Ggra4814.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4814.t1
Unique NameGgra4814.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Homology
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BLAST of Ggra4814.t1 vs. uniprot
Match: R7Q9W5 (APH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W5_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 1.170e-33
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0 
Query:  130 MHISRIRSICPSYTDDHDLQNASPWRRLGWYKQTESWALSVIMQHGMNVIGRLTQKRNMAYSAVLSCKLDKLCLNGTP 207
            MHISRIRSIC S+TD H  Q+ASPWRR+GW++QTE WALSVIM+HGMNVIGRLTQKRN AYS VLSCK+DK+CLN TP
Sbjct:    1 MHISRIRSICSSHTDGHGHQSASPWRRIGWFRQTEFWALSVIMRHGMNVIGRLTQKRNKAYSTVLSCKVDKICLNSTP 78
The following BLAST results are available for this feature:
BLAST of Ggra4814.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q9W51.170e-3379.49APH domain-containing protein n=1 Tax=Chondrus cri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:87227..87916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4814.t1Ggra4814.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 87227..87916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4814.t1 ID=Ggra4814.t1|Name=Ggra4814.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
METIPSRVHLVIVSVQRRSILALRSNNTLCIPVLSPPEDDNYDDFPLLAD
WRTQTDDLCSAVLRTFSIHTYAATPLWYRPAPDHYDPPMASEAVVLLEPL
DNTFAFSAGLEWVGFNALHGVAWTSPHQDMHISRIRSICPSYTDDHDLQN
ASPWRRLGWYKQTESWALSVIMQHGMNVIGRLTQKRNMAYSAVLSCKLDK
LCLNGTPGIWNAVTYELTANTLQLIYTAS*
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