Ggra4881.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4881.t1
Unique NameGgra4881.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length180
Homology
BLAST of Ggra4881.t1 vs. uniprot
Match: A0A2V3J4L8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L8_9FLOR)

HSP 1 Score: 216 bits (550), Expect = 5.350e-69
Identity = 110/174 (63.22%), Postives = 136/174 (78.16%), Query Frame = 0
Query:    6 FAFALSSPLLRQCPLPLGIATSKPAYLTYAKRAHVARAPSWRASGIPEPERTGSSADDERLNQELQAKVKELFGSRNNVTIDIKTDSDVQFMVQREDPALEVQQRKSAWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRYEMPMYGSHSYIDPYQLLEESQQAQDSAAQ 179
            +AFA + P+L +         S+ +  TY KR H+ RA SWRASGIPEPE TGSSADDERL+QELQAKV ELFGSRNN+TID+ TDSDVQF+VQR   + E +Q+++AW+VI SV V+SV AG+LFTA+YY+GAVHGS DS+ RYEMP YG+ SYIDPY+LLEE +Q Q+S  Q
Sbjct:    4 YAFAGAVPVLPRSNRLKSAIVSEASPFTYRKRPHIVRASSWRASGIPEPESTGSSADDERLSQELQAKVTELFGSRNNITIDMNTDSDVQFIVQRSVASTEARQKRAAWSVIISVAVISVAAGVLFTAMYYAGAVHGSEDSDGRYEMPTYGTQSYIDPYRLLEEDRQIQESKTQ 177          
BLAST of Ggra4881.t1 vs. uniprot
Match: R7Q2I8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2I8_CHOCR)

HSP 1 Score: 154 bits (390), Expect = 9.370e-45
Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 0
Query:   27 SKPAYLTYAKRAHVARAPSWRASGIPEPERTGSSADDERLNQELQAKVKELFGSRNNVTIDIKTDSDVQFMVQREDPALEVQQRKSAWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRYEMPMYGSHSYIDPYQLLEESQQAQD 175
            SK   + +A R  V+R   W AS IPEPE+ G++ADD+ LN EL+ KV ELFGSR NV+I+++ DS+VQF V++ +   E +Q K+AW+VI SV  LSV AGI F  LY +GAVHGS  +E+RY+MP +G+ SYIDPY+LLEE  Q QD
Sbjct:   23 SKTTRVYHANRVKVSR--RWHASSIPEPEQGGNTADDDALNLELRNKVNELFGSRQNVSIEMEADSNVQFRVRKREVEYEYRQTKAAWSVIGSVAALSVAAGIAFIVLYATGAVHGS-PNERRYDMPTFGTTSYIDPYELLEEESQFQD 168          
BLAST of Ggra4881.t1 vs. uniprot
Match: A0A7S3ECR1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECR1_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 2.190e-15
Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 0
Query:   58 GSSADDERLNQELQAKVKELFGSRNNVTIDIKTD---SDVQFMVQREDPALEVQQRKS---AWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRYEMPMYGSHSYIDPYQLL 167
            G+  DD++LN ELQ +VKELFGS    +++   D    +  F  Q     L    R S   A   + S+ V+SV AGILFT L+ SG +H +      Y MP YG+ SYI+P +LL
Sbjct:   30 GNDMDDQQLNAELQRRVKELFGSSRRESVNGAADRKEGEYSFEPQNSRDPLRAPSRGSRQDALFTLTSIAVMSVIAGILFTFLFESGYIHDASQDRPYYNMPTYGTTSYIEPVELL 145          
BLAST of Ggra4881.t1 vs. uniprot
Match: M1VA14 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VA14_CYAM1)

HSP 1 Score: 65.5 bits (158), Expect = 6.700e-10
Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 0
Query:    7 AFALSSPLLRQCPLPLGIATSK----PAYLTYAKRAHVARAPSWRASG-IPEPERTGSSADDE------RLNQELQAKVKELFGSRNNVT---IDIKTDSDVQFMVQREDPALEV-------QQRKSAWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRYEMPMYGSHSYIDPYQLLEES 170
            AFA +S  L Q    + ++T      P YL   ++    R    RASG  P+      S DD+       L + L+ +V++L+GS        +    DS ++  ++RE     V       Q+R  A  V+ S+  LS+ +G+LF  +Y +GAVHG   S + ++ P+YG+ SY++PY+LLE S
Sbjct:   15 AFAFASRHLLQTGHTVRVSTCAARVGPRYL--GRQRFACRLGKLRASGPFPDGPENPISPDDQPDGSDSALLESLRRRVRDLYGSEEAPVAGRVPPTKDSALEAPLRRERGGRTVRTYVRAQQERSQALFVVGSIFFLSILSGVLFVFIYGAGAVHGGGHSVQ-HKPPIYGTDSYVNPYELLESS 196          
BLAST of Ggra4881.t1 vs. uniprot
Match: A0A7S0BVD9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BVD9_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 6.670e-9
Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 0
Query:   73 KVKELFGSRNNVTIDIKTD---SDVQFMVQREDPALEVQQRKS---AWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRYEMPMYGSHSYIDPYQLL 167
            +VKELFG     +++   D    +  F  Q +   L    R S   A   + S+ V+SV AGILFT L+ SG +H +      Y MP YG+ SYI+P +LL
Sbjct:    2 RVKELFGGAQRESLNGAADRREGEYSFEPQNKRDPLSAPSRGSRQDALFTLTSIAVMSVIAGILFTFLFESGYIHDASQERPYYNMPTYGTTSYIEPVELL 102          
The following BLAST results are available for this feature:
BLAST of Ggra4881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J4L85.350e-6963.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q2I89.370e-4555.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3ECR12.190e-1540.52Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1VA146.700e-1031.35Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S0BVD96.670e-937.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..136
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:484297..484836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4881.t1Ggra4881.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 484297..484836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4881.t1 ID=Ggra4881.t1|Name=Ggra4881.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=180bp
MNPKGFAFALSSPLLRQCPLPLGIATSKPAYLTYAKRAHVARAPSWRASG
IPEPERTGSSADDERLNQELQAKVKELFGSRNNVTIDIKTDSDVQFMVQR
EDPALEVQQRKSAWTVIWSVGVLSVTAGILFTALYYSGAVHGSFDSEKRY
EMPMYGSHSYIDPYQLLEESQQAQDSAAQ*
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