Ggra4974.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4974.t1
Unique NameGgra4974.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length835
Homology
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A2V3IEG2 (Plant-specific TFIIB-related protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEG2_9FLOR)

HSP 1 Score: 749 bits (1933), Expect = 1.290e-258
Identity = 475/815 (58.28%), Postives = 559/815 (68.59%), Query Frame = 0
Query:    1 MLGSRKTCPNCHDTNLRRVPVNRTIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIVDDNPRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWYKAEQSTGDKKSLSDRSSGQHHQEET-VANHENEAVTASKSSVRTTDEHLLVPSVEDRREQNLPVPPPLPPGFGEQSSKSSYGKDPGPXXXXXLPPRKEQISSPVPAVNSANPLMAMMSNPAMQAFANAFSMMPQLMMXXXXXXXXXXQS-----VQAKISQNSHTEKSPSGGKGKPSSPVVKSRESSSNAAEKMKDKLNSTNTSNDGPPGMPISEGVGKQSTVGKPTMNASAPNSASTHPQDPQNVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSTNPWAAMTSLMQLQNPEVGRVMRPVTQEATAGSQSTAPDPAVKER 809
            MLGSRKTCPNCH+TNLRRV VNRT QCS CKL LEER +GDL+E HVVTQTEEAH VV PDS+  NIVDD P DPYCTPGFISVFRMLSPLREP+F TS+RT+SGAL+EMERLIGDALF+GYIGYNGRAPGGVP KKEE  DG ERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYE W ++N  K      S+  +G E E +   +++  + K  NG  D++ + +  SDI+ L E+IT EKVS+AL+LDKDD       +    A A +   Q  +  MKEEP+ES   E        D K  + W IPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVT HMPLFCRRLDL  +T++LAIGIAENAMRNNICSRRNPVSISAAAIYLACQM+GVRKTQTEICRATNLTEVTLRKV+KELNREH+A+IP+WYK+E+ +  K+ LS+    +  Q  + V+  E    +   ++  +  +    P  + + +  L VPPPLPPGFGE  SK     D    XXXX                    LMAMM NPAMQAFANAFSMMPQ+MMXXXXXXXXXX++        K +Q   T++   G      S +    E+ S AA   K +   T++ N GPP    S+      +  +  + A+   S++  PQ+ Q VMA  XXXXXXXXXXXXXXX               S +NPWA M S+MQ +    G    P  + A    ++ A + + +E+
Sbjct:    1 MLGSRKTCPNCHNTNLRRVSVNRTTQCSRCKLTLEERGIGDLAEYHVVTQTEEAHCVVAPDSMHANIVDDIPADPYCTPGFISVFRMLSPLREPVFATSARTFSGALSEMERLIGDALFSGYIGYNGRAPGGVPPKKEEASDGTERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEMWQKRNDRKAPQ--ESLEPSGPEAESIAHARNNL-DTKLENG--DFDEMQDRNSDIL-LGETITEEKVSLALSLDKDDEPGNPGYEDMTDAGADNDKTQAGNGTMKEEPMESEATEKDSRANPIDEKELESWAIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTAHMPLFCRRLDLSGRTQRLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMDGVRKTQTEICRATNLTEVTLRKVYKELNREHAAVIPSWYKSEEKSAGKEVLSEGLGARPSQGGSKVSKAEKREESVQPNAPGSLKDKEPEPENKAKCDPELLVPPPLPPGFGELPSKPLEA-DVSKPXXXXXXXXXXXXXXXXXXXXXXXXLMAMMGNPAMQAFANAFSMMPQIMMXXXXXXXXXXRTNPTTEATDKDAQAKCTKEQDVG------STLSAKVETHSKAAGSTKSRSRDTDSRNAGPPNSARSQSSESPLSAMRTVLTAAQGKSSTGLPQNTQQVMASMXXXXXXXXXXXXXXXIHKKDAEGAAAEQPDSGSNPWAFMASMMQSRTAGTGGFGDPGVENAPLNDRADAGNMSAEEK 802          
BLAST of Ggra4974.t1 vs. uniprot
Match: R7QCC1 (CYCLIN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCC1_CHOCR)

HSP 1 Score: 415 bits (1066), Expect = 1.550e-131
Identity = 255/553 (46.11%), Postives = 322/553 (58.23%), Query Frame = 0
Query:   87 MLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWYKAEQSTGDKKSLSDR----------------SSGQHHQEETVANHENEAVTASKSSVRTTDEHLLVPSVEDRREQNLP-VPPPLPPGFGEQSSKSSYGKDPGPXXXXXLPPRKEQISSPVPAVNSANPLMAMMSNPAMQAFANAFSMMPQL 622
            MLSPLREP++  S+RT SG+LAEMER+IG+ LF+GY+GYNGRAPG    KKEE  +  ERN++GGDARHTLVAYFEIVELASIL VD+ET NLA+R FRHTA+NTSLRNRNVE LATAAFV+AAERRW EY+ W ++  EK      ++P +                                                                              +E H+  ++E   +A              ++  WP  PRHLS+EEIS+AANLDV EV RYLKVV IALRKQRPE+SSS+  HMP FC RLDLP +T +LAIGIAE AM NNICSRR P S+SAAAI LACQ++GVRKTQ EICRAT +T+VTLRKVHKEL R+ S +IP WY  ++    + + S+                 SS Q  +EE+ ++ E     A  S + +  E           E N+  VPPPLPPGFG+   +    ++            +  +S P P + ++NP++AM++NPAMQAFAN F+MMPQL
Sbjct:    1 MLSPLREPVYAASARTLSGSLAEMERIIGETLFSGYVGYNGRAPGST-TKKEELQESAERNRTGGDARHTLVAYFEIVELASILCVDRETTNLAIRTFRHTANNTSLRNRNVESLATAAFVSAAERRWNEYQDWSKR--EKG-----AVPSD------------------------------------------------------------------------------KEPHLPARDEDAPAA--------------SSSEWPTVPRHLSVEEISTAANLDVAEVVRYLKVVNIALRKQRPENSSSIAAHMPTFCSRLDLPERTRRLAIGIAEKAMENNICSRRYPPSLSAAAIRLACQLDGVRKTQVEICRATPVTDVTLRKVHKELIRDESMVIPEWYTNDKRQQTEATFSETGRPFARPAAKRXXXXXSSSQEDREESPSD-EKTGPAADSSDLGSQQE-----------EPNVSLVPPPLPPGFGKGQGRPKAKRE-------EEKKAEPVVSQPQPPMPNSNPMLAMLNNPAMQAFANVFAMMPQL 434          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A7S3ABT2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABT2_9RHOD)

HSP 1 Score: 315 bits (807), Expect = 2.750e-91
Identity = 205/522 (39.27%), Postives = 258/522 (49.43%), Query Frame = 0
Query:    1 MLGSRKTCPNCHDTNLRRVPVNRTIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIVDDN-PRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPL--------------------------KKEETVDGP-------ERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            MLGS  +C +C  + LRR   NRT QC+ C+ +LEER   DL E    T TEE H VV PD L  +++D++   DPYCT GF++ FRMLSP+R+P +  ++RT+SG LAEMERLIGDAL+ GY+GYNGR PG                              K E+  +G        +   SGGDARHT+VAYF+++EL+ +L + KE    AVRIFRHTAS TSLRNRNVE LATAA V A ER  +                              L G +                  EG  D+                                                                      K +D             I+  A L   EV RYLK+V  A+++QRPE+S+S+  HMP FCRRL LP   +  A+GIAE  ++ NICSRRNP+SISAAAIYLACQ+E  +KTQ EIC+ T LTEVTLRKV+KEL R  + IIP  Y
Sbjct:    1 MLGSYSSCLSCGKSELRRNVSNRTTQCTECRTVLEERC-SDLMEYCAWTDTEEVHCVVAPDFLSKDLIDEDIEEDPYCTRGFVTAFRMLSPMRDPAYLATARTFSGDLAEMERLIGDALYGGYVGYNGRQPGMAREGSDSDKKVRAKTEVQGWRNGDIESDGKDEQFSEGKAGSFGNAQGTLSGGDARHTVVAYFQVLELSGLLEIPKEISEFAVRIFRHTASRTSLRNRNVEALATAALVCAVERTKY------------------------------LPGGA------------------EGGPDV----------------------------------------------------------------------KPSD-------------IAKVAGLTEKEVARYLKLVNTAMQRQRPETSASIAVHMPSFCRRLGLPESVQLCAVGIAEKVLKRNICSRRNPMSISAAAIYLACQLEDKKKTQQEICKVTRLTEVTLRKVNKELARNINDIIPDGY 390          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A1X6PBM2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBM2_PORUM)

HSP 1 Score: 259 bits (663), Expect = 6.440e-70
Identity = 197/556 (35.43%), Postives = 251/556 (45.14%), Query Frame = 0
