Ggra4732.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4732.t1
Unique NameGgra4732.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length233
Homology
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A2V3J389 (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J389_9FLOR)

HSP 1 Score: 348 bits (892), Expect = 2.490e-119
Identity = 165/232 (71.12%), Postives = 196/232 (84.48%), Query Frame = 0
Query:    1 MNNPPQHLSFFSDVIEENPNFKPNVTCPSAEKHLDLLVDNTPYSRFYHVTVTDASRRPQYDLVAIAEPTGAITLPVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYAFAARGKIAQFVNER 232
            M  PPQHL+FFSDV  +NP+F+PNVT     ++ DLLVDN+P+SRFYHV V DASR+P+YDLVAIAEPTGAITLPV++QN+IALIR WR++PS+ PGS  FN PL+S HGFYS ELPRGFPE  E+H DAAAREVREELG+ T+KV QLGWCNFNTA+ MTDIPV+AVLVD + +V D KDE EVI +IEWVSME+LGD V+ G IRC LTLAA+SYAFAARG+IA+FV +R
Sbjct:    1 MTTPPQHLAFFSDVKGKNPDFQPNVTRSGLNQNTDLLVDNSPFSRFYHVVVNDASRQPRYDLVAIAEPTGAITLPVDDQNRIALIRHWRAIPSTVPGSVPFNNPLKSSHGFYSIELPRGFPERDETHCDAAAREVREELGIGTRKVCQLGWCNFNTAIAMTDIPVFAVLVDPQEKVTDSKDEAEVIDSIEWVSMEQLGDYVLSGAIRCALTLAAISYAFAARGQIAEFVRKR 232          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A1X6NYK3 (Nudix hydrolase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYK3_PORUM)

HSP 1 Score: 115 bits (288), Expect = 9.170e-27
Identity = 64/138 (46.38%), Postives = 81/138 (58.70%), Query Frame = 0
Query:   36 LLVDNTPYSRFYHVTVTDASRRPQYDLVAIAEPTGAITLPVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGV---ATKKVLQLGWCNFNTALTMTDIPVYAVLV 170
            LLV N PYS  +H+ V      P YD+  IAEP GA+ LPV    ++AL+R +R VP++              HGF S E PRGFP  GES A AA REV EE+G+   A   V  LGW N NT++ ++DIPV+AV V
Sbjct:   65 LLVANAPYSVVHHLAVLAGDGTPLYDVPGIAEPRGAVGLPVAADGRVALLRTYRPVPAAXXXXXXXXXXXXGGHGFVSVEAPRGFPAGGESAAAAAMREVAEEVGLPPSAVGGVRPLGWVNVNTSVYLSDIPVFAVRV 202          
BLAST of Ggra4732.t1 vs. uniprot
Match: NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F1803E5 (NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F1803E5)

HSP 1 Score: 79.3 bits (194), Expect = 1.720e-14
Identity = 51/140 (36.43%), Postives = 68/140 (48.57%), Query Frame = 0
Query:   87 QWRS----VPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYAFAAR 222
            QW +    V  S P   A         G  S E PRG  + GE   + A RE+REE G+    V ++G  +  T L  T + VY  +VD    VA Q +  E + N  WV   +LG  +  G I CG+TLAA++ A AAR
Sbjct:   49 QWSTSGVVVVPSGPAGVALVPMYRYALGTASLEFPRGARDPGEQAHETAVRELREEAGLVATSVHEVGMLHPETGLIETPVHVYRAIVDPSQSVAAQPETMESVCNPIWVPWGDLGSWLRAGRITCGVTLAALTLAVAAR 188          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A8I1JIK1 (NUDIX hydrolase n=1 Tax=Pseudomonas putida TaxID=303 RepID=A0A8I1JIK1_PSEPU)

HSP 1 Score: 65.5 bits (158), Expect = 1.340e-9
Identity = 53/191 (27.75%), Postives = 95/191 (49.74%), Query Frame = 0
Query:   34 LDLLVDNTPYSRFYHVTVTDASRRPQYDLVAIAEP---TGAITLPVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYAFAA 221
            ++ ++  TP+  F  V + D +R        + EP    GA+ +P+    ++ L             S+ F + +    G  S E PRG  + GE+ A+AA RE+ EELG+   +V +LG  + NT+L  + + +YAV V   T   + + +GEV+  +   + EE+ + +  G+I  G T++A+    +A
Sbjct:    9 IETVLLETPF--FNVVDLNDGTRPEGKGYKVVKEPKAINGAVIIPMLPDGKLIL-------------SNLFRRAI----GTMSIEFPRGKVDDGENPAEAAIRELMEELGMKALRVKELGKMHSNTSLLSSAVAIYAVSV---TGEVEGETDGEVMSTMV-KTPEEIQEMIFNGSITDGHTISALMMLISA 176          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A847Y0K9 (NUDIX hydrolase n=1 Tax=Leptolinea sp. TaxID=2699749 RepID=A0A847Y0K9_9CHLR)

HSP 1 Score: 58.2 bits (139), Expect = 6.040e-7
Identity = 55/180 (30.56%), Postives = 80/180 (44.44%), Query Frame = 0
Query:   48 HVTVTDASRRPQYDLVAIAEPTGAITL-PVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYAFAARGKIA 226
            HV + D  R+  YD V   + TGA+T+ PV++Q +I  +RQ+R                         ELP G  E  E  A  AAREVREE+G+A   V +LG        +   + VY +   H + +    DE       E + +E++ + V    IR G TLA +  A  +  K A
Sbjct:   23 HVRLPDG-RKTTYDYV---KHTGAVTMVPVDDQGRIWFVRQYRMGVKGI-----------------LLELPAGTLEENEDPAVCAAREVREEIGMAADNVTKLGEFFLAPGYSSEYMHVYLMTGLHPSPLKHDDDE---FLETEAIPIEKVLEMVNNDQIRDGKTLACLMLALRSLKKAA 178          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A2G6KIX4 (NUDIX hydrolase n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6KIX4_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 6.550e-7
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  113 STELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVS 216
            +TE+P G  E GESH +AA RE+ EE G +T +   LGW   N A        + V  D +       D+GE I  ++ +S+EE+ D + KG++R  L L  +S
Sbjct:   95 TTEIPAGIIEDGESHENAAKRELLEETGYSTDRWEYLGWVEPNPAFQNNRCHQW-VARDVRRTNRQNLDDGEAIA-VQELSVEEVRDKIHKGDMRNSLALLTLS 196          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A523TUP5 (NUDIX hydrolase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A523TUP5_9CHLR)

HSP 1 Score: 57.8 bits (138), Expect = 8.320e-7
Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 0
Query:   63 VAIAEPTGAITL-PVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYA 218
            V I E  GAI L P++EQ+++ L+RQ+R                  P G    ELP G  E GES    AARE REE+G+A  ++  LG   F      T+  ++  L           D GEV++ +E +  E+L D +  G IR   T+A ++ A
Sbjct:   34 VDIVEHPGAIALIPIDEQDRVWLVRQYRH-----------------PAGEELLELPAGTLEPGESAEACAARESREEIGMAPGELTHLGG-TFLAPGYSTEF-LHFFLARGLIPAPLPPDPGEVLQ-LEKIPWEKLWDLIANGGIRDAKTIAGLTLA 170          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A5N9GRF9 (NUDIX hydrolase n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9GRF9_9CHLR)

HSP 1 Score: 56.2 bits (134), Expect = 3.390e-6
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  113 STELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVS 216
            +TE+P G  + GESH DAA RE+REE G  T K   LG    N A+   ++  + +  D +     + D+GE I  ++ +S++E+ + V  G IR  L LAA++
Sbjct:   78 TTEVPGGLIDPGESHGDAAVRELREETGYTTTKWTYLGASEPNPAV-YNNLLHHWLAEDVEATHPLELDDGEDII-VDIMSLDEVREAVQSGAIRHSLVLAALA 179          
BLAST of Ggra4732.t1 vs. uniprot
Match: NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001C051A56 (NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001C051A56)

HSP 1 Score: 57.8 bits (138), Expect = 3.740e-6
Identity = 47/179 (26.26%), Postives = 78/179 (43.58%), Query Frame = 0
Query:   49 VTVTDASRRPQYDLVAIAEPTGAITLPVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEV---IKNIEWVSMEELGDCVMKGNIRCGLTLAAVSYAFAARGK 224
            V   D + RP + L+   +  GA  LP+    ++ L+R++R                      +  E+PRGFPE GE+    AARE+ EELGV    + +LG           +  +Y    D   R+ ++  +G V   +  +  V+ +EL   +++G I     LAA +   A R +
Sbjct:  310 VRFRDGAVRPYFRLIGAVDSPGAAVLPMLSDGRLVLVRRFRHEARD-----------------WRWEVPRGFPEPGETGPVTAARELGEELGVNDPHLERLG--------VYGEDEIYLARFD-ADRLPERLTDGAVEEGVDEVRVVTADELAGLIVEGRITDEFLLAAYAMLQARRSR 462          
BLAST of Ggra4732.t1 vs. uniprot
Match: A0A431LJU4 (NUDIX hydrolase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A431LJU4_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 6.210e-6
Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 0
Query:   37 LVDNTPYSRFYHVTVTDASRRPQYDLVAIAEPTGAITLPVNEQNQIALIRQWRSVPSSAPGSDAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLGWCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDCVMKGNIRCGLTLAAVS 216
            +V   P+ +     V     RP    V   + T    LP++E+ +I L+ Q+R               LE     YS E+P G    GE+H DAA RE+ EE G+      QLG  + + +++  ++ VY  L    TR    + EG      + V+ ++  D VM G I   L++ A++
Sbjct:   15 VVYENPWIKVREDEVVQPDGRPGIYGVVHFKNTAIGVLPIDEEGKICLVGQYRYA-------------LE----IYSWEIPEGGCSQGETHLDAAKRELIEETGMVASNWTQLGSAHLSNSVS-DELAVY-YLATGLTR-GTPRPEGTEQLAYKHVTFDQALDMVMTGEITDALSILAIT 174          
The following BLAST results are available for this feature:
BLAST of Ggra4732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J3892.490e-11971.12Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A1X6NYK39.170e-2746.38Nudix hydrolase domain-containing protein n=1 Tax=... [more]
NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F1803E51.720e-1436.43NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 ... [more]
A0A8I1JIK11.340e-927.75NUDIX hydrolase n=1 Tax=Pseudomonas putida TaxID=3... [more]
A0A847Y0K96.040e-730.56NUDIX hydrolase n=1 Tax=Leptolinea sp. TaxID=26997... [more]
A0A2G6KIX46.550e-736.54NUDIX hydrolase n=1 Tax=candidate division KSB3 ba... [more]
A0A523TUP58.320e-733.12NUDIX hydrolase n=1 Tax=Anaerolineales bacterium T... [more]
A0A5N9GRF93.390e-636.54NUDIX hydrolase n=1 Tax=SAR202 cluster bacterium T... [more]
NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001C051A563.740e-626.26NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis Ta... [more]
A0A431LJU46.210e-627.78NUDIX hydrolase n=1 Tax=Candidatus Melainabacteria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 36..230
e-value: 1.4E-27
score: 98.4
NoneNo IPR availablePANTHERPTHR11839UDP/ADP-SUGAR PYROPHOSPHATASEcoord: 44..222
NoneNo IPR availableCDDcd03424ADPRase_NUDT5coord: 68..222
e-value: 9.17458E-19
score: 77.5301
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 71..197
e-value: 2.4E-12
score: 47.0
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 55..214
score: 12.713689
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 119..140
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 45..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:94724..95422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4732.t1Ggra4732.t1Gracilaria gracilis GNS1m malemRNAtig00000065_pilon 94724..95422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4732.t1 ID=Ggra4732.t1|Name=Ggra4732.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=233bp
MNNPPQHLSFFSDVIEENPNFKPNVTCPSAEKHLDLLVDNTPYSRFYHVT
VTDASRRPQYDLVAIAEPTGAITLPVNEQNQIALIRQWRSVPSSAPGSDA
FNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKKVLQLG
WCNFNTALTMTDIPVYAVLVDHKTRVADQKDEGEVIKNIEWVSMEELGDC
VMKGNIRCGLTLAAVSYAFAARGKIAQFVNER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase-like_dom_sf