Ggra4893.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4893.t1
Unique NameGgra4893.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
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BLAST of Ggra4893.t1 vs. uniprot
Match: A0LNV8 (Ankyrin n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) TaxID=335543 RepID=A0LNV8_SYNFM)

HSP 1 Score: 62.0 bits (149), Expect = 8.550e-8
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:    5 DLHKAAKRGDLRQVKRL-AHDLEVDSPGKDGHTALMYAARNGHSTVVEALVAEGVDINA 62
            DL KAA RGDL +V+RL A   E+ +  KDG TAL++AA  GH  VV AL+A+G D+NA
Sbjct:   41 DLIKAAGRGDLPEVERLLAAGAEISAGDKDGRTALVWAAMQGHRDVVRALLAKGADVNA 99
The following BLAST results are available for this feature:
BLAST of Ggra4893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0LNV88.550e-855.93Ankyrin n=1 Tax=Syntrophobacter fumaroxidans (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 82..96
score: 38.63
coord: 34..49
score: 40.99
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 66..95
e-value: 0.027
score: 23.6
coord: 98..127
e-value: 35.0
score: 13.3
coord: 131..160
e-value: 400.0
score: 8.0
coord: 33..62
e-value: 2.4E-6
score: 37.1
IPR002110Ankyrin repeatPFAMPF13857Ank_5coord: 21..74
e-value: 3.1E-11
score: 43.3
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 102..141
e-value: 3.1E-8
score: 34.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 33..65
score: 13.99821
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 66..98
score: 10.52591
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..130
score: 10.68617
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 99..182
e-value: 3.7E-17
score: 64.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..98
e-value: 1.2E-26
score: 94.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..171
NoneNo IPR availablePANTHERPTHR24161FAMILY NOT NAMEDcoord: 36..144
NoneNo IPR availablePANTHERPTHR24161:SF85LD20463Pcoord: 36..144
NoneNo IPR availablePANTHERPTHR24161:SF85LD20463Pcoord: 6..95
NoneNo IPR availablePANTHERPTHR24161FAMILY NOT NAMEDcoord: 6..95
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 103..130
score: 9.33032
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 33..65
score: 12.620211
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 66..94
score: 9.701759

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000856_piloncontigtig00000856_pilon:287263..287919 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4893.t1Ggra4893.t1Gracilaria gracilis GNS1m malemRNAtig00000856_pilon 287263..287919 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4893.t1 ID=Ggra4893.t1|Name=Ggra4893.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MPGGDLHKAAKRGDLRQVKRLAHDLEVDSPGKDGHTALMYAARNGHSTVV
EALVAEGVDINATDDFGVTPLLYATRERRAHVVQALLVRGANVNQTKAFG
AVLHVAASMGSVEIVEGMLAHGAEIDSTDDEGNTPLHKAASAIEDRAALC
LWRAGTDTFKRNHEKHTPLSLLHEHSDVPEKMWTEPSLFRFLPSPQIAEL
REKFLDLVSSSQSGEKKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf