Ggra4950.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra4950.t1
Unique Name	Ggra4950.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	615

Homology

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BLAST of Ggra4950.t1 vs. uniprot
Match: A0A2V3J0U8 (Telomere repeat-binding factor 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0U8_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 6.480e-32
Identity = 129/378 (34.13%), Postives = 183/378 (48.41%), Query Frame = 0

Query:  134 RDVYVPRPNRQSLEEVAQNHRGDVNHEEHSEVRNLPDSDLGSRGRPRMIVSESLDGDTH-LRATNSENRFTHHQTEYEQDHYLRALGNDVQFSSRQEDGET-HHRTSSSPDSQFSQDDHDIKRSGLDHSVANIHMGVGDQQPALVQTGTWERIHNEDSMHQVEMPREVLDNDEDDADDDHISH-PHTDPNGTNFYH-ANDEEDDQLTPHHPFSLVNH-----DVGHSEDGEARDNSHTLGLSEPQQ--GVDLQVRLVQEPQDC-YLPQLPRSSSTDLEQRNHGQHLSPFS--ARDEKMKSSQLGVILESQRAGHSLGQDRDRGAPSGPQRAKSEKQITNNLSRSGESLRFTDSDSADNYTRHDPDVHQLGSSARERSV 497
            RD    RP R   E +  +   + +H E+       D    +R   + I+ +S D   H LR  +S+NRF     E    H       D     + E GE   HR SS   S+F +DD +  +  L+HS  NIH+G+  QQ  LV+TG  E IHNEDSM  VE+PREVLDNDE+D  +D I   PHTDPN  N +H ++DE+DDQL P HPF LVNH     DV   +  +   N+  LGL++ QQ   + L VR++++     Y     R   +   + +H +    F   AR+E  K SQ    +E+    + + + ++R A +  Q    + Q    + RS    RF     +DN +      H  GS  R R V
Sbjct:  519 RDSNASRPLRLKPEVLPTHSGQEDSHSENPSKLRERDDVTSARIHSQNIIGQSDDNSMHHLRPIHSDNRFGQEPREELNTHIRVTAPEDRFVPDQHESGEELPHRRSSHSGSRFDRDDDEDVQDDLEHSSGNIHLGIDGQQQELVRTGEGEDIHNEDSMRHVEVPREVLDNDEEDPTEDDIDRRPHTDPNHPNLFHGSDDEDDDQLAPPHPFGLVNHEDPNDDVPRVDSQQQPVNA--LGLTDGQQENAMGLHVRIIEDTSSGDYGTDRNRDQISSTAEPDHEEDRPHFGSLARNESGKGSQCSDTVENDSHRNLVAKRKERVATNEYQHHSKDIQTGQTVVRSIGGARFGRHSQSDNCSS----AH--GSEQRSRDV 888

The following BLAST results are available for this feature:

BLAST of Ggra4950.t1 vs. uniprot

BLAST of Ggra4950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0U8	6.480e-32	34.13	Telomere repeat-binding factor 5 n=1 Tax=Gracilari...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..489
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..598
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000014_pilon	contig	tig00000014_pilon:103154..108402 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra4950.t1	Ggra4950.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000014_pilon 103154..108402 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra4950.t1 ID=Ggra4950.t1|Name=Ggra4950.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=615bp
MDRIQSQLEAVGEYLRGGAAASKRAGRRKSRRHRMIDISSNNHNLLFDAD
LREALSIARHKLQDIMNTYRIDEAREKGRFARRLDKCEDLRHKWCLNFLV
AIVFFVVDKYRKLLQPRNYRQTRKSTEPRPDSHRDVYVPRPNRQSLEEVA
QNHRGDVNHEEHSEVRNLPDSDLGSRGRPRMIVSESLDGDTHLRATNSEN
RFTHHQTEYEQDHYLRALGNDVQFSSRQEDGETHHRTSSSPDSQFSQDDH
DIKRSGLDHSVANIHMGVGDQQPALVQTGTWERIHNEDSMHQVEMPREVL
DNDEDDADDDHISHPHTDPNGTNFYHANDEEDDQLTPHHPFSLVNHDVGH
SEDGEARDNSHTLGLSEPQQGVDLQVRLVQEPQDCYLPQLPRSSSTDLEQ
RNHGQHLSPFSARDEKMKSSQLGVILESQRAGHSLGQDRDRGAPSGPQRA
KSEKQITNNLSRSGESLRFTDSDSADNYTRHDPDVHQLGSSARERSVAGE
INELPGSEMISNESEFMQKRDFKEENEEIGNDRLDGRGTRGMLVAGAYMN
RDRMRRGSPLSQPAGLRLYTSNEEDYTLNSQNRSSIDGKNVPVNPSGSVS
SREGIPLVNAGAYI*