Ggra4947.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4947.t1
Unique NameGgra4947.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length461
Homology
BLAST of Ggra4947.t1 vs. uniprot
Match: A0A2V3IV26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV26_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 5.150e-44
Identity = 119/449 (26.50%), Postives = 200/449 (44.54%), Query Frame = 0
Query:    5 RAFSVLDNDPISLQNKYIGISTNSRFVRIGERRKKRA----VLDSVLVAHQYILSMILQKGIVEQKGGFNVEITPKFDGFQVLTSAHCTTAIKELQTVGIQDCIRFIEENLDSVSVEKTRSFLRASLRNTANDSEKAFDGWKVNNDWPEKLTHYGTYIVLKLFPG-LEEVE-----------------------DDVFDNVGVYISVTDQIVRGFTKDRGEEGRYFEYVTSVDPTDRNCLRTFYMKIGFSIVLSSTGALRIGAHSSYAAQM---------------------------TCTDELFEYAAVTEFDDEDVGIEMMKKLYN-------------VGDREGPIDMKI------------------------IYKRNPVLIVNHRGVQYDEQEIEYDIEDSNGGEVFMAFPKAKDWVVDDVSYDYIRGLEVGQLKLPLNLLSLR 361
            ++F   +  P++L++ Y+G S  +R  R  +RR  R     +LDS++VA QY++  +L++ +VE   G N + TP+F    ++ S +C   ++     G+ D IR + E +D +S+E +RS L +     +    KA+DGWK N+    +   YG YIVL LFP  + ++E                       + V +  GV+++VT++IVR ++ +    G Y EYV  ++P D+ C++T+YMK+G SIV+ ST A+RIG+H++ AA+M                              D+LFEY   + F  E       K  +              VG     ++M++                        +Y+ NPVL++     +        + +D   G   M     + W+  DV Y Y   L    L+ P N   +R
Sbjct:   90 QSFLGAEQCPVALRHNYVGQSGVARLTRQAKRRVTRGERCKLLDSMMVAQQYVILKVLERALVEGVHGANTDRTPRFYNVPLVWSVYCQFCVEVPIVTGMVDFIRVLNERMDEMSIEGSRSVLCSRASTVSGSGCKAWDGWKSNSAQAGRWVEYGEYIVLTLFPSQVVDIEGNSKGSTSIKLANNAAPTTTTTGEGVMEEPGVHVTVTEEIVRCYSAEADNSGLYCEYVAPLNPLDKGCVKTYYMKVGTSIVVPSTYAIRIGSHATRAARMFGYIVRRERLNKQKKGQGVFYKRDGGVVQADQLFEYGCESNFVREGYASNSHKATFRGFFGESKADERFMVGTIPSMLNMELNTPLGRKIVEPLYNVLPAVGSMMEVYRANPVLVLESSTQRQTRGGKRGEWDDE--GVRTMGVKGEQGWLEGDVPYHYFESLRGKALRFPFNTADIR 536          
BLAST of Ggra4947.t1 vs. uniprot
Match: A0A2V3IEK9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEK9_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 2.470e-32
Identity = 71/224 (31.70%), Postives = 123/224 (54.91%), Query Frame = 0
Query:   47 LVAHQYILSMILQKGIVEQKGGFNVEITPKFDGFQVLTSAHCTTAIKELQTVGIQDCIRFIEENLDSVSVEKTRSFLRASLRNTANDSEKAFDGWKVNNDWPEKLTHYGTYIVLKLFP-----------GLEEVE-------------DDVFDNVGVYISVTDQIVRGFTKDRGEEGRYFEYVTSVDPTDRNCLRTFYMKIGFSIVLSSTGALRIGAHSSYAAQ 246
            +VA QY++  +L++ +V    G N +  P+F    +++S +C   ++     G+ D IR + E +D V++E +RS +       +    KA+DGWK N+    +   YG YIVL LFP           G   ++             + V +  GV+++VT++IVR ++ +    G YFEYV  ++P D+ C++T+YM++G SIV+ ST A+RIG+H++ A +
Sbjct:    1 MVAQQYVILKVLERALVVGVHGANTDRNPRFYNVPLVSSVYCQFCVEVPIVTGMVDFIRVLNERMDEVTIEGSRSVICLRASTVSGSGCKAWDGWKSNSAQAGRWVEYGEYIVLTLFPSQVVDSEGNSKGSTSIKLANNAAPTTTTTGEGVMEEAGVHVTVTEEIVRRYSAEAENSGLYFEYVAPLNPLDKGCVKTYYMEVGTSIVVPSTYAIRIGSHATRAVR 224          
BLAST of Ggra4947.t1 vs. uniprot
Match: A0A2V3IDH1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDH1_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 4.470e-16
Identity = 56/205 (27.32%), Postives = 101/205 (49.27%), Query Frame = 0
Query:   14 PISLQNKY---IGISTNSRFVRIGERRKKRAVLDSVLVAHQYILSMILQKGIVEQKGGFNVEITPKFDGFQVLTSAHCTTAIKELQTVGIQDCIRFIEENLDSVSVEKTRSF--LRASLRNTANDSEKAFDGWKVNNDWPEKLTHYGTYIVLKLF------------------------PGLEEVEDDVFDNVGVYISVTDQIVR 189
            P++L + Y   +G+    R  + G R ++  +LDS++VA QY++  +L   ++E   G N + TP+F    +++ A+C   ++     G+ D I+ + E +D VS++ +RS   LRAS    +    KA+DGWK N+    +   Y  +IVL LF                        P      +DV +  GV+++V ++I++
Sbjct:   37 PVALWHDYEGGLGVVRLMRQAKRGNRGERCKLLDSMMVAQQYVIVKVLDLALLEGVHGTNTDRTPRFYNVPLVSGAYCKLCVEVPILTGMVDFIQVLNEQIDGVSIDGSRSVRCLRAST--VSGSGCKAWDGWKSNSAQAGRRVKYSEHIVLTLFASQVVDSEGNYKGSTSITLANTGTPSTTTTGEDVIEEAGVHVTVMEEILQ 239          
The following BLAST results are available for this feature:
BLAST of Ggra4947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IV265.150e-4426.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEK92.470e-3231.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDH14.470e-1627.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000014_piloncontigtig00000014_pilon:58319..61287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4947.t1Ggra4947.t1Gracilaria gracilis GNS1m malemRNAtig00000014_pilon 58319..61287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4947.t1 ID=Ggra4947.t1|Name=Ggra4947.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=461bp
MEIYRAFSVLDNDPISLQNKYIGISTNSRFVRIGERRKKRAVLDSVLVAH
QYILSMILQKGIVEQKGGFNVEITPKFDGFQVLTSAHCTTAIKELQTVGI
QDCIRFIEENLDSVSVEKTRSFLRASLRNTANDSEKAFDGWKVNNDWPEK
LTHYGTYIVLKLFPGLEEVEDDVFDNVGVYISVTDQIVRGFTKDRGEEGR
YFEYVTSVDPTDRNCLRTFYMKIGFSIVLSSTGALRIGAHSSYAAQMTCT
DELFEYAAVTEFDDEDVGIEMMKKLYNVGDREGPIDMKIIYKRNPVLIVN
HRGVQYDEQEIEYDIEDSNGGEVFMAFPKAKDWVVDDVSYDYIRGLEVGQ
LKLPLNLLSLRVHIINQDQTADSQVEVVDKVGSTTVGNDSEARVQNSCNE
QIGTGAGASKEHCHSELEEEVEALEGRTTKPQSRKKEVLALVSIFMPPVK
IEEPGPSEFH*
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