Ggra4936.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4936.t1
Unique NameGgra4936.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Homology
BLAST of Ggra4936.t1 vs. uniprot
Match: R7QG97 (Chitin-binding type-4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG97_CHOCR)

HSP 1 Score: 388 bits (996), Expect = 3.020e-128
Identity = 174/278 (62.59%), Postives = 203/278 (73.02%), Query Frame = 0
Query:   40 IDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPFFKWRCGVCGDHLFGA--QEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGDDISQRCFHEGHCTKLIRARGPCDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVPRGAPLDGHGGSGAHLAPAQHERP 315
            ID  AP D++ H+P+G K+  PGSG RSV  AAG+NWTPYEPLD FF WR GVCGD   GA  QEHL+GGK+++DA RVR Y QGSV+F ESEI+THHNG++EF++C+ID CGDDIS+RCFH+GHC KL+R  G CDSG    CGPID  +P RWYLPC+T EP M+GG  +T+AY LP  LVC+HCVIQWYW A N CN  GV +YFT P AP W  C GQGGA GGW S K  CGG  FPEEYWQC+DVRIVP+  P      S AH AP     P
Sbjct:    5 IDATAPTDFQAHYPSGSKNGEPGSGTRSVMQAAGNNWTPYEPLDRFFHWRAGVCGDEK-GAEPQEHLKGGKFYFDAFRVREYVQGSVIFMESEIVTHHNGFFEFHICNIDDCGDDISERCFHDGHCQKLMRTPGSCDSGTDMRCGPIDPMHPERWYLPCVTSEPVMIGGWRKTIAYTLPADLVCDHCVIQWYWVAHNYCNLKGVEEYFTSPHAPSWGDCPGQGGARGGWVSGKPDCGGEMFPEEYWQCADVRIVPKATPQPA---SPAHHAPPTTSSP 278          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3ITL9 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITL9_9FLOR)

HSP 1 Score: 306 bits (784), Expect = 1.400e-98
Identity = 145/284 (51.06%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   17 AHGFVSDPRQRGALNIQNHITQPIDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAGHN-WTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKC-GDDISQRCFHEGHCTKLIRARGP-CDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVG-GKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGAD-FPEEYWQCSDVRIVPRGA 295
            +HG +  PRQRGAL    +I   ID +AP DY+ H+PAGDK+ VPG+G RS + AAG   WTPY P D  F+WR GVCGD + G QEHL+GGK++ +   V  Y QG  +  E  I+++HNG+ E +VCD+ KC G DIS+ CF  G CT L RA  P CDSG    CGPID   P RWYLPC           +++   + LP  L C+HCV+QWYW  AN+C+PPG+ +YFTGPD P W  C GQ G  GG+   K  CGG D FPEEY QC+D+ I+PRG+
Sbjct:   25 SHGLMVLPRQRGALRKLRYIPYDIDRRAPRDYDKHYPAGDKADVPGAGKRSQEKAAGGGGWTPYNPYDANFRWRSGVCGDKVRGRQEHLKGGKFYHNGMIVAWYLQGDTIGIEHSIVSNHNGFVEVHVCDVSKCPGGDISKECFLNGACTALRRAHNPTCDSGRSMHCGPIDRYNPTRWYLPCSQKNGMGYDIFEAKYATFRLPSHLYCQHCVLQWYWVTANSCSPPGLNNYFTGPDRPHWGKCKGQAGMRGGFGRRKRTCGGRDEFPEEYVQCADISILPRGS 308          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3IU01 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU01_9FLOR)

HSP 1 Score: 305 bits (780), Expect = 4.080e-96
Identity = 152/309 (49.19%), Postives = 186/309 (60.19%), Query Frame = 0
Query:    1 MSVIILTFCLIL---ARANAHGFVSDPRQRGALNIQNHITQPIDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAG-HNWTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKC-GDDISQRCFHEGHCTKLIRARGP-CDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVGG--KSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAP-RWKPCTGQGGAVGGWTSSKGACGGAD-FPEEYWQCSDVRIVPRGAPLDG 299
            M+V  LT CL L   A  +AHG +  PRQRGA     ++   +D  AP D+  HFPAG K   PG+G  S + AAG   W PY+P  P F WR GVCGD   G Q+HL+GGK+++D + V TY QG V+     ++ HHNG+ E +VCD+ KC G DIS+ CF  G C +L RA  P C+S     CGPID NYPGRWYLPC T    +           + LP  L CEHCV+QWYW  ANTCNPPGV DY+ GP  P  W  C GQGGA GG T +K  CGG + F EEY+QC+D+RI     P  G
Sbjct:    1 MNVAFLTLCLSLLLPALIDAHGLMDIPRQRGAFRRSKYVPTALDSNAPQDFYPHFPAGVKDDRPGAGKLSQEIAAGDRGWYPYDPYKPDFTWRAGVCGDPANGNQDHLKGGKFYYDGRIVATYRQGGVIGLGLSVVAHHNGFVEAHVCDVAKCEGGDISKDCFQNGGCVQLKRAYQPECESRQSVHCGPIDHNYPGRWYLPCSTDNTGLGWDYFPPEYATFRLPDQLHCEHCVLQWYWVGANTCNPPGVLDYYDGPYGPLNWGTCRGQGGAQGGVTRNKKPCGGTEQFAEEYYQCADIRIERFDGPRSG 309          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3IPE7 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE7_9FLOR)

HSP 1 Score: 302 bits (773), Expect = 2.300e-95
Identity = 137/289 (47.40%), Postives = 189/289 (65.40%), Query Frame = 0
Query:   10 LILARANAHGFVSDPRQRGALNIQNHITQPID--DKAPIDYECHFPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGDDISQRCFHEGHCTKLIRA-RGPCDSGNHPGCGPIDSNYPGRWYLPCITH-EPAMVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPR-WKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVPR 293
            L+ A  +AH  ++DP QRG LN  N   +  +    AP+D + HFPAGDK+  PG+  RS   A+ +NW P++PL+P F+WR GVCGD   G Q+H+RGG++++ A+  RTY+QG ++  E  ++ HHNG+++F++CD+ KCG +IS++CF + HC  L RA    CDSG    C PID N+P RWYLPC T  E +        M + LP  L C+HCV+QW+W+AANTCNPPGV  ++ GP+ PR W  C GQ GA GG T  +  C     PEEY+QC+DVRI+ R
Sbjct:   17 LLTAAVHAHAVLTDPPQRGVLNPANKFNRGSERWTNAPMDLKAHFPAGDKNDAPGAAARSQLRASANNWVPFDPLNPNFRWRAGVCGDPKRGEQQHMRGGRFYFGAQITRTYKQGELIPIEVNVVAHHNGFFQFHICDVAKCGGEISEQCFRDRHCYALKRAPNAACDSGFDKQCAPIDPNFPYRWYLPCATKPENSQERMGMDKMLWQLPDNLSCDHCVLQWFWSAANTCNPPGVIAFYDGPNRPRNWGNCFGQSGARGGVTRVQRNCSPRRNPEEYYQCADVRILSR 305          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3IFP3 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFP3_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 1.680e-93
Identity = 135/255 (52.94%), Postives = 166/255 (65.10%), Query Frame = 0
Query:   40 IDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAG-HNWTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGDDISQRCFHEGHCTKLIRARGP-CDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVP 292
            +D++AP DY  HFPAG+K++ PGS  RS   AAG   WTPY P DP+F+WR GVCGD + G Q HLRGG+Y+   + V TY QGSV+     I+THHNG+    +CD+ KC  +IS  CF +G C +L RA  P C+SG  P CGPID  +PGRWYLPC + +      +     + LP  L C+HCV+QWYW  ANTCNPPGV DYF  P+ P W  C GQG A GG   +K  CGG  FPEEY QCSD+RI P
Sbjct:    5 VDERAPKDYWLHFPAGNKASHPGSALRSQIYAAGPRGWTPYNPYDPYFRWRSGVCGDAVNGPQHHLRGGQYYHGGRIVATYSQGSVLGIGMSIVTHHNGFVVLNLCDVSKCSGEISPDCFKKGACHQLKRAYHPECESGRSPHCGPIDRRHPGRWYLPCHS-KSRWDDYRPHYATFRLPAHLTCKHCVLQWYWVTANTCNPPGVMDYFDSPNRPHWGTCWGQGSAKGGVARNKPPCGGYRFPEEYIQCSDIRIQP 258          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3II93 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II93_9FLOR)

HSP 1 Score: 293 bits (750), Expect = 1.380e-92
Identity = 134/257 (52.14%), Postives = 170/257 (66.15%), Query Frame = 0
Query:   41 DDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAG-HNWTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGDDISQRCFHEGHCTKLIRARGP-CDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRI--VPR 293
            D++AP DY  HFPAG KS   G+   S + AAG   WTPY+P    F+WR GVCGD L GAQ+HL+GG++++  + V+ Y QG+++     I+THHNG+ E ++CD  KC  DIS+ CF +G CT+L RA  P C+S   P CGPID  YPGRWYLPC + +      + +   + LPP   CEHCV+QWYW AANTCNPPGV DYF GP+ P W  C+GQGGA GG T  +  CG   FPEEY QC+D+ I  VPR
Sbjct:    6 DERAPKDYWLHFPAGSKSHSLGAALHSQRAAAGKRGWTPYDPYRADFRWRSGVCGDPLHGAQQHLKGGRFYYGGRIVQRYTQGALLGIGMSIVTHHNGFVEVHICDTAKCNGDISKSCFRKGGCTQLRRAYNPVCESAKSPHCGPIDRRYPGRWYLPCNSKQ-RWNDYRPQYATFRLPPHFYCEHCVLQWYWVAANTCNPPGVLDYFDGPNRPAWGSCSGQGGAKGGVTRIQPPCGRNRFPEEYMQCADIAIDRVPR 261          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3IS24 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS24_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 5.240e-85
Identity = 136/276 (49.28%), Postives = 170/276 (61.59%), Query Frame = 0
Query:   24 PRQRGALNIQNHITQPIDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAG-HNWTPYEPLDPFFKWRCGVCGDHLFGAQEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGD-DISQRCFHEGHCTKLIRA-RGPCDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVGGKSRTMAYV---LPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGAD-FPEEYWQCSDVRIVP 292
            PRQRGA      I   +DD AP DY   FPAG K++   +G +S + AAG   WTPY+P DP F WR GVCGD ++  Q+HL+GG+++++A  V  Y QG  V   + I  HHNG+ E ++CD  KC + DIS+ CF  G C +L RA    CDSG    CGPID NYPGRWY+PC +H+  M G       Y    LP    C+HCV+QWYW +AN CNPPGV DYF GPD P W  C GQG A+GG    K  CGG +   EEY+QC+D+ I P
Sbjct:    4 PRQRGAFLQSEFIPSTVDDDAPRDYYALFPAGVKNSSTLTGMQSQQVAAGARGWTPYDPYDPKFIWRAGVCGDAVWRTQDHLKGGEFYYNATIVSRYRQGGTVGIATVITAHHNGFMELHLCDAAKCPNGDISRSCFTSGACMQLNRAPNAECDSGKSYKCGPIDRNYPGRWYVPC-SHD-IMSGYDYYPPQYAQFQLPLDWHCKHCVLQWYWVSANDCNPPGVLDYFDGPDRPSWGTCVGQGDAIGGVARRKAPCGGPERMTEEYYQCADIAIEP 277          
BLAST of Ggra4936.t1 vs. uniprot
Match: R7Q5K0 (Chitin-binding type-4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5K0_CHOCR)

HSP 1 Score: 234 bits (598), Expect = 6.530e-69
Identity = 124/305 (40.66%), Postives = 171/305 (56.07%), Query Frame = 0
Query:    6 LTFCLILARANAHGFVSDPRQRGA----LNIQNHITQPIDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPFFK--WRCGVCGDHLFGAQEHLRGGKY--FWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGD-DISQRCFHEGHCTKLIRARGP-CDS---GNHPGCGPIDSNYPGRWYLPCITHEPA---MVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVPRG 294
            L   L ++RA AHG V +PR R A    L   N IT P D        C    G K T+       + +     W  Y+P+D F     R G+CGD + GA +H+ GG Y  + +    ++Y++G+ V F +E+ T+HNGY+EF++CD+D CG  DI ++CF +GHC +L+R + P C++     H  CGP+D  YPGRWY+PC         +VGG S TM Y LP  + C+HCV+QWYW  AN+C P G  +YF   + P    C G GGA GG+ +   AC G   PEE+W CSDV+I   G
Sbjct:   12 LLLLLFVSRAAAHGMVCEPRARAAYISDLCPPNGITPPPDVVTDFCAHCQN-GGPKDTI-------MANLPPDGWKVYDPIDDFESSATRAGLCGDPV-GADDHMMGGSYMPYKEVPMTQSYKKGAEVDFTTELDTNHNGYFEFFLCDLDACGTKDIEKKCFMDGHCHRLLRVKHPQCENPSPATHYECGPVDPTYPGRWYVPCRKGGHVGKHIVGGDSGTMRYKLPDNVECKHCVLQWYWATANSCAPRGFLEYFEAFNNPFGTECDGDGGAKGGYRAGMAACEGMSIPEEFWTCSDVQITKDG 307          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A1X6PH77 (Chitin-binding type-4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PH77_PORUM)

HSP 1 Score: 218 bits (555), Expect = 5.890e-63
Identity = 122/292 (41.78%), Postives = 157/292 (53.77%), Query Frame = 0
Query:   15 ANAHGFVSDPRQRGALNIQNHITQP-IDDKAPIDYECHFPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPFFKWRC----GVCGDHLFGAQ-EHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGD-DISQRCFH-EGHCTKLIRARGP-CDSGNHPGCGPIDSNYPGRWYLPCITHEPAMVG------GKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACG-GADFPEEYWQCSDVRI 290
            A  H  ++ PRQRG L + +    P ID  AP D+  H        +   G  +VK A G +W+PY+PLD   +       GVCGD    +   H  GG ++   K V  Y  G VV FE  + T HNG++E++VCD+D CG  D++  CF   G CT+L R   P C++G    CGPI + YP RWY+PC  + P  VG      G    M Y LP  L C  CVIQWYW  AN+CNPPG+A+Y   P A  W  C G GG+VGG       CG G  +PEE+W C+DV I
Sbjct:   23 AAGHALMTTPRQRGGLKLSSEFNFPVIDPTAPTDFCPHC-------LNAGGTGTVKAANGGDWSPYDPLDAGARAARAADHGVCGDPATQSPGAHTVGGTFYHGGKTVAAYTPGGVVDFEVGVTTSHNGFFEWWVCDLDACGAMDLTNGCFGVPGACTRLDRVAHPSCEAGTDVACGPIQAAYPSRWYMPCRGNPPPTVGNTQVLGGPDGKMRYRLPAALTCTRCVIQWYWVTANSCNPPGMAEY-NFPAA--WAGCPGDGGSVGGIARGAAPCGPGGKWPEEFWTCADVVI 304          
BLAST of Ggra4936.t1 vs. uniprot
Match: A0A2V3IPE6 (Chitin-binding type-4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE6_9FLOR)

HSP 1 Score: 218 bits (554), Expect = 8.720e-63
Identity = 125/299 (41.81%), Postives = 161/299 (53.85%), Query Frame = 0
Query:   11 ILARANAHGFVSDPRQRGALN-IQNHITQPIDDKAPIDYECH-FPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPF--FKWRCGVCGDHLFGAQEHLRGGKY--FWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCGD-DISQRCFHEGHCTKLIRARGP-CD---SGNHPGCGPIDSNYPGRWYLPCITHEPA---MVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDAPRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVPRGA 295
            +L+ ANAHG +  PRQRGA + ++     P   +  ID+  H    G  +TV     ++   A G  W  YEP+  F     R G+CGD   G  +H+ GG +  +     V  Y+QG  V F +EI T+HNGY+EF++C++D CG  DI   CF   HC KL R   P C+   S     CGPID+ YPGRWYLPC         +VGG S TM Y LP    C+HCVIQWYW  AN+C P G  DYF   + P    C   GG  G + +    CGG   PEE+W C+DV+I P GA
Sbjct:   25 LLSSANAHGMMCSPRQRGAYHSVKCQSDLPDPSQPVIDHCAHCLNGGTVATV-----KTHLPADG--WKVYEPVKDFGGTATRAGLCGDPK-GRIDHMIGGDFMPYPTVPIVAHYKQGGAVDFSAEIDTNHNGYFEFFLCNLDACGTPDIDGSCFTGNHCVKLNRVPHPSCENPSSATIHECGPIDAAYPGRWYLPCRNTGHVGVHIVGGDSGTMRYQLPDGFSCKHCVIQWYWATANSCAPRGFKDYFVNYNFPFGTTCDSDGGGRGTYRADMSECGGDSLPEEFWSCADVQITPDGA 315          
The following BLAST results are available for this feature:
BLAST of Ggra4936.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QG973.020e-12862.59Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3ITL91.400e-9851.06Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3IU014.080e-9649.19Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3IPE72.300e-9547.40Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3IFP31.680e-9352.94Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3II931.380e-9252.14Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3IS245.240e-8549.28Chitin-binding type-4 domain-containing protein n=... [more]
R7Q5K06.530e-6940.66Chitin-binding type-4 domain-containing protein n=... [more]
A0A1X6PH775.890e-6341.78Chitin-binding type-4 domain-containing protein n=... [more]
A0A2V3IPE68.720e-6341.81Chitin-binding type-4 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004302Cellulose/chitin-binding protein, N-terminalPFAMPF03067LPMO_10coord: 18..288
e-value: 2.9E-18
score: 67.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..356
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:229047..230324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4936.t1Ggra4936.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 229047..230324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4936.t1 ID=Ggra4936.t1|Name=Ggra4936.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MSVIILTFCLILARANAHGFVSDPRQRGALNIQNHITQPIDDKAPIDYEC
HFPAGDKSTVPGSGHRSVKDAAGHNWTPYEPLDPFFKWRCGVCGDHLFGA
QEHLRGGKYFWDAKRVRTYEQGSVVFFESEIITHHNGYYEFYVCDIDKCG
DDISQRCFHEGHCTKLIRARGPCDSGNHPGCGPIDSNYPGRWYLPCITHE
PAMVGGKSRTMAYVLPPWLVCEHCVIQWYWTAANTCNPPGVADYFTGPDA
PRWKPCTGQGGAVGGWTSSKGACGGADFPEEYWQCSDVRIVPRGAPLDGH
GGSGAHLAPAQHERPHHEPHHHEQHHEPHHGSQANNGAPPHHVSPPPAPA
PAPASAPAPAWASLHGGSSASTGSGVFVGARSKQDGDRHAPEATAAPHNW
EQSPASDDGASAADDDVDTAAALGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004302Cellulose/chitin-bd_N