Ggra4921.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4921.t1
Unique NameGgra4921.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length445
Homology
BLAST of Ggra4921.t1 vs. uniprot
Match: A0A2V3IF97 (Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF97_9FLOR)

HSP 1 Score: 303 bits (776), Expect = 1.300e-95
Identity = 213/443 (48.08%), Postives = 243/443 (54.85%), Query Frame = 0
Query:    5 ERERKAARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRRSRTRSTDTPASHPVSAYRSSSPAASVHQLLAPAPS---HMIASAPVSIAPAAPSPLRAHVTSSNSLYPYAPYSTPPHRYYSPHVFNPVAPYYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQQPVVVPPPRPSQEASVPVSQPPLXXPPNAHSPAMPVDTPSSTAPTATLPTKALTVXXXXXXXXXXXSLKRHSASPDSLIPAQGPPKRQLLVSNVHSLASSSDPPPARPKAPLLHHSSDGVSIEQDHAQQKKDADSIGKRSCSAGSSGNEADIDTCSGGSTSGEGASRRFHKGRAAVVCQDGHVPPKIHQHEGDCMVASRLLALWTAAPNESKRVEKDAQLAKSAPVQC 444
            ERERK ARKKYVLTKRR YWT +EH RFLTALALYGREWKAIERDVATKTA+QIRSHAQKYFLRLER+RSAALH+IPPPR                  +Y  SS + S   +LAPAPS   +  AS+ VSIAPA PS   A VTS + +YPY PY+ P HRYYSP   + V+PYYS                                        P V+       +A+ P S  P+    + H P +    PSS  P+  L  K                  +   SP   +  Q P +      +  +L  SS                    +E   AQ+KKDADSIGKRS SAGSSGNEADIDTCS  STSGE   R+FH  RAAVVCQDGHVPPKI QHEGDCMVASRLLALW AAP       KD Q A+  PVQC
Sbjct:    9 ERERKVARKKYVLTKRRVYWTPDEHKRFLTALALYGREWKAIERDVATKTAIQIRSHAQKYFLRLERDRSAALHAIPPPRXXXXXXXXXXXXXXXXTHSYPPSSLSPSRPHVLAPAPSPSQYNAASSTVSIAPAVPSSTPAPVTSYHPVYPYPPYTHPSHRYYSPPFMHHVSPYYSAYHPHPQPHPRSYYCTSACHVWPNSTIAPPPTHPHHLPDSPAVLY--SSDLQANAPTSARPIK---SVHPPHI---MPSSRHPSXXLXHKR---------PPSNSHNPQEGHSPLKRLHLQYPAQNSQTAPSHQTLPKSSPEXXXXXXXXXXXXXXXXXXVE---AQRKKDADSIGKRSSSAGSSGNEADIDTCSALSTSGESQCRKFHARRAAVVCQDGHVPPKIQQHEGDCMVASRLLALWIAAPTLPNPAPKDTQPAEGTPVQC 431          
BLAST of Ggra4921.t1 vs. uniprot
Match: R7QH86 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH86_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 8.480e-37
Identity = 203/545 (37.25%), Postives = 250/545 (45.87%), Query Frame = 0
Query:   13 KKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRRSRTRSTDTPA--------------SHPVS-AYRSSSPAASVHQLLAPAP-SHMIASAPVSIAPAAPSPLRAHVTSSNSLYPYAP--------------YSTPPHRYYSPHVFNPVAPYYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQQPVVVPPPR----------PSQEASVPVSQPPLXX-------------------------------------PPNAHS------------PAMPVDTPSSTAPTATLPTKALTVXXXXXXXXXXXSL-KRHSA--SPDSLIPAQGPPKRQLLVSNVHSLASSSDPPPARPKAPLLHH---------------------------SSDGVSIEQDHAQQKKDADSIGKRSCSAGS--------------SGNEADIDTCSGGSTSGEGASRRFHKGRAAVVCQDGHVPPKIHQHEGDCMVASRLLALWTAAP 424
            KKYVLTKRREYWT +EH RF+TALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLER+RSAAL  IPPPRPR+SR                      +HP++ A+      A   + L P P SH    APV IAPAAP         + S    AP                 PP  Y +PH   P    Y   X  XXXXXXXXXXXXXXXXXXXXXXXXXX      VQ P     P           P +E  VP + P                                         PP AH             P++P+    +  P +++ +K +             S+  +H+A  SP        P +++  V    S++ +      + +AP + +                           S    +IE + +  +      G  + S GS                  ADID+ SGGS +GE A+RR H+GRAA+VC+DGHVPP + QHEGDCMVASRLLALW AAP
Sbjct:  127 KKYVLTKRREYWTDDEHKRFITALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAALLHIPPPRPRKSRAXXXXXXXXXXXXXXXMHHRYPTHPLAFAHPYPHALAPPSRPLFPVPNSHTPHPAPVVIAPAAPHAAPHAALPAASRPQCAPPXXXXXXXXXXXXXLPYPPATYQAPH--QPAQSSYYAPXTHXXXXXXXXXXXXXXXXXXXXXXXXXXPNFYSHVQVPPSTHLPHVRQPQGRVVMPRREQPVPGTSPVQSGDMSSTIPSNSLPSPGGSGTSTDGDKPRLGYGNSSGDKPPKAHLTRTRAHIGIPLLPSLPLG--FAKKPVSSVDSKDVDHPKSRKRTASGASIGNQHTADASPSKRRELIEPSEQKHRVQAQPSISMAVQSHTDKAEAPSIKNKPQPKEETRKPNVEPANGRDFQSLPIDSPQAAAIEMEMSLPEPPERRDGGDTGSGGSFEKPRSSXXXXXXXXXXXADIDS-SGGSGTGETAARRLHRGRAAIVCKDGHVPPAVDQHEGDCMVASRLLALWNAAP 666          
BLAST of Ggra4921.t1 vs. uniprot
Match: A0A7S1EQ36 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ36_9RHOD)

HSP 1 Score: 105 bits (262), Expect = 7.770e-23
Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   12 RKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHS---IPPPRPRR 87
            RKKYVLTKRREYWT  EH+RF++AL  YGR+WK IE  V TK+AVQIRSHAQKYF+RLERN  +A      +PPPRPR+
Sbjct:   26 RKKYVLTKRREYWTDGEHSRFVSALMEYGRDWKQIELAVGTKSAVQIRSHAQKYFIRLERNEVSAKDENIVVPPPRPRK 104          
BLAST of Ggra4921.t1 vs. uniprot
Match: A0A7S0G3T7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3T7_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 1.160e-22
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 0
Query:   12 RKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSI 80
            RKKYVLTKRREYWT EEH+RF+ ALA++GREWK IE+ V TKTAVQIRSHAQKYFLR+ER + +   +I
Sbjct:   28 RKKYVLTKRREYWTEEEHSRFVKALAMHGREWKLIEQKVGTKTAVQIRSHAQKYFLRMERMKKSGTPTI 96          
BLAST of Ggra4921.t1 vs. uniprot
Match: A8HVC6 (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HVC6_CHLRE)

HSP 1 Score: 99.0 bits (245), Expect = 8.070e-22
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0
Query:   11 ARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRRSRTR 91
            ARK Y++TK+RE WT EEH RFL AL LYGR W+ IE  V+TKTAVQIRSHAQK+  +LERN+ +    IPPPRP+R  +R
Sbjct:    2 ARKPYIITKQRERWTDEEHARFLEALKLYGRAWRKIEEHVSTKTAVQIRSHAQKFINKLERNKDSG---IPPPRPKRKPSR 79          
BLAST of Ggra4921.t1 vs. uniprot
Match: transcription factor MYB1R1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCF45 (transcription factor MYB1R1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCF45)

HSP 1 Score: 105 bits (263), Expect = 1.870e-21
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0
Query:   11 ARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAA 76
            ARKKYVLTKRR+YWT EEH RF+TALA++GR+WKAIE  V +KTAVQIRSHAQKYFLRL+R  +AA
Sbjct:  131 ARKKYVLTKRRQYWTPEEHERFVTALAVHGRQWKAIEASVGSKTAVQIRSHAQKYFLRLDRANTAA 196          
BLAST of Ggra4921.t1 vs. uniprot
Match: M2VWL0 (Circadian clock associated 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWL0_GALSU)

HSP 1 Score: 102 bits (254), Expect = 5.970e-20
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    5 ERERKAARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRS 74
            ER  K+ RKKYVLTK+REYWT EEHNRFL  L  YGR WKAIE+ V TKTAVQ+RSHAQKYF+RL +N++
Sbjct:    3 ERIDKSRRKKYVLTKKREYWTDEEHNRFLVGLEQYGRNWKAIEKVVQTKTAVQVRSHAQKYFIRLAKNKT 72          
BLAST of Ggra4921.t1 vs. uniprot
Match: A0A2I0BGM4 (Transcription factor ASG4 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BGM4_9ASPA)

HSP 1 Score: 95.5 bits (236), Expect = 1.200e-19
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    9 KAARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRRSRTRS 92
            K  RK Y +TK R+ W+ EEH RFL AL L+GREWK IE  V TKT +QIRSHAQKYFL++++N   A   +PPPRP+R+ T S
Sbjct:   11 KKLRKPYTITKSRDRWSDEEHERFLDALLLFGREWKKIEDFVGTKTVIQIRSHAQKYFLKVQKNGMMA--HVPPPRPKRNATHS 92          
BLAST of Ggra4921.t1 vs. uniprot
Match: A0A2V3ILX9 (Myb-like protein G n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX9_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 3.130e-19
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    9 KAARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLER 71
            K  RKKYVLTKRR+YWT EEH RF+ AL  YGREWKAIER V +KTAVQIRSHAQKYFLRL+R
Sbjct:   33 KPPRKKYVLTKRRQYWTDEEHARFVDALCKYGREWKAIERLVGSKTAVQIRSHAQKYFLRLQR 95          
BLAST of Ggra4921.t1 vs. uniprot
Match: A8JHC0 (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JHC0_CHLRE)

HSP 1 Score: 92.0 bits (227), Expect = 3.920e-19
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   12 RKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRR 87
            RK+Y ++KRRE WT +EH RF+ AL LYGR W+ IE  V TKTAVQIRSHAQKYF +LE+        +PPPRP+R
Sbjct:   23 RKQYTVSKRRERWTDDEHQRFVEALKLYGRAWRKIEEYVGTKTAVQIRSHAQKYFNKLEKGERPT--GVPPPRPKR 96          
The following BLAST results are available for this feature:
BLAST of Ggra4921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF971.300e-9548.08Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda T... [more]
R7QH868.480e-3737.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1EQ367.770e-2368.35Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0G3T71.160e-2272.46Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A8HVC68.070e-2262.96Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
transcription factor MYB1R1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCF451.870e-2177.27transcription factor MYB1R1-like n=1 Tax=Mercenari... [more]
M2VWL05.970e-2071.43Circadian clock associated 1 n=1 Tax=Galdieria sul... [more]
A0A2I0BGM41.200e-1958.33Transcription factor ASG4 n=1 Tax=Apostasia shenzh... [more]
A0A2V3ILX93.130e-1979.37Myb-like protein G n=1 Tax=Gracilariopsis chorda T... [more]
A8JHC03.920e-1960.53Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 20..68
e-value: 4.2E-11
score: 52.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 20..66
score: 6.44629
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 24..66
e-value: 5.91761E-9
score: 49.4962
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 21..65
e-value: 2.7E-11
score: 43.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 18..70
score: 17.728954
NoneNo IPR availableGENE3D1.10.10.60coord: 24..69
e-value: 3.4E-15
score: 57.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..100
NoneNo IPR availablePANTHERPTHR12802:SF20MYB-LIKE PROTEIN Gcoord: 10..129
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 10..129
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 19..68
e-value: 5.3E-15
score: 53.5
IPR017884SANT domainPROSITEPS51293SANTcoord: 24..70
score: 9.110035
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 16..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:121409..122743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4921.t1Ggra4921.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 121409..122743 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4921.t1 ID=Ggra4921.t1|Name=Ggra4921.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=445bp
MGERERERKAARKKYVLTKRREYWTAEEHNRFLTALALYGREWKAIERDV
ATKTAVQIRSHAQKYFLRLERNRSAALHSIPPPRPRRSRTRSTDTPASHP
VSAYRSSSPAASVHQLLAPAPSHMIASAPVSIAPAAPSPLRAHVTSSNSL
YPYAPYSTPPHRYYSPHVFNPVAPYYSPYHPTPHPHHHPHHPPHHHHHHH
HHHPHPYYCPPMCTVQQPVVVPPPRPSQEASVPVSQPPLPPPPNAHSPAM
PVDTPSSTAPTATLPTKALTVQPPAPAPPQPQSLKRHSASPDSLIPAQGP
PKRQLLVSNVHSLASSSDPPPARPKAPLLHHSSDGVSIEQDHAQQKKDAD
SIGKRSCSAGSSGNEADIDTCSGGSTSGEGASRRFHKGRAAVVCQDGHVP
PKIHQHEGDCMVASRLLALWTAAPNESKRVEKDAQLAKSAPVQC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR017884SANT_dom
IPR009057Homeobox-like_sf