Ggra4858.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4858.t1
Unique NameGgra4858.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A2V3J409 (Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J409_9FLOR)

HSP 1 Score: 270 bits (690), Expect = 4.670e-89
Identity = 127/157 (80.89%), Postives = 142/157 (90.45%), Query Frame = 0
Query:    3 SVANKRISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYATPR 159
            SVANKRI REL LLARGSAAPGIAAWAR++A RLD+LDAEI GA DTPY  GVFRLE++IPREYPFKPPRVRF+TKIYHPN+D++GRICLDSLNMPP G WKPSLN+ATVLT+IQALMSTPNA+DGLMADIT +YRT PA+FRR AE+WT  YA PR
Sbjct:    4 SVANKRIKRELDLLARGSAAPGIAAWARDEASRLDLLDAEICGAADTPYHSGVFRLELHIPREYPFKPPRVRFLTKIYHPNIDTEGRICLDSLNMPPNGAWKPSLNIATVLTTIQALMSTPNADDGLMADITDEYRTTPAVFRRKAEEWTNMYANPR 160          
BLAST of Ggra4858.t1 vs. uniprot
Match: R7Q2H8 (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2H8_CHOCR)

HSP 1 Score: 232 bits (592), Expect = 3.840e-74
Identity = 106/153 (69.28%), Postives = 130/153 (84.97%), Query Frame = 0
Query:    4 VANKRISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYA 156
            +AN+R+ REL+LL+RG AAPGIAAW R++ +RLDVLDAEI GA DTPY+ G+FRLE+ IP EYP KPPRVRF+TKIYHPN+DS GRICLDSLNMPPKG WKPSLNV+T+LT+IQALMS PN +DGLM +IT ++R  P +FR  A + T++YA
Sbjct:    5 MANRRMKRELELLSRGGAAPGIAAWPRDEGNRLDVLDAEIRGASDTPYEGGIFRLEVVIPAEYPLKPPRVRFMTKIYHPNIDSQGRICLDSLNMPPKGAWKPSLNVSTLLTTIQALMSEPNGDDGLMVEITEEFRRRPEVFRNKARECTRKYA 157          
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A7S4FAF6 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAF6_CHRCT)

HSP 1 Score: 188 bits (478), Expect = 3.760e-57
Identity = 96/162 (59.26%), Postives = 117/162 (72.22%), Query Frame = 0
Query:    1 MNSVANKRISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYATPRAAS 162
            M  V + R+ +EL ++ R    PGI+AWA E+      L+A I GADDTPY  G FRL+INIP  YPF+PP+V FVT IYHPN+DS GRICLD LNMPPKG WKPSLNV+T+L+SIQ LMS PNA+DGLM DITH+Y  N A F R A + T ++A   AA+
Sbjct:    1 MTHVGHLRLKKELNMMYR-EPPPGISAWANEEDS--SELEAVIEGADDTPYAKGRFRLKINIPPRYPFEPPKVHFVTPIYHPNIDSAGRICLDILNMPPKGAWKPSLNVSTMLSSIQLLMSHPNADDGLMLDITHEYMHNFAQFERKAAEHTLKHARTNAAA 159          
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A6J8D2F6 (UBE2T n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8D2F6_MYTCO)

HSP 1 Score: 184 bits (468), Expect = 6.980e-56
Identity = 85/155 (54.84%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYATPRAAS 162
            R+ +EL++L++ S   GI+ W++++  R+D+L A+I G + TPY +G+F LEI IP  YPF+PP+VRFVT IYHPN+D+ GRICLD+L MPPKG WKP LN++TVLTSIQ LM+ PN ED LMADI+++Y+ N  L+   A+QWTK +A  +  S
Sbjct:    6 RMKKELEMLSK-SPPYGISCWSKDE--RIDLLQAQILGGEGTPYHNGIFTLEIQIPERYPFEPPKVRFVTPIYHPNIDTGGRICLDTLKMPPKGAWKPCLNISTVLTSIQLLMAEPNPEDPLMADISNEYKYNKTLYVENAKQWTKNHAIEKNVS 157          
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A6J0AXV9 (ubiquitin-conjugating enzyme E2 T n=3 Tax=Camelidae TaxID=9835 RepID=A0A6J0AXV9_VICPA)

HSP 1 Score: 184 bits (467), Expect = 1.580e-55
Identity = 87/152 (57.24%), Postives = 113/152 (74.34%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYATPR 159
            R+ REL LLA     PGI  W  + ADR+D L A+I G  +TPY+ GVF+LE+NIP  YPF+PP+VRF+T IYHPN+DS GRICLD L +PPKG W+PSLN+A VLTS+Q LMS PN +D LMADI+ +++ N  +F + A QWT+++A  R
Sbjct:    6 RLKRELSLLAT-EPPPGITCW--QDADRMDDLRAQILGETNTPYEKGVFKLEVNIPERYPFEPPQVRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIAAVLTSVQQLMSEPNPDDPLMADISSEFKYNKPVFLQNARQWTEKHARQR 154          
BLAST of Ggra4858.t1 vs. uniprot
Match: ubiquitin-conjugating enzyme E2 T isoform X1 n=2 Tax=Meles meles TaxID=9662 RepID=UPI001E69D659 (ubiquitin-conjugating enzyme E2 T isoform X1 n=2 Tax=Meles meles TaxID=9662 RepID=UPI001E69D659)

HSP 1 Score: 184 bits (468), Expect = 1.670e-55
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYA 156
            R+ REL LLA     PGI  W  +  D++D L A+I GA DTPY+ GVF+LE+ IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ATVLTSIQ LMS PN +D LMADI+ +++ N  +F + A QWT+++A
Sbjct:    6 RLKRELNLLAT-EPPPGITCW--QDKDKMDDLQAQILGAADTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHA 151          
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A8D0WSR5 (UBC core domain-containing protein n=5 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0WSR5_PIG)

HSP 1 Score: 184 bits (467), Expect = 3.020e-55
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYA 156
            R+ REL LLA     PGI  W  +  DR+D L A+I G  +TPY+ GVF+LE+NIP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+A VLTS+Q LMS PN +D LMADI+ +Y+ N  +F R A QWT+++A
Sbjct:   40 RLKRELTLLAT-EPPPGITCW--QDGDRMDDLRAQILGGANTPYEKGVFKLEVNIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIAAVLTSVQQLMSEPNPDDPLMADISSEYKYNKPVFLRNARQWTEKHA 185          
BLAST of Ggra4858.t1 vs. uniprot
Match: ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580750 (ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580750)

HSP 1 Score: 183 bits (465), Expect = 3.080e-55
Identity = 80/156 (51.28%), Postives = 120/156 (76.92%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYATPRAASP 163
            R+ +E+Q+L++ S   GI+ W ++  D++D L+A+I G D TPY++G+F++EI +P  YPF+PP+VRF+T IYHPN+D+ GRICLD+L MPPKG WKP LN++TVLTSIQ LM+ PN ED LM +I+++++ N  L+ + A++WTKQ+A     +P
Sbjct:    6 RMKKEIQMLSQ-SPPHGISCWPKD--DKIDELEAQILGGDGTPYENGIFKIEIQVPERYPFEPPKVRFITPIYHPNIDNGGRICLDTLKMPPKGAWKPCLNISTVLTSIQLLMAEPNPEDPLMTEISNEFKYNKVLYLQHAKEWTKQHAMAEVTAP 158          
BLAST of Ggra4858.t1 vs. uniprot
Match: A0A3Q7T9J5 (ubiquitin-conjugating enzyme E2 T n=5 Tax=Caniformia TaxID=379584 RepID=A0A3Q7T9J5_VULVU)

HSP 1 Score: 183 bits (464), Expect = 3.620e-55
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYA 156
            R+ REL LLA     PGI  W  +  D++D L A+I GA DTPY+ GVF+LE+ IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ATVLTSIQ LMS PN +D LMADI+ +++ N  +F + A QWT+++A
Sbjct:    6 RLKRELNLLAT-EPPPGITCW--QDNDQMDDLRAQILGAADTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHA 151          
BLAST of Ggra4858.t1 vs. uniprot
Match: M3VUS9 (Ubiquitin conjugating enzyme E2 T n=35 Tax=Boreoeutheria TaxID=1437010 RepID=M3VUS9_FELCA)

HSP 1 Score: 182 bits (463), Expect = 3.990e-55
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    8 RISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTPYQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQWTKQYA 156
            R+ REL+LLA     PGI  W  +  D++D L A+I GA DTPY+ GVF+LE+ IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ATVLTSIQ LMS PN +D LMADI+ +++ N  +F + A QWT+++A
Sbjct:    6 RLKRELKLLAT-EPPPGITCW--QDKDQMDDLRAQILGAADTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHA 151          
The following BLAST results are available for this feature:
BLAST of Ggra4858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4094.670e-8980.89Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilar... [more]
R7Q2H83.840e-7469.28UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A7S4FAF63.760e-5759.26Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6J8D2F66.980e-5654.84UBE2T n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A6J0AXV91.580e-5557.24ubiquitin-conjugating enzyme E2 T n=3 Tax=Camelida... [more]
ubiquitin-conjugating enzyme E2 T isoform X1 n=2 Tax=Meles meles TaxID=9662 RepID=UPI001E69D6591.670e-5557.72ubiquitin-conjugating enzyme E2 T isoform X1 n=2 T... [more]
A0A8D0WSR53.020e-5557.72UBC core domain-containing protein n=5 Tax=Sus scr... [more]
ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145807503.080e-5551.28ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Pec... [more]
A0A3Q7T9J53.620e-5557.72ubiquitin-conjugating enzyme E2 T n=5 Tax=Caniform... [more]
M3VUS93.990e-5557.72Ubiquitin conjugating enzyme E2 T n=35 Tax=Boreoeu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..157
e-value: 2.0E-54
score: 196.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..210
NoneNo IPR availablePANTHERPTHR24068:SF278UBIQUITIN-CONJUGATING ENZYME E2 Tcoord: 7..160
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 7..160
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..157
e-value: 1.2E-54
score: 186.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..161
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..151
e-value: 1.0E-40
score: 138.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..157
score: 48.855358
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..152
e-value: 4.81522E-59
score: 180.476
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 80..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:302257..302889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4858.t1Ggra4858.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 302257..302889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4858.t1 ID=Ggra4858.t1|Name=Ggra4858.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MNSVANKRISRELQLLARGSAAPGIAAWAREQADRLDVLDAEITGADDTP
YQHGVFRLEINIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPK
GVWKPSLNVATVLTSIQALMSTPNAEDGLMADITHQYRTNPALFRRTAEQ
WTKQYATPRAASPPPPPLPPPSSSPADEARATPQADRGADAERGADEQPL
QPRAKKAKTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS