Ggra4915.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4915.t1
Unique NameGgra4915.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length497
Homology
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A2V3IHZ0 (Protein IWS1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHZ0_9FLOR)

HSP 1 Score: 447 bits (1149), Expect = 5.220e-150
Identity = 227/294 (77.21%), Postives = 266/294 (90.48%), Query Frame = 0
Query:  203 PKTEFERVLDDAKAMRRPRAKEMDDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGVAAERRHALDQLRSFKSKRQKLESIKPYPGKERSQVLAAIPRPSPMLYTTLAESETVVSQKSIRGGRNAKGAPRKVSKTISDLRRNNKRGSARASRPSINGRDR 496
            PK  F   +D  KA RRPRA+E+D+N + TQ +DFLE+MMKARDDD+ AY++G+PALNKLKM+R VELMIMKTSHR +LLD+MLL+V+KAWLDPMPDGTLPNL IRQ+LLQILSDMPVDN+WIERLESSQGLGK+IH+LATKDT+  NRRVAEKLMMKWSR+VYQ NANFHDLLEEYARPDNGNRIP EGVAAERRHA++QLR+FKS RQKLES+KP  G++R QVLAA+PRP+PMLYTTLAES+ VV+ +S+RGG+++K + RKVSKTIS+LRR NKRGSARASRPSINGRDR
Sbjct:  213 PKDAFTEAMDHVKARRRPRAREVDENAIETQCIDFLERMMKARDDDITAYKNGRPALNKLKMVRDVELMIMKTSHRLLLLDNMLLSVVKAWLDPMPDGTLPNLQIRQTLLQILSDMPVDNEWIERLESSQGLGKVIHFLATKDTHPPNRRVAEKLMMKWSRLVYQNNANFHDLLEEYARPDNGNRIPKEGVAAERRHAMNQLRTFKSTRQKLESVKPIDGRQREQVLAAVPRPAPMLYTTLAESD-VVNHRSMRGGKSSKSSTRKVSKTISELRRFNKRGSARASRPSINGRDR 505          
BLAST of Ggra4915.t1 vs. uniprot
Match: R7QJS3 (TFIIS N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJS3_CHOCR)

HSP 1 Score: 327 bits (837), Expect = 2.360e-103
Identity = 165/288 (57.29%), Postives = 225/288 (78.12%), Query Frame = 0
Query:  207 FERVLDDAKAMRRPRAKEMDDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGVAAERRHALDQLRSFKSKRQKLESIKPYPGKERSQVLAAIPRPSPMLYTTLAESETVVSQKSIRGGRNAKGAPRKVSKTISDLRRNNKRGSARASRPSINGR 494
             ER ++D KA+RRPR KE+D   + ++ + FLE MM ARD D++AYRSGKPALNKLKMLR VELM MK SHRE+LLD+MLL ++KAWLDPMPDG LPN+ IR ++LQIL D+PVD+DW+ERL SSQGLGKLIH+L+ KD   +NRR+A+KLM +W+R VYQ+N N+HDLL+E+ RP+ G R P + VAAER+ A++ ++ F++ ++KL++ K    +++  VLA IPR +P L+T LAES   + +K++R  RNAK   +KV++T+S LRR NK  SARA++PS+NGR
Sbjct:  197 IERAIEDNKALRRPRRKELDPKKIESECIAFLESMMGARDADIKAYRSGKPALNKLKMLRDVELMAMKVSHREILLDNMLLAIVKAWLDPMPDGALPNVEIRSTMLQILLDIPVDSDWVERLHSSQGLGKLIHFLSMKDDIPSNRRLADKLMKRWARPVYQSNNNYHDLLDEFDRPEEGRRAPKDSVAAERKAAMETVKHFQTAQEKLQAFKHKTNEDK--VLATIPRRTPFLFTALAESSASIDEKTLREMRNAKSRNKKVNRTMSTLRRANKNKSARAAKPSVNGR 482          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A6T6C574 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C574_9RHOD)

HSP 1 Score: 158 bits (399), Expect = 7.140e-41
Identity = 80/164 (48.78%), Postives = 117/164 (71.34%), Query Frame = 0
Query:  207 FERVLDDAKAMRRPRAKEMDDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQTNA 370
            F+R ++++K  R+ R +  D  VV  + LDF+  MM+ RDDD++AYR   PALNK+K L  VE M+ K  +RE LL + LL VI++WLDPMPD TLPNLT+R  LL++LS+ PV+ +W+  LE S+GLGK+++YL+ KD +  N R+A+ L+ KWSR +++  A
Sbjct:   35 FDRKMEESKNRRKXR-RPKDRAVVEEEVLDFIAFMMRVRDDDLKAYRKNTPALNKVKSLPHVEEMLKKIDYRETLLQNDLLPVIRSWLDPMPDNTLPNLTVRSRLLELLSEFPVNEEWLHHLERSRGLGKVVNYLSMKDPHEPNSRLAKALVEKWSRPIFEQTA 197          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A7S1ERP1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERP1_9RHOD)

HSP 1 Score: 155 bits (393), Expect = 2.590e-38
Identity = 79/159 (49.69%), Postives = 113/159 (71.07%), Query Frame = 0
Query:  221 RAKEMDDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQ-TNANFHDLLEE 378
            R +E+DD VV  +++DF+ KMM ARD D+ AY+ GKPALNKL++L  +E M+ K  +R+ LL + +LNVIKAW+DP+PDG LPN T+R  +L +L   PVD DW + L  S GLGK+++Y A KD  A N R+A KL+ KWSR +++ +N N+ +  E+
Sbjct:  217 RRREVDDAVVDKETVDFVAKMMTARDQDLIAYKKGKPALNKLRLLTELESMVKKVPYRKALLINGVLNVIKAWMDPLPDGQLPNQTLRVRMLGVLEVFPVDGDWPKHLSDSDGLGKVVNYYALKDPFAPNGRLARKLVEKWSRQLFEPSNKNYSEAEED 375          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A1X6P543 (TFIIS N-terminal domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P543_PORUM)

HSP 1 Score: 150 bits (378), Expect = 2.660e-36
Identity = 76/157 (48.41%), Postives = 106/157 (67.52%), Query Frame = 0
Query:  225 MDDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYAR 381
            +D++     ++ FL  MM ARD+D +A++ GKPAL+KL  L  VE M+ K  +R  LL++ LL+V+KAWLDPMPDG+LPNL +RQ LL  L   PVD+ W + L +S GLGK+IH+LA  D   AN+R+A KLM KWSR ++    ++  L  +Y R
Sbjct:  180 LDEDAAAESAVKFLVTMMDARDEDAKAFKRGKPALSKLCYLPNVERMLCKVDYRAPLLNNGLLSVMKAWLDPMPDGSLPNLRVRQVLLAALDAFPVDDGWTDLLRASNGLGKIIHFLARHDDFEANKRLARKLMDKWSRPIFDMTTDYSHLNADYER 336          
BLAST of Ggra4915.t1 vs. uniprot
Match: M2VTC6 (TFIIS N-terminal domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTC6_GALSU)

HSP 1 Score: 140 bits (353), Expect = 2.600e-33
Identity = 86/248 (34.68%), Postives = 137/248 (55.24%), Query Frame = 0
Query:  232 TQSLD-FLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGV-----AAERRHALDQLRSFKSKRQKLESIKPYPGKERSQVLAAIPRPSPMLYTTLAESETVVSQKSIRGGRNAKGAPRKVSKTIS 473
            T+ +D FL +MMKA DDD+ A ++GKPA NKLK++  VE  + +  +RE+ L+  LL+V+K WLDP+PDG+LPN ++R  LL++L + PVDN W+E L SS  +G+ + Y++  D   + RR+A+ L+ KW R V+    ++ D   ++       R+P E +     +A   H  D +    SKR K+ + +           AAIP+P    +  + +S  +      R G     A RK+ +  S
Sbjct:  166 TEEVDNFLRRMMKAADDDLLALKAGKPATNKLKLVEEVEKNLRRVEYRELFLEQGLLSVVKRWLDPLPDGSLPNASLRSRLLKMLDEFPVDNSWMELLRSSD-IGRAVKYISVNDRMESTRRLAKDLVEKWIRPVFNAKTDYRDFQTQF------RRVPVEEIGELQSSASSAHNEDNI----SKRLKIPTYR-----------AAIPQPVSFNFQAMPDSSHIAEALEERKGIVQPAALRKIERRSS 391          
BLAST of Ggra4915.t1 vs. uniprot
Match: A4RSG5 (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RSG5_OSTLU)

HSP 1 Score: 125 bits (314), Expect = 4.490e-29
Identity = 73/179 (40.78%), Postives = 107/179 (59.78%), Query Frame = 0
Query:  227 DNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQ--GLGKLIHYLAT-KDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGVAAERRHALD 402
            D   R + LDFL KM  A ++D RAY +GKPA+ KLK+L  VE  +      E  L H LL+V++AWLD +PDG LPNLTIR SL++++  +PV  D  ER +  +  GLG+ I +L+T ++    NR V +KL+ KWSR VY+ ++++ D+       D   R P +   +   H+ D
Sbjct:   24 DETARMEVLDFLSKMEIAVEEDARAYAAGKPAVKKLKLLPEVERKLKMVELHEAFLRHGLLSVLRAWLDLLPDGNLPNLTIRTSLIKLIEQLPVSTDSHERKDELKRSGLGRNILFLSTLEEETPKNRTVCKKLVEKWSRPVYELSSHYGDIHVGRETVDTDERRPKKSKTSAVDHSAD 202          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A7R9XNY3 (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XNY3_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 7.750e-28
Identity = 92/271 (33.95%), Postives = 141/271 (52.03%), Query Frame = 0
Query:  227 DNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQ--GLGKLIHYLAT-KDTNAANRRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGVAAERRHALDQLRSFKSKRQKLESIKPYPGKERSQVLAAIPRPSPMLYTTLAESETVVSQKSIRGGRNAKGAPRKVSKTISDLRRNNKRGSARASRPSINGR 494
            D   R + LDFL KM  A ++D RAY +GKPA+ KLK+L  VE  +      E  L H LL+V++AWLD +PDG LPNLTIR SL++++  +PV  D  ER +  +  GLG+ I +L+T ++    NR V +KL+ KWSR VY+ ++++ D+       D   R P +   +   H+ D   +  +      S +P  G+   +  A +P  S   Y      E   S+   R         R+V + +  + +N  +G  +A  PS+ GR
Sbjct:  182 DETARMEVLDFLSKMEIAVEEDARAYAAGKPAVKKLKLLPEVERKLKMVELHEAFLRHGLLSVLRAWLDLLPDGNLPNLTIRTSLIKLIEQLPVSTDSHERKDELKRSGLGRNILFLSTLEEETPKNRTVCKKLVEKWSRPVYELSSHYGDIHVGRETVDTDERRPKKSKTSAVDHSADVGTNADA-----ASDEPKYGERGYRHHAMVPERSSTQYVKQPRLEIDPSEIKAR---TQTADQRRVRQLVGKVAKNKSKGG-QAYTPSVEGR 443          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A096PAF2 (Transcription factor IIS, N-terminal n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAF2_OSTTA)

HSP 1 Score: 124 bits (311), Expect = 1.770e-27
Identity = 73/174 (41.95%), Postives = 106/174 (60.92%), Query Frame = 0
Query:  226 DDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQ--GLGKLIHYLAT-KDTNAANRRVAEKLMMKWSRVVYQTNANFHDL-LEEYARPDNGNRIPSEGVAA 395
            D+ V R + LDFL KM  A ++D RAY  GKPA+ KLK+L  VE  +      E  L H LLNV+ AWL+ +PDG LPNLTIR SL++++  +PV  D  +R E  +  GLG++I +L+T  +    NR   +KL+ KWSR VY+ ++++ D+ +      D G+R P    A+
Sbjct:  150 DEEVARMEVLDFLSKMEIAVEEDARAYAGGKPAVKKLKLLPEVENKLRHVELHEAFLRHGLLNVLHAWLNLLPDGNLPNLTIRTSLIKLIEQLPVSTDQHDRKEELKRSGLGRIILFLSTLPEETPKNRATCKKLVEKWSRPVYELSSHYGDIHVGREVANDAGDRKPKRPKAS 323          
BLAST of Ggra4915.t1 vs. uniprot
Match: A0A1Y5HX44 (TFIIS N-terminal domain-containing protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5HX44_OSTTA)

