Ggra4852.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4852.t1
Unique NameGgra4852.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length106
Homology
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A2V3IXM0 (Protein disulfide-isomerase LQY1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM0_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 4.080e-41
Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    1 MIDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSDPLXXXXXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            MI+Q  IAI+ATM+ G+GGGIALVAWTE+QGKRTELRENTQPC EC G T TVCNVCNGSK DPL    XXXXXXXXXXXXXXXXXX GIQPRFLDRLSP+DFMD
Sbjct:    1 MIEQSTIAIIATMLAGMGGGIALVAWTESQGKRTELRENTQPCAECQGETTTVCNVCNGSKQDPLDDSKXXXXXXXXXXXXXXXXXXSGIQPRFLDRLSPDDFMD 105          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A1X6NIH9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIH9_PORUM)

HSP 1 Score: 89.4 bits (220), Expect = 1.870e-20
Identity = 50/111 (45.05%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    1 MIDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSDPLXXXXXXXXXXXXXXXXXXXXXXX------GIQPRFLDRLSPEDFMD 105
            M+D   ++ +   V G  GGIAL+A+TE QGKR + R N QPC EC G  +T CNVC G+  DPL              XX             GIQPRFLDR+SP+DFMD
Sbjct:   46 MVDYGTLSGLGVAVAGAFGGIALMAFTEQQGKRGQERTNLQPCVECKGTKVTTCNVCKGNGLDPLAEALGEDKATKCTYXXGAGDLKCFNCAGSGIQPRFLDRVSPDDFMD 156          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A5J4YNM6 (Protein SPA, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNM6_PORPP)

HSP 1 Score: 79.3 bits (194), Expect = 2.330e-16
Identity = 60/107 (56.07%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    1 MIDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSDPLXXXXXXXXXXXXXXXXXXXXXXXGIQPRFL--DRLSPEDFMD 105
            ++D   +  V T ++G+GGGI LVAWTENQG RTE R N QPC +C G     C +C G+  DP+    XXXXXXXXXXXXXXXXXXX         DRLSP+DFMD
Sbjct:   69 VVDTNTVIAVVTALLGVGGGIGLVAWTENQGLRTEQRVNDQPCFDCKGSKQVTCGICKGNGLDPVFKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLSPDDFMD 175          
BLAST of Ggra4852.t1 vs. uniprot
Match: M2XWY2 (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWY2_GALSU)

HSP 1 Score: 72.8 bits (177), Expect = 4.880e-14
Identity = 55/94 (58.51%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   12 TMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSDPLXXXXXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            T  +G+  GIA + WTE QG R   REN QPC  C+G+    C  C GS  +P      XXXXXXXXXXXXXXXXXX IQPR+LDR SPEDF+D
Sbjct:   59 TAALGLTAGIAFLVWTEKQGVRGSQRENLQPCVVCNGQKRLECIRCKGSGKNPTEESELXXXXXXXXXXXXXXXXXXXIQPRYLDRYSPEDFLD 152          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A1Z9KWH2 (Uncharacterized protein n=1 Tax=Synechococcus sp. TMED187 TaxID=1986595 RepID=A0A1Z9KWH2_9SYNE)

HSP 1 Score: 64.7 bits (156), Expect = 2.600e-10
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   11 ATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSD 63
            A ++VG+GGG+ L+A+ EN GK+ E R+N QPC  C G+ +  C +C+GS  D
Sbjct:   48 AALLVGVGGGVGLIAFAENAGKQNEERQNVQPCVVCTGKMVVDCTICSGSGVD 100          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A7S3AF15 (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AF15_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 2.050e-9
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 0
Query:    1 MIDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNGSKSDP 64
            MID   +     +++G+GGG+ L+A TE  GKR E + N QPC  C    I  C +C G+  DP
Sbjct:   44 MIDNSFLVGGGVLLLGLGGGVGLIALTEQAGKRNEAKVNAQPCVVCKVEQIVTCTICQGTGEDP 107          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A7J7IEW1 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEW1_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 4.540e-9
Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 0
Query:    3 DQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNG-SKSDPLXXXXXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            D   +A +    VG+  G+ ++A+TE QG+R + R  T+PC +C G     C  C G  K         XXXXXXXX          G+QPR+LDR+ PED MD
Sbjct:   56 DNGTLAAIVVGAVGVFVGVGILAFTEAQGERGKARGRTEPCVDCLGNGQVACGYCQGRGKLGFGQYEQDXXXXXXXXMVACLNCGGTGLQPRYLDRIRPEDLMD 159          
BLAST of Ggra4852.t1 vs. uniprot
Match: A0A7S3W6S8 (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W6S8_EMIHU)

HSP 1 Score: 60.5 bits (145), Expect = 6.690e-9
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    2 IDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTE----CDGRTITVCNVCNGSKSDPL 65
            ID  +I   A  ++G+GGG+ L+A+TEN GKR E  +N+QPC       +G  +T CNVC G+  DPL
Sbjct:   54 IDVNSIIGAAVGLLGVGGGVGLIAFTENAGKRNEEADNSQPCVTPGCVANGGVVT-CNVCKGTGVDPL 120          
BLAST of Ggra4852.t1 vs. uniprot
Match: M1UNZ2 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UNZ2_CYAM1)

HSP 1 Score: 55.8 bits (133), Expect = 1.920e-7
Identity = 40/98 (40.82%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   11 ATMVVGIG--GGIALVAWTENQGKRTELRENTQPCTECDGRTITVCNVCNG-SKSDPLXXXXXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            A +V G+G   GI L+A+TE QG+R + R   +PC EC G     C  C G  K           XXXXX           G+QPR+LDR+ PED MD
Sbjct:   63 ALIVGGLGTIAGIGLLAFTEVQGERGKARGRREPCVECRGDGQVACGYCQGRGKLGFGQYEKECSXXXXXSTVVCLNCGGSGLQPRYLDRIRPEDLMD 160          
The following BLAST results are available for this feature:
BLAST of Ggra4852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IXM04.080e-4181.90Protein disulfide-isomerase LQY1, chloroplastic n=... [more]
A0A1X6NIH91.870e-2045.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YNM62.330e-1656.07Protein SPA, chloroplastic n=1 Tax=Porphyridium pu... [more]
M2XWY24.880e-1458.51Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]
A0A1Z9KWH22.600e-1047.17Uncharacterized protein n=1 Tax=Synechococcus sp. ... [more]
A0A7S3AF152.050e-940.63Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7J7IEW14.540e-939.42Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S3W6S86.690e-945.59Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
M1UNZ21.920e-740.82Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF27PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTICcoord: 2..98
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 2..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 40..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:285749..286165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4852.t1Ggra4852.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 285749..286165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4852.t1 ID=Ggra4852.t1|Name=Ggra4852.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=106bp
MIDQQAIAIVATMVVGIGGGIALVAWTENQGKRTELRENTQPCTECDGRT
ITVCNVCNGSKSDPLDDSKPCAYCEGEGSIKCFNCAGSGIQPRFLDRLSP
EDFMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf