Ggra4706.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4706.t1
Unique NameGgra4706.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A2V3IDN4 (Surfeit locus protein 4-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDN4_9FLOR)

HSP 1 Score: 231 bits (589), Expect = 3.540e-72
Identity = 134/282 (47.52%), Postives = 174/282 (61.70%), Query Frame = 0
Query:    1 MDMLRALDTHPLIRDFTKQFNRAKRSARPFS------------------------------KKKLAIPRMFALLFIAISTSATFVGCAMVFLTKWEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQRYR-------GLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            +D LRA+D +P+++  +   NR KR+ +P++                              +++L IPR  AL+ I  STSAT VG  MVF  K EK GA+LL+FATVYQQ++YGR          F             V        M  QR R       GLP+  DK  +RH++AL+TR+L+ LL++EMFDVIGWGW+ ++ P+A AVVVGYKTD MG LLM FY++ATV+SKQFW ID SAHVY AFKRDVMRFEFLQT+SI+SGL++LI +GPGAL
Sbjct:    5 IDALRAVDANPVVQQVSHALNRVKRATKPYTPFMTRALLVLAFVEDAIHTLVEYKSQLHFFERELWIPRYVALMLILTSTSATLVGSVMVFFNKLEKNGAKLLLFATVYQQLIYGRHSPITSGNLGFLIRNLCLCGTLLLV--------MSAQRVRDGLPALPGLPEMRDKHAQRHNVALLTRILMALLSVEMFDVIGWGWSFIMCPIALAVVVGYKTDMMGALLMSFYVLATVSSKQFWRIDASAHVYMAFKRDVMRFEFLQTVSILSGLLVLITTGPGAL 278          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A1X6NZ28 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ28_PORUM)

HSP 1 Score: 94.7 bits (234), Expect = 1.720e-19
Identity = 72/220 (32.73%), Postives = 115/220 (52.27%), Query Frame = 0
Query:   37 IPRMFALLFIAISTSATFVGCAMV------FLTKWEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWH---AYAVDEWDSESRMDCQRYR--GLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            +P   A   + ++   +FVG  ++      F  K+E  GA LL+    YQQ+VYGR        P  S +    V +   A A+  + ++SR+D  R    G+PD  +    +  + L +R+LL LL +E    +GW   V+  PV  AV VG+     G  L++ Y++  V +  FW +  S      + +DV+R+E++QTISIM GL+ML+++GPG L
Sbjct:   62 LPEWLAGFLLIVTVLLSFVGSGLLIAQKHAFKGKYEAVGAYLLLGCVTYQQLVYGR------HSPIGSGNLGFLVRNLCLAGALLLFLAQSRIDEGRTALPGVPDPGNSVTMQSYLKLASRVLLVLLAMEFLTTMGWVGCVLTAPVVVAVAVGWYMTLSGTALLVLYLVHNVLNSAFWSLGDS------YMKDVLRYEWVQTISIMGGLLMLVVNGPGEL 269          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A7S0XID0 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XID0_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 4.940e-19
Identity = 70/218 (32.11%), Postives = 107/218 (49.08%), Query Frame = 0
Query:   30 FSKKKLAIPRMFALLFIAISTSATFVGCAMVFLTK--WEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQRYRGLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            F K +  IP+    + I I+T  + +G A++   K   EK G   LI   +YQQ +YGR          F   +++ +     +               G+PD  DK      I L  R L+ LL++E    +G    +  +PV  AV+ GYK+   G LL++ Y +  V +  FW +   ++    F R+V R+EF+QTISIM GL++L+ SGPGAL
Sbjct:   57 FLKHQYGIPKAICGILIVITTIMSLLGAALILTQKPQLEKFGCYALISFVLYQQAMYGRHSPIGSGNFGFL-MRNLCLAGTLLMLLVQGRMSQGHTALPGIPDPGDKTTTVTYIQLAARALIVLLSLEFLSTLGPIGTLTTIPVLLAVLAGYKSQISGSLLLLIYFLHNVINSAFWSVRTDSY-RGEFDREVKRYEFVQTISIMGGLLLLVASGPGAL 272          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A5J4YLX1 (Surfeit locus protein 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLX1_PORPP)

HSP 1 Score: 81.3 bits (199), Expect = 1.700e-14
Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 0
Query:  127 GLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            G+PD  DK      I L  R LL LL++E     G    +V +PV  AV++G++T   G +L+I Y +  V++  FW I   +    +F R+V R+EF+QT+SIM GL++LI +GPG L
Sbjct:  158 GIPDPGDKSTTMTYIQLGARALLVLLSLEFLSNAGAFATLVTIPVLLAVLLGFQTQISGTVLLIMYFLHNVSNSAFWAIKSDSQ-RNSFDREVKRYEFVQTLSIMGGLMLLISTGPGQL 275          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A2V3IUG1 (Surfeit locus protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG1_9FLOR)

