  +  L  +R    ++ KI   T  V +E+      A  +A +++F E+LP AE RY V D+P+K+     K+K+  ++W+PE + V+ +M+ ASS E    ++  V   +Q TD SEI
Sbjct:   68 ASGVAVDQECVKMFMNLKTRRTYRYIIFKIDEQTGMVKVEKE-----AGPKATFEEFQENLPEAECRYAVIDYPFKDKEGCQKTKIFFVSWSPEISKVKSKMLYASSKEKFRRELDGVHLELQATDDSEI 192          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A8J4PM45 (Uncharacterized protein n=2 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM45_9MYCE)

HSP 1 Score: 72.4 bits (176), Expect = 1.650e-13
Identity = 40/134 (29.85%), Postives = 75/134 (55.97%), Query Frame = 0
Query:    1 MATGIAISQKCIDAYSELNK--RECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVT-SKVPVQKVIQTTDPSEISY 131
            M++G+ IS +C+  +++  K  +    +  K+ + +  + +E+T+       E  ++  V +LP  E RY+  D+ +K    VTKSK++ ++W P  TP+R RM+  SSL+ +  + V +   IQ +D SE S+
Sbjct:    1 MSSGVQISSECVPVFNDSLKLGKSIRAIFYKLDQKSEKITVEKTIPR----QETNFETIVGELPLQEPRYVTIDYEYKSEDNVTKSKIIFLSWCPNGTPIRARMLHTSSLQSIRRALVGINFEIQASDFSECSH 130          
BLAST of Ggra5020.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D03EA7B (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D03EA7B)

HSP 1 Score: 71.2 bits (173), Expect = 5.410e-13
Identity = 41/132 (31.06%), Postives = 77/132 (58.33%), Query Frame = 0
Query:    3 TGIAISQKCIDAYSELNK-RECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWK-ETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVP-VQKVIQTTDPSEISY 131
            T + ++++C+ A+ EL   ++   ++ K+S D  ++++E++ T      E  ++ F+ DLP  E RY + DF +  E    T++K+   TW+P++ PVR +M+ ASS E +   +  +   IQ TD SE+S+
Sbjct:   12 TRVGLAKECVPAFEELKLGKKIKYIIFKLSDDKKNIEVEKSST------ECDYETFIGDLPETECRYAIYDFEYDLEGGEGTRNKICFYTWSPDDAPVRSKMVYASSKEALRRSLQGIHAEIQGTDYSEVSH 137          
BLAST of Ggra5020.t1 vs. uniprot
Match: A0A1R3IA67 (Actin-binding, cofilin/tropomyosin type n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3IA67_COCAP)

HSP 1 Score: 67.8 bits (164), Expect = 9.820e-12
Identity = 43/138 (31.16%), Postives = 72/138 (52.17%), Query Frame = 0
Query:    2 ATGIAISQKCIDAYSEL-NKRECACLVLKISRDTSSVDLERTVTSFGADLEAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQRMISASSLEHVTSKVP-VQKVIQTTDPSEISYACLKAQ 137
            A+G+A++ +C   + EL +KR    +V KI      V +++       D    +   +  LP  E RY V DF +       KSK+  I+W+P+ + VR +M+ ASS +    ++  VQ  +Q TDPSE+S+  +K +
Sbjct:    5 ASGMAVNDECKRKFLELKSKRSYRFIVFKIEEKIQQVVIDKL-----GDTNDSYDDLIASLPANECRYAVYDFDFTTNENCQKSKIFFISWSPDSSRVRSKMLYASSKDRFRRELDGVQVELQATDPSEMSFDIVKGR 137          
The following BLAST results are available for this feature:
BLAST of Ggra5020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QST36.130e-3846.43ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3J6Q45.380e-3443.57Actin-depolymerizing factor 8 n=1 Tax=Gracilariops... [more]
A0A1X6P6I68.650e-3144.37ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A5J4Z6P49.400e-1734.51Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688... [more]
hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A42F1.010e-1430.28hypothetical protein n=1 Tax=Stereum hirsutum (str... [more]
A0A167MJP41.120e-1332.33Cofilin n=1 Tax=Phycomyces blakesleeanus (strain A... [more]
A0A6U9RC411.520e-1333.85Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A8J4PM451.650e-1329.85Uncharacterized protein n=2 Tax=Polysphondylium vi... [more]
uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D03EA7B5.410e-1331.06uncharacterized protein n=1 Tax=Morchella sextelat... [more]
A0A1R3IA679.820e-1231.16Actin-binding, cofilin/tropomyosin type n=2 Tax=Co... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 9..139
e-value: 2.1E-17
score: 73.8
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 11..136
e-value: 9.1E-25
score: 86.8
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 2..139
score: 23.297897
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..140
e-value: 1.9E-32
score: 114.1
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOG-RELATEDcoord: 3..138
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..138
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 3..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:86607..87121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5020.t1Ggra5020.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 86607..87121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5020.t1 ID=Ggra5020.t1|Name=Ggra5020.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MATGIAISQKCIDAYSELNKRECACLVLKISRDTSSVDLERTVTSFGADL
EAGWKKFVEDLPTAEARYLVTDFPWKETPTVTKSKVVMITWTPEETPVRQ
RMISASSLEHVTSKVPVQKVIQTTDPSEISYACLKAQIAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR017904ADF/Cofilin