Ggra4868.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4868.t1
Unique NameGgra4868.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length380
Homology
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BLAST of Ggra4868.t1 vs. uniprot
Match: A0A2V3ILN6 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILN6_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 6.240e-17
Identity = 91/360 (25.28%), Postives = 164/360 (45.56%), Query Frame = 0 
Query:    6 DVLKFMGPEGLGSISIGGFYTNAPRFITNVTPKVQYRQRLRTWMKMITTFAEV-DSKSKALCRGAGHLIYLESDSMAQEMLDKAQSAGKLSFDFDES----DPGKRK-MIEAIIRTIALDTPTEIVKREVDLLTNIHSSQRDSNESVASFAAKFQSAVAMYANHTLCMN-EAYTRQFAILMLRNAKLSPDTMNALTFQLTAEQGSTEEVATMILVLSKSELVKLRE--SIMTNEDTKVIRDKLSKLQQKLVDKTNTA----------VFTITMKRAAALLATVHESHTQKSDL---QRDRHLQKSFLGKW---FTQKQPYRHEYIKKMKEKSSFKA------------CGRPGHWWKDKE 328
            D+   MGP   G     GF    P  +T  T K ++R+++  W+     FA+  D K+K +    G  +    D++    +++A +AG ++ D +E      P K+  ++  II  +A D+PT+ ++R V ++ N+ +  R + ES A FA ++Q+A   Y NH      +  ++ FA+++L NAK+     +++  +L +   S  E    I V+SK  L ++R+  + + + D+   R+  +K     V  T  A          VF I++  A  +L  +      K D    QR++ +  S LGK      ++ P    Y +  ++KS   +            C    HW+KD E
Sbjct:    5 DLFTVMGP---GRAPTPGFDMLLPPRLTTTTDKYKWRKQVSLWVTTFKRFAKGGDKKAKGILSALGLTLLNSLDTIFSSQVEQAITAGIINLDEEEDTNDEQPNKQVGIVNEIIDLVAKDSPTDGIRRLVQMMRNVFNCTRKNGESPAIFARRYQAAALDYLNHCDTGTIQQDSQNFAMILLENAKIPASVYSSVITRLVSTITSRSEATNKIFVISKDRLTEIRDKANALQSTDSSGDREATAKSIIDAVTATVDANELHVRQDRTVFRISLDDAVEVLKDLKVEDEDKPDGGYGQREKRIG-SMLGKRDFNHGERHPNHQRYNQGRRQKSYIPSGQGPKAVSRCRNCKEFNHWYKDPE 360
The following BLAST results are available for this feature:
BLAST of Ggra4868.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILN66.240e-1725.28Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:354902..356041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4868.t1Ggra4868.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 354902..356041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4868.t1 ID=Ggra4868.t1|Name=Ggra4868.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=380bp
MSHTADVLKFMGPEGLGSISIGGFYTNAPRFITNVTPKVQYRQRLRTWMK
MITTFAEVDSKSKALCRGAGHLIYLESDSMAQEMLDKAQSAGKLSFDFDE
SDPGKRKMIEAIIRTIALDTPTEIVKREVDLLTNIHSSQRDSNESVASFA
AKFQSAVAMYANHTLCMNEAYTRQFAILMLRNAKLSPDTMNALTFQLTAE
QGSTEEVATMILVLSKSELVKLRESIMTNEDTKVIRDKLSKLQQKLVDKT
NTAVFTITMKRAAALLATVHESHTQKSDLQRDRHLQKSFLGKWFTQKQPY
RHEYIKKMKEKSSFKACGRPGHWWKDKEEFREMMKEKRRRSQISIGEPQR
VQDDTPPESEDQKPKIDNRITMRKSLFPR*
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