Query:    3 GSRKTCPNCHDTNLRRVPVNRTIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSL---------LTNIVDD-----NPRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETV--------------------------------------DG---------PERNK---------SGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            GS  +C NC    LRR  +NRT+QC+GC  +LEER + DL E     Q EE H VV PD L         + N VD+     +  DPY TPG I+ FR+LSP REP+F +++R+ SGALAE+ER IG A+++ Y+GYNGRAPG  PL K                                          DG         P R K         + GDARHTLVAYF+IVELA +L VDK+T + AVR+FRH A++ SLRN++VE LA A+ V A +RR  E      K  +   +                                                                           AA A                           LG+        DP P P R   L ++++A  ++  E+ RY K+    L      + SSV  HMP F  RL LPA    LA  IAE A    +C+RRNPVS+SAAA+++ACQ+E VRKTQ EICRAT LTEVTLRKV KEL      ++P  Y
Sbjct:   64 GSVSSCFNCGCERLRRNVINRTVQCTGCLTMLEER-MNDLFEYAGPLQPEELHCVVTPDCLGPNEGGTAMVDNAVDEENLDADDDDPYSTPGLITAFRLLSPTREPVFASTARSVSGALAELERQIGPAIYSSYVGYNGRAPG-RPLPKSSKANAGTAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGREAKAAAASPARAKXXXXXXGPAASGDARHTLVAYFQIVELAELLDVDKDTADTAVRVFRHVAAHASLRNKSVEALAAASVVVAGQRRRSEARLHALKRSQLAAAASSXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAE--------------------------LGRH------TDP-PRPVRCPLLADVAAAVGVEPRELERYHKLAIKELVASSSAAPSSVAAHMPAFAARLKLPASVSNLATTIAERAGTLKLCTRRNPVSVSAAAVHVACQLEDVRKTQAEICRATALTEVTLRKVVKELMGRLGELVPPGY 571          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A7S1T5B5 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5B5_9RHOD)

HSP 1 Score: 184 bits (468), Expect = 1.880e-47
Identity = 128/391 (32.74%), Postives = 174/391 (44.50%), Query Frame = 0
Query:   95 LFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIP 485
            ++  ++RT+ G+LAEMERLIG +L+ GY+GYNGR  G      E          S GDARHTLVAYF+I ELA++ G+ K   +LA+R FRH AS  +LRNRNVE LATA+ V A  R  F                                                                              KD+                               + SA ++ A             W      +++E I+  +N+ + E+ RYL+++  +LR     +S     H+P    +LDLP  T +LA  I   A   N+CS+RNP SI+AAAIY+ACQ+E  +KTQ EI +A+ LTEVTLRKVHKEL      +IP
Sbjct:    2 VYAAAARTFDGSLAEMERLIGPSLYGGYVGYNGRQLGSRKALTEAEEHSAVTAASSGDARHTLVAYFQIRELAALCGIPKPVSDLAIRCFRHAASKINLRNRNVESLATASLVCALHRTRFR-----------------------------------------------------------------------------KDE-------------------------------ISSAVLKDAA------------WKAEMEEITVEHIAEVSNIPLKEILRYLQMINNSLRPSPLPTSRPPGVHIPSLGEKLDLPQSTMELAQTITAQAHAKNLCSKRNPQSIAAAAIYMACQIEDRKKTQIEISKASGLTEVTLRKVHKELTTNLHDMIP 272          
BLAST of Ggra4974.t1 vs. uniprot
Match: D8R3Z5 (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R3Z5_SELML)

HSP 1 Score: 162 bits (411), Expect = 1.450e-40
Identity = 143/492 (29.07%), Postives = 201/492 (40.85%), Query Frame = 0
Query:    8 CPNCHDTNLRRVPVNR---TIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIVDDNPR--------DPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            CP C     R  P        +C  C  +++ER V  + E+ V   T+    +V PD        DN R        DP+ + GFI+ F   S    PLFT ++ T  G LAE+ER++ +     Y        G + L     VD              L AYF+IVE++S+LG+++++   A+++FR  ++ T LRNRN+E LATAA V A+                                                                                                         AQE                                   PR  +L+EIS AAN+   E+ R++K++  AL+  +P +S+S++ HMP FC  L L   T+ LA  I E  +  + C+RRNP+SISAAAIYLACQ+E  RKTQTEIC+AT LTEVTLRKV+KEL      ++P  Y
Sbjct:    6 CPYCSGLEGRCTPSGSGRFITECKACARVVDERRV-QIHEVFVERATDTPLCIVTPD------FSDNERFRVPPLDDDPFESSGFITAFSTWSLEATPLFTNTTSTVCGHLAELERVMAEY----YPNGGANLAGSLNL-----VD-------------MLRAYFQIVEVSSVLGLERDSSEHAIQLFRDCSTATLLRNRNIEALATAALVQASRE-------------------------------------------------------------------------------------------------------AQE-----------------------------------PR--TLQEISVAANIPQKEIARHMKLLSDALKLSQPINSNSISVHMPRFCNLLQLNKTTQDLASHIGEVVISKSFCTRRNPISISAAAIYLACQLEDKRKTQTEICKATGLTEVTLRKVYKELLENLDDLMPKDY 328          
BLAST of Ggra4974.t1 vs. uniprot
Match: D8RAK8 (Uncharacterized protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RAK8_SELML)

HSP 1 Score: 162 bits (409), Expect = 2.770e-40
Identity = 143/492 (29.07%), Postives = 200/492 (40.65%), Query Frame = 0
Query:    8 CPNCHDTNLRRVPVNR---TIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIVDDNPR--------DPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            CP C     R  P        +C  C  +++ER V  + E+ V   T+    +V PD        DN R        DP+ + GFI+ F   S    PLFT ++ T  G LAE+ER++ +     Y        G + L     VD              L AYF+IVE++S+LG+++++   A+++FR  ++ T LRNRN+E LATAA V A+                                                                                                         AQE                                   PR L  +EIS AAN+   E+ R++K++  AL+  +P +S+S++ HMP FC  L L   T+ LA  I E  +  + C+RRNP+SISAAAIYLACQ+E  RKTQTEIC+AT LTEVTLRKV+KEL      ++P  Y
Sbjct:    6 CPYCSGLEGRCTPSGSGRFITECKACARVVDERRV-QIHEVFVERATDTPLCIVTPD------FSDNERFRVPPLDDDPFESSGFITAFSTWSLEATPLFTNTTSTVCGHLAELERVMAEY----YPNGGANLAGSLNL-----VD-------------MLRAYFQIVEVSSVLGLERDSSEHAIQLFRDCSTATLLRNRNIEALATAALVQASRE-------------------------------------------------------------------------------------------------------AQE-----------------------------------PRTLQ-QEISVAANIPQKEIARHMKLLSDALKLSQPINSNSISVHMPRFCNLLQLNKTTQDLASHIGEVVISKSFCTRRNPISISAAAIYLACQLEDKRKTQTEICKATGLTEVTLRKVYKELLENLDDLMPKDY 329          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A5B6VYH9 (Acidic leucine-rich nuclear phosphoprotein 32-related protein-like n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6VYH9_9ROSI)

HSP 1 Score: 171 bits (432), Expect = 6.250e-40
Identity = 147/491 (29.94%), Postives = 212/491 (43.18%), Query Frame = 0
Query:    8 CPNCHDTNLR--RVPVNRTI-QCSGCKLILEERAVGDLSEIHVVTQTEEAHFV---VPPDSLLTNIVDDNPRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAA--CASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRH--LSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            CP C     R       R+I +C+ C  ++EER   +    HV  Q      V   +P  +    I +D+P +P    GFI+ F   S    PLF  SS ++SG LAE+ER++                      +  +   P    S       L AY +I+++ASILG+D +  + A ++FR   S T LRNR+VE LATAA V A           +R+  E  T  L   P+                                         +++   K    L +       K +S K    C      +  E  + +                          W +       SL+EIS AAN+   E+ +Y+K++  AL+  +P +S+S++ HMP FC  L L    ++LA  I E  +    C+RRNP+SISAAAIYLACQ+E  RKTQ EIC+ T LTEVTLRKV+KEL      ++P+ Y
Sbjct:    3 CPYCSAAQGRCATTTTGRSITECTSCGRVVEERQFQNHHLFHVRAQDTPLCLVTSDIPAPASAYQIHEDDPFEPT---GFITAFSTWSLEPNPLFLRSSLSFSGHLAELERIL----------------------ELSSSSAPSATSSSTVVVDNLRAYMQILDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQA-----------IREAQEPRTLQLFFYPV-----------------------------------------DNLVCSKCLHILLITCGVRIGKEMSDKMLLLCILGSQLLLVEFEICILR------------------------WELSGEENCASLKEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 392          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A7S1ERX6 (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERX6_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 2.420e-38
Identity = 99/250 (39.60%), Postives = 140/250 (56.00%), Query Frame = 0
Query:    1 MLGSRKTCPNCH--DTNLRRVPVNRTIQCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIV-DDNPRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRA----PGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGL-----VSIPMN 238
            M GS + C +C    ++  R  V R IQC  C+ ++EERA   L E   ++Q+EE   VV PD +  +++ +D   DPY T  FI+ FR L P+ +P++  SSRT+SG L EMER+IGDA+++GY+GYNGRA    PG +PL    +        + GD RHT+VAYF I + A  L +    + LAV IFR    +  +RNR VE LA A+ + A ER     +    ++ E   S L     V + MN
Sbjct:   12 MYGSHRECFHCGAPSSSFIRNHVARAIQCVNCRAMIEERA-SSLIEHKSLSQSEEILCVVTPDFVTEHVLPNDLENDPYITRNFITAFRNLVPVMDPVYFPSSRTFSGELVEMERIIGDAVYSGYVGYNGRALRTAPGSMPLNSTSSASAA----TAGDTRHTIVAYFLISDAAMELNIPNSVVELAVYIFRRVLGSLVMRNRPVETLAAASLICAIERAKHRKDVIRHRDVESILSKLPDWKDVCLSMN 256          
BLAST of Ggra4974.t1 vs. uniprot
Match: A0A0K9S200 (Uncharacterized protein n=5 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9S200_SPIOL)

HSP 1 Score: 158 bits (399), Expect = 1.320e-37
Identity = 139/489 (28.43%), Postives = 193/489 (39.47%), Query Frame = 0
Query:    8 CPNCH----DTNLRRVPVNRTI-QCSGCKLILEERAVGDLSEIHVVTQTEEAHFVVPPDSLLTNIVDD---NPRDPYCTPGFISVFRMLSPLREPLFTTSSRTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSGGDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVECLATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKSSRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDKNVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPWPIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMPLFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEGVRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWY 488
            CP C     +      P  R I +C+ C  ++EER        H+  Q +++  ++    LL +       +P DP+   GFI+ F   S    PLF TSS ++SG LAE+ER +                        E       + S G     L AY +IV++ASILG+D++  + A ++FR  +S T LRNR+VE LATA  V A                                                                                                          AQE                                   PR  +L+EIS AANL   E+ +Y+K++  AL+  +P +S+S+  HMP FC  L L    ++LA  I E  +    C+RRNP+SISAAAIYLACQ+E  RKTQ EIC+ T LTEVTLRKV+KEL      ++P+ Y
Sbjct:    3 CPYCSAPPSNGRCTTTPTGRHITECTSCGRVIEERQTQTHHIFHL--QGQDSPLLLSTSDLLLSPPQPPSPDPEDPFDHTGFITAFSTWSLRHSPLFATSSLSFSGHLAELERAL------------------------EGTSVNSSSSSSGVVVDNLRAYLQIVDVASILGLDRDISDHAFQLFRDCSSATCLRNRSVEALATACLVQAIRE-------------------------------------------------------------------------------------------------------AQE-----------------------------------PR--TLQEISIAANLPQKEIGKYIKILGEALQLSQPINSNSIAVHMPRFCNLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDRRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 325          
The following BLAST results are available for this feature:
BLAST of Ggra4974.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEG21.290e-25858.28Plant-specific TFIIB-related protein 1 n=1 Tax=Gra... [more]
