Ggra4904.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra4904.t1
Unique Name	Ggra4904.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	513

Homology

[Close]

BLAST of Ggra4904.t1 vs. uniprot
Match: R7Q805 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q805_CHOCR)

HSP 1 Score: 277 bits (708), Expect = 3.400e-85
Identity = 154/368 (41.85%), Postives = 207/368 (56.25%), Query Frame = 0

Query:    6 LTAHEQSALRAARTFHAAEVPQRHLRELPPPAPPTRHRHSEGVHVVGGNRQHFGKYATEGLWSKEEALVTREALLSWKTRFRLNSIASNTLVSDGLTRFLPVGADPDYQ--LLTQILTSSPHAKVSDCDLRDHMLQHSVIFALSYRHQGPKGANITKQLWKRITEACNALSYAGGFSHYSLWVDSVSAATGQRKKESGLQKASNNEYIDWFTIGVAPYLLLPTVLMAGQTDISERMWLRMEEKLSVYGFCSVYVLTDHHKVVRLEPGRCNNLDTSIILRCFSQSVIRGEYNGLLTSFKKDYVNLLGWAVQFQDGSADTRGLGSVFSICAASDIGGEFPMELNSYIIRHAMEELSWLHELEKWSGVVEY 371
            L+  E+ AL  AR +H   V Q  LR+L P  P     H  GVHV   +RQ F  Y T  LWS EEAL +R AL  W     L  +A+NT+V+ GLTR +     P     LL +IL+    A+++  +L+    +   +F+LSYRH+GPKG NI+ +LW  +    +A++ + GF  YSLW+D VSAA  QR   +        +YIDWF++GVAPYLLLP +L+A   D   R WLRMEEKLS YG   VY L     +VRLEPG          + C  QSV+RGEYNGL  S+++DY+NLL WA +F     + RGL  VF     +      P+E  SY++   +  + WLH  E ++G VEY
Sbjct:    9 LSTEEKQALSQARAYHLRTV-QSQLRQLSPVPPFPGPPHRPGVHVTTSHRQGFTHYCTARLWSNEEALYSRAALQRWCGDLHLPHLATNTVVAQGLTRPMATAVPPATAGGLLPRILSGDAGARITAAELKRVEREAIGVFSLSYRHEGPKGRNISARLWTDVVTVASAVAASAGFRAYSLWIDCVSAAAAQRDVPAA-------DYIDWFSVGVAPYLLLPALLVATGRDYRSRTWLRMEEKLSQYGVFCVYALRSAGAIVRLEPGPTELRGPYERIWCLCQSVVRGEYNGLAASYREDYLNLLEWATEFDQRPLNFRGLQRVFGELGPTAFRDTLPIETGSYVVLPLLPRMPWLHGAEAFAGRVEY 368

The following BLAST results are available for this feature:

BLAST of Ggra4904.t1 vs. uniprot

BLAST of Ggra4904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q805	3.400e-85	41.85	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..41

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000856_pilon	contig	tig00000856_pilon:392966..394504 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra4904.t1	Ggra4904.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000856_pilon 392966..394504 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra4904.t1 ID=Ggra4904.t1|Name=Ggra4904.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=513bp
MMAKSLTAHEQSALRAARTFHAAEVPQRHLRELPPPAPPTRHRHSEGVHV
VGGNRQHFGKYATEGLWSKEEALVTREALLSWKTRFRLNSIASNTLVSDG
LTRFLPVGADPDYQLLTQILTSSPHAKVSDCDLRDHMLQHSVIFALSYRH
QGPKGANITKQLWKRITEACNALSYAGGFSHYSLWVDSVSAATGQRKKES
GLQKASNNEYIDWFTIGVAPYLLLPTVLMAGQTDISERMWLRMEEKLSVY
GFCSVYVLTDHHKVVRLEPGRCNNLDTSIILRCFSQSVIRGEYNGLLTSF
KKDYVNLLGWAVQFQDGSADTRGLGSVFSICAASDIGGEFPMELNSYIIR
HAMEELSWLHELEKWSGVVEYYHQIGDMQTLLLEAQKSAIGSADGQVGLL
RMENGTLWCLQQFYSPDAIAFLQRKRLRSQADSTAVLIELHERFDSKGAL
YMRKRSVLFGVPFSNISYNTWDFERPHGLEAIPEYVRTLFNLDSTSVMNT
EWISQSEFCTRF*