Ggra4956.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4956.t1
Unique NameGgra4956.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length359
Homology
BLAST of Ggra4956.t1 vs. uniprot
Match: A0A2V3IUP2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUP2_9FLOR)

HSP 1 Score: 521 bits (1341), Expect = 1.150e-181
Identity = 247/346 (71.39%), Postives = 291/346 (84.10%), Query Frame = 0
Query:    1 MKTAVQTHHACPPERRPLPYIVVIANADRSMVIVQHKSDGKLCFPRLECPEIPHIGKQMCDCISQRFEKMCGTRYELILLYSTINDFPNDHIRPIFSNFECLSPKSEGTGMPVAPACEQYEWIAAKEVEKLLGSVGEEGCRWIDDTKDFEAFAFMTRDYEYESDEDECGLQPWKLPGWFTSTTNIASDTLAKLGYIVQGRFEQFHITHRNGAVMRVNTNKGRVYLKASNGVEGKVTSLVAKFAPELVKAPIFVNEEKQWMLMNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALKEAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDGLANV 346
            M  AV+T+H CPP+R PLPY+VVI+NADRS  IV+H SDGKLCFPRLECPEIP   K++C+C+SQRFEKMCGTRYELILLYSTINDF NDHIRPIFSNF CLSP  + TGMPVAPA +QYEW+   EV +L+ S+GEE   WI+DTKDFE FAFM RD  Y+  E+E GLQPW++PGWFTST N A+DTLAKLGY VQG FEQF  TH N AV+R NTNKGRVYLK SN +EGKVT+L+A FAP+LV+ PIFVNEEKQWMLM+D GE V DETRD+DF RLLI+LGKLQ+QS+QHIEALK+ G++VESSQSLIR+TKA+LAD+ V++ LA YEEF   A+DGLA++
Sbjct:    1 MTIAVETNHVCPPDRTPLPYVVVISNADRSSFIVKHNSDGKLCFPRLECPEIPVYAKRVCECLSQRFEKMCGTRYELILLYSTINDFRNDHIRPIFSNFYCLSPNDKSTGMPVAPANKQYEWMGVNEVSELVDSMGEEKSCWINDTKDFETFAFMMRDEVYKKGEEEFGLQPWEIPGWFTSTANAATDTLAKLGYEVQGGFEQFQATHVNAAVLRANTNKGRVYLKVSNSIEGKVTNLIASFAPQLVRKPIFVNEEKQWMLMSDQGEHVKDETRDDDFCRLLIELGKLQVQSLQHIEALKDLGLQVESSQSLIRQTKALLADKVVQERLAIYEEFPNHAEDGLADI 346          
BLAST of Ggra4956.t1 vs. uniprot
Match: A0A2V3IWK0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK0_9FLOR)

HSP 1 Score: 507 bits (1305), Expect = 2.390e-178
Identity = 240/342 (70.18%), Postives = 286/342 (83.63%), Query Frame = 0
Query:    1 MKTAVQTHHACPPERRPLPYIVVIANADRSMVIVQHKSDGKLCFPRLECPEIPHIGKQMCDCISQRFEKMCGTRYELILLYSTINDFPNDHIRPIFSNFECLSPKSEGTGMPVAPACEQYEWIAAKEVEKLLGSVGEEGCRWIDDTKDFEAFAFMTRDYEYESDEDECGLQPWKLPGWFTSTTNIASDTLAKLGYIVQGRFEQFHITHRNGAVMRVNTNKGRVYLKASNGVEGKVTSLVAKFAPELVKAPIFVNEEKQWMLMNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALKEAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDG 342
            M  A   ++ CPP+R PLPYIV I NA+RS+VIV+H SDG+LCFPRL+CPEIP  GK++CDCIS+RFEKM GTRYELILLYSTINDF NDHIRPIFS F CLSP  + TGMPVAPA EQYEW+ A EV++LL SVG+E CRWIDDTKDFEAFAF+TRD  Y+    E G+QPW+LP WFTSTT  ASDTLAKLGY VQGRFEQFHI H   AV+R NTNKGRV+LKAS+G+EGKVTS++A  AP+LV+ PIFV+EE+QWMLM+D G+P+ DETR + FSRLL++ GKLQ+QS+QH++ LKE  +RVESSQSLIR+TKA+LAD+ V K+LAK EEF+  AKDG
Sbjct:    1 MTIADDVNYVCPPDRSPLPYIVFIVNAERSIVIVKHNSDGRLCFPRLKCPEIPSYGKRVCDCISERFEKMYGTRYELILLYSTINDFRNDHIRPIFSTFYCLSPNDKSTGMPVAPAFEQYEWMPANEVDELLDSVGDERCRWIDDTKDFEAFAFITRDNVYKRGAHESGVQPWELPAWFTSTTKAASDTLAKLGYAVQGRFEQFHINHDTAAVLRANTNKGRVHLKASDGIEGKVTSVIASLAPQLVRKPIFVDEERQWMLMSDQGKPIDDETRHQGFSRLLVEHGKLQVQSLQHVKELKELRLRVESSQSLIRQTKALLADKLVAKKLAKCEEFQNHAKDG 342          
BLAST of Ggra4956.t1 vs. uniprot
Match: A0A2V3IXP1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXP1_9FLOR)