R7QCC11.550e-13146.11CYCLIN domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S3ABT22.750e-9139.27Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PBM26.440e-7035.43Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1T5B51.880e-4732.74Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
D8R3Z51.450e-4029.07Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
D8RAK82.770e-4029.07Uncharacterized protein (Fragment) n=1 Tax=Selagin... [more]
A0A5B6VYH96.250e-4029.94Acidic leucine-rich nuclear phosphoprotein 32-rela... [more]
A0A7S1ERX62.420e-3839.60Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A0K9S2001.320e-3728.43Uncharacterized protein n=5 Tax=Chenopodioideae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 464..478
score: 37.78
coord: 20..40
score: 24.13
coord: 398..416
score: 32.98
coord: 432..448
score: 46.67
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 8..210
coord: 358..572
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 161..276
e-value: 4.3
score: 4.2
coord: 397..478
e-value: 1.4E-9
score: 47.8
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 159..201
e-value: 0.00191879
score: 36.0625
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 399..476
e-value: 5.84941E-15
score: 68.8044
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 397..477
e-value: 5.4E-17
score: 61.6
NoneNo IPR availableGENE3D1.10.472.170coord: 6..217
e-value: 4.3E-6
score: 28.7
NoneNo IPR availableGENE3D1.10.472.10coord: 397..496
e-value: 1.4E-24
score: 88.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 623..834
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 637..654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 739..779
NoneNo IPR availablePANTHERPTHR11618:SF26PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1coord: 8..210
coord: 358..572
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 396..490
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 159..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000014_piloncontigtig00000014_pilon:211528..214224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4974.t1Ggra4974.t1Gracilaria gracilis GNS1m malemRNAtig00000014_pilon 211528..214224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4974.t1 ID=Ggra4974.t1|Name=Ggra4974.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=835bp
MLGSRKTCPNCHDTNLRRVPVNRTIQCSGCKLILEERAVGDLSEIHVVTQ
TEEAHFVVPPDSLLTNIVDDNPRDPYCTPGFISVFRMLSPLREPLFTTSS
RTYSGALAEMERLIGDALFAGYIGYNGRAPGGVPLKKEETVDGPERNKSG
GDARHTLVAYFEIVELASILGVDKETINLAVRIFRHTASNTSLRNRNVEC
LATAAFVAAAERRWFEYEAWMRKNGEKTTSGLVSIPMNGGELEPMLEGKS
SRGEEKQHNGKMDYEALHEGASDIIMLDESITAEKVSMALALDKDDAFDK
NVSQKAACASAVDQVAQERHVAMKEEPVESAPVEGALGKTREDSKAADPW
PIPPRHLSLEEISSAANLDVNEVTRYLKVVRIALRKQRPESSSSVTGHMP
LFCRRLDLPAKTEKLAIGIAENAMRNNICSRRNPVSISAAAIYLACQMEG
VRKTQTEICRATNLTEVTLRKVHKELNREHSAIIPAWYKAEQSTGDKKSL
SDRSSGQHHQEETVANHENEAVTASKSSVRTTDEHLLVPSVEDRREQNLP
VPPPLPPGFGEQSSKSSYGKDPGPPPPPALPPRKEQISSPVPAVNSANPL
MAMMSNPAMQAFANAFSMMPQLMMPPPPPPLPPPQSVQAKISQNSHTEKS
PSGGKGKPSSPVVKSRESSSNAAEKMKDKLNSTNTSNDGPPGMPISEGVG
KQSTVGKPTMNASAPNSASTHPQDPQNVMAGMQSMLGMMQAMQAFQVMQQ
DQSGQRGREGRPSSTNPWAAMTSLMQLQNPEVGRVMRPVTQEATAGSQST
APDPAVKERKASISGEPQKCASSKAKPESKPDES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013763Cyclin-like
IPR013150TFIIB_cyclin
IPR036915Cyclin-like_sf