HSP 1 Score: 124 bits (311), Expect = 1.290e-26
Identity = 73/174 (41.95%), Postives = 106/174 (60.92%), Query Frame = 0
Query:  226 DDNVVRTQSLDFLEKMMKARDDDMRAYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDGTLPNLTIRQSLLQILSDMPVDNDWIERLESSQ--GLGKLIHYLAT-KDTNAANRRVAEKLMMKWSRVVYQTNANFHDL-LEEYARPDNGNRIPSEGVAA 395
            D+ V R + LDFL KM  A ++D RAY  GKPA+ KLK+L  VE  +      E  L H LLNV+ AWL+ +PDG LPNLTIR SL++++  +PV  D  +R E  +  GLG++I +L+T  +    NR   +KL+ KWSR VY+ ++++ D+ +      D G+R P    A+
Sbjct:   68 DEEVARMEVLDFLSKMEIAVEEDARAYAGGKPAVKKLKLLPEVENKLRHVELHEAFLRHGLLNVLHAWLNLLPDGNLPNLTIRTSLIKLIEQLPVSTDQHDRKEELKRSGLGRIILFLSTLPEETPKNRATCKKLVEKWSRPVYELSSHYGDIHVGREVANDAGDRKPKRPKAS 241          
The following BLAST results are available for this feature:
BLAST of Ggra4915.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHZ05.220e-15077.21Protein IWS1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QJS32.360e-10357.29TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A6T6C5747.140e-4148.78Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1ERP12.590e-3849.69Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6P5432.660e-3648.41TFIIS N-terminal domain-containing protein n=1 Tax... [more]
M2VTC62.600e-3334.68TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A4RSG54.490e-2940.78TFIIS N-terminal domain-containing protein (Fragme... [more]
A0A7R9XNY37.750e-2833.95Hypothetical protein n=1 Tax=Ostreococcus sp. 'luc... [more]
A0A096PAF21.770e-2741.95Transcription factor IIS, N-terminal n=1 Tax=Ostre... [more]
A0A1Y5HX441.290e-2641.95TFIIS N-terminal domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..215
NoneNo IPR availablePANTHERPTHR46010PROTEIN IWS1 HOMOLOGcoord: 31..495
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 314..365
e-value: 2.8E-4
score: 20.9
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 288..368
score: 14.942076
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 225..372
e-value: 2.7E-37
score: 129.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:76057..77547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4915.t1Ggra4915.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 76057..77547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4915.t1 ID=Ggra4915.t1|Name=Ggra4915.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=497bp
MSNVIEDVFGSDWGSDIELRNEISDAIKNTDEKEGEPSGKPSSSTTPSQR
EKASSALDDSHSPPPDRKPSKHSSPHNSDSERRPTSKRASSPSRGRRSSA
RRSDDEYASGVQSGGAASSEDERQAERRRRREKKRRLMRDSSKKNKRIKR
ERRSSPELEGDSEENEQVEPRRRRRSSAAKPVEEEPAEEPEPEPEPEPKQ
EKPKTEFERVLDDAKAMRRPRAKEMDDNVVRTQSLDFLEKMMKARDDDMR
AYRSGKPALNKLKMLRTVELMIMKTSHREMLLDHMLLNVIKAWLDPMPDG
TLPNLTIRQSLLQILSDMPVDNDWIERLESSQGLGKLIHYLATKDTNAAN
RRVAEKLMMKWSRVVYQTNANFHDLLEEYARPDNGNRIPSEGVAAERRHA
LDQLRSFKSKRQKLESIKPYPGKERSQVLAAIPRPSPMLYTTLAESETVV
SQKSIRGGRNAKGAPRKVSKTISDLRRNNKRGSARASRPSINGRDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017923TFIIS_N
IPR035441TFIIS/LEDGF_dom_sf