HSP 1 Score: 504 bits (1297), Expect = 4.970e-175
Identity = 233/349 (66.76%), Postives = 288/349 (82.52%), Query Frame = 0
Query:    5 VQTHHACPPERRPLPYIVVIANADRSMVIVQHKSDGKLCFPRLECPEIPHIGKQMCDCISQRFEKMCGTRYELILLYSTINDFPNDHIRPIFSNFECLSPKSEGTGMPVAPACEQYEWIAAKEVEKLLGSVGEEGCRWIDDTKDFEAFAFMTRDYEYESDEDECGLQPWKLPGWFTSTTNIASDTLAKLGYIVQGRFEQFHITHRNGAVMRVNTNKGRVYLKASNGVEGKVTSLVAKFAPELVKAPIFVNEEKQWMLMNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALKEAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDGLANVEVPSVYL 353
            ++T H CPP+R P PYIVVIAN DRS VIV+H +DGKLCFPRLECPEIP  G+++C+CIS+RFEK+CGT+YELILLYSTIND  NDHIRPIFS F CLSP    TGMPVAPAC+QY W+  +EV++ L  VGEE  RWIDDTKDFE+F FM RD EY+  E+E G++PW++PGWFTST+N AS TLAKLGY +QG+FEQF +TH   AV+R NTNKGRVYLKASNG+EG VTSLVA FAP L + PIFV++E QWMLMND GEPV D+TR EDF RLLI++GKLQ+QS+ HIEALK+ G+RVE+S+SLIR+TK++L+D+CV ++L + EEF+   +DGL ++E+ S  L
Sbjct:    1 MRTIHICPPDRTPHPYIVVIANTDRSRVIVKHNNDGKLCFPRLECPEIPFYGQKVCECISERFEKVCGTKYELILLYSTINDHFNDHIRPIFSAFHCLSPNENETGMPVAPACKQYRWMMTREVDEQLNLVGEENSRWIDDTKDFESFFFMMRDSEYKRQENEYGVRPWEVPGWFTSTSNAASSTLAKLGYELQGKFEQFQVTHGTAAVLRANTNKGRVYLKASNGIEGNVTSLVAGFAPHLARKPIFVSDENQWMLMNDQGEPVDDDTRPEDFGRLLIEVGKLQLQSLHHIEALKDVGLRVETSESLIRQTKSLLSDKCVLEKLGRLEEFQTHERDGLPDIELHSTAL 349          
BLAST of Ggra4956.t1 vs. uniprot
Match: A0A2V3J4A5 (APH domain-containing protein n=8 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A5_9FLOR)

HSP 1 Score: 243 bits (620), Expect = 8.340e-73
Identity = 140/347 (40.35%), Postives = 201/347 (57.93%), Query Frame = 0
Query:    1 MKTAVQTHHACPPERRPLPYIVVIANADRSMVIVQHKSDGKLCFPRLECPEIPHIGKQMCDCISQRFEKMCGTRYELILLYSTINDFPNDHIRPIF-SNFECLSPKSEGTGMPVAPACEQYEWIAAKEVEKLLGSVGEEGCRWIDDTKDFEAFAFMTRDYEYESDEDECGLQPWKLPGWFTSTTNIASDTLAKLGYIVQGRFEQFHITHRNGAVMRVNTNKGRVYLKASNGVEGKVTSLVAKFAPELVKAPIFVNEEKQWMLMNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALKEAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDGLANV 346
            M   ++  H CPP+R  + YI ++ N    +VIVQ K D K  FPR+  PE+P  G+ M +C S+RFE++ GTRY+L+ LY T N+  +  +  +  + FEC++P    T   V PA E+YEW+   E  +L+     +G +WI +  DF A   + RD   E  E E  L+PW+LP WF +TT  AS  L KLGY  +  FEQ H    +  V+RV T KGRVYLKASN  EG+VT  +  FAP L + P++VN EK+WMLM D+G+ + ++    D+ +L+   GKLQ++S  HI  L  AG+     + LI +   ML DE VR  L + + F    ++G A +
Sbjct:    1 MGVLLKREHVCPPDREQVAYIGLLVNPMNFLVIVQRKGD-KYLFPRVNSPEVPFRGRLMSECFSRRFEELTGTRYDLVFLYCTRNEILSRGVAGMHRAIFECVAPIDPETDEAVKPASEEYEWMPIPEAWRLV----LDGEKWIVNG-DFMAAQDLNRDEYLEMREGE--LRPWELPSWFDTTTKEASSVLHKLGYTTKDFFEQ-HTVSCHSTVLRVETEKGRVYLKASNKNEGRVTEYIGGFAPYLARKPLYVNAEKEWMLMEDYGKALFEKFTRSDYEKLVPLHGKLQLESRDHIAELIAAGVEQVDVEGLISKFGKMLEDEEVRSGLREMKGFSNVDEEGKAEL 338          
BLAST of Ggra4956.t1 vs. uniprot
Match: A0A2V3INV6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INV6_9FLOR)

HSP 1 Score: 113 bits (282), Expect = 5.850e-24
Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 0
Query:  262 MNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALKEAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDGLANV 346
            M+D GE V DETRD+DF RLLI+LGKLQ+QS+Q IEALK+ G++VESSQSLIR+TKA+LAD+ V++ LA YEEF   A+DGLA++
Sbjct:    1 MSDQGEHVKDETRDDDFCRLLIELGKLQVQSLQQIEALKDLGLQVESSQSLIRQTKALLADKVVQERLAIYEEFPNHAEDGLADI 85          
The following BLAST results are available for this feature:
BLAST of Ggra4956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IUP21.150e-18171.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWK02.390e-17870.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXP14.970e-17566.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4A58.340e-7340.35APH domain-containing protein n=8 Tax=Gracilariops... [more]
A0A2V3INV65.850e-2467.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000014_piloncontigtig00000014_pilon:145510..146586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4956.t1Ggra4956.t1Gracilaria gracilis GNS1m malemRNAtig00000014_pilon 145510..146586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4956.t1 ID=Ggra4956.t1|Name=Ggra4956.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=359bp
MKTAVQTHHACPPERRPLPYIVVIANADRSMVIVQHKSDGKLCFPRLECP
EIPHIGKQMCDCISQRFEKMCGTRYELILLYSTINDFPNDHIRPIFSNFE
CLSPKSEGTGMPVAPACEQYEWIAAKEVEKLLGSVGEEGCRWIDDTKDFE
AFAFMTRDYEYESDEDECGLQPWKLPGWFTSTTNIASDTLAKLGYIVQGR
FEQFHITHRNGAVMRVNTNKGRVYLKASNGVEGKVTSLVAKFAPELVKAP
IFVNEEKQWMLMNDHGEPVSDETRDEDFSRLLIKLGKLQIQSMQHIEALK
EAGMRVESSQSLIRRTKAMLADECVRKELAKYEEFEVDAKDGLANVEVPS
VYLTTDLI*
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