HSP 1 Score: 77.4 bits (189), Expect = 4.430e-13
Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 0
Query:   37 IPRMFALLFIAISTSATFVGCAMVFLTK------WEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQRYR---GLPDAP-DKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            IP   A   +  +   +F+  A++   K      +E   A  LI   VYQQ++YGR          F             +     +SR+   R     GL D   DK      + L +R++L LL +E    +G    ++ +PV  AV++GY+ +  G++L  FY++  + +  FW + G      A+   +M++EF QT+SIM GL++LIM GPGA+
Sbjct:   72 IPSFIAAFMLLTNIIISFIAIAIILAGKRFARGMYENLAAYALIGCVVYQQVLYGRHSPIGSGNVGFLVRNLCLSGSLLLIT---CQSRIAQGRSALPLGLLDGQADKQTTVAYLQLASRIMLVLLGLEFITTLGVLGTMMAIPVIVAVLIGYRLEISGIVLFGFYLVHNIINSAFWSVKG------AYISQIMQYEFFQTLSIMGGLLLLIMIGPGAI 281          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A7J7IDB8 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDB8_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 2.800e-12
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0
Query:  143 LMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            L  R++L LL I+    +G+   ++ VPV  AV+VGY+T   G +L+ FY +  +    FW +   +  Y  + RDV ++EF+QTISIM+G++ML+  GPGAL
Sbjct:  254 LAARIMLVLLPIDFLSSLGFMGTLLAVPVMIAVLVGYRTRVSGSILIAFYAVHNLLMSAFWRVRDHSP-YGQYARDVKQYEFVQTISIMAGVLMLVFEGPGAL 355          
BLAST of Ggra4706.t1 vs. uniprot
Match: R7QIV9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV9_CHOCR)

HSP 1 Score: 73.9 bits (180), Expect = 7.360e-12
Identity = 59/183 (32.24%), Postives = 88/183 (48.09%), Query Frame = 0
Query:   65 WEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQRYR---GLPDAP-DKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPG 243
            +E   A  LI    YQQ++YGR          F             +     ++RM   R     GL D   DK      + L +R+LL LL IE    +G    V+ +PV  AV+VGY+ +  G +L+I Y+   +    FW + GS      +   +M++EF QT+SIM GL++LI++GPG
Sbjct:  102 YENYAAYALIACIAYQQILYGRHSPIGSGNVGFLVRNLCLSGSLLLIT---CQTRMASGRSALPMGLLDGQTDKKTTVSYLQLASRILLVLLAIEFSFTMGTVGTVLTLPVILAVLVGYQLEISGGILLILYLAHNIIQSAFWSVSGS------YVSQIMQYEFFQTVSIMGGLLLLILTGPG 275          
BLAST of Ggra4706.t1 vs. uniprot
Match: M1V6V6 (Similar to surfeit locus protein 4 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6V6_CYAM1)

HSP 1 Score: 72.4 bits (176), Expect = 4.750e-11
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  143 LMTRLLLGLLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            L  R++L LL I+    +G+   ++ VPV  AV+ GY+T   G +L+ FY    +    FW ++  +  +  + RDV ++EF+QTISIM+G++ML+  GPGAL
Sbjct:  268 LTARIMLVLLPIDFLSSLGFLGTLLAVPVMVAVLAGYRTRISGSILIAFYAAHNLLMSAFWKVNDRSP-FGQYARDVKQYEFVQTISIMAGVLMLVFEGPGAL 369          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A1E4TKR1 (Uncharacterized protein n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TKR1_9ASCO)

HSP 1 Score: 62.8 bits (151), Expect = 6.390e-8
Identity = 59/215 (27.44%), Postives = 101/215 (46.98%), Query Frame = 0
Query:   37 IPRMFALLFIAISTSATFVGCAMVFLTKWEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQR-YRGLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGWGWAVVIVPV-----ACAVVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGAL 245
            +P +F  +F+  +  +  VG A++ L K       LL+   V Q ++YG        +  F  S+++ +     +   DS  R +  R + GLP+  +KD KR+   L  R++L  L I       W    ++V V        VV+G+KT      L+    I   ++  FW      +   + +RD +R+EF QT+SI+ GL+++  SG GA+
Sbjct:   82 VPYIFVAVFLLSNICSMLVGSALIMLQKHVMFAVCLLLAVVVGQALIYGLIF-----DLSFL-SRNLSLVGGLVMVLSDSVMRNNVSRGFPGLPELEEKDRKRYY-QLAGRIMLVFLFITFLFSGQWTIPRLVVSVLSLALCLMVVLGFKTKLSAAFLVFILTIYNFSANHFW-----TYATTSARRDFLRYEFFQTMSIVGGLILVASSGAGAI 284          
BLAST of Ggra4706.t1 vs. uniprot
Match: A0A161HIJ0 (Erv29p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A161HIJ0_9ASCO)

HSP 1 Score: 62.4 bits (150), Expect = 1.020e-7
Identity = 61/214 (28.50%), Postives = 97/214 (45.33%), Query Frame = 0
Query:   37 IPRMFALLFIAISTSATFVGCAMVFLTKWEKKGAQLLIFATVYQQMVYGRTL--TYHQREPRFSHSQHVPVWHAYAVDEWDSESRMDCQRYRGLPDAPDKDGKRHSIALMTRLLLGLLTIEMFDVIGW----GWAVVIVPVACA-VVVGYKTDFMGVLLMIFYIIATVTSKQFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPG 243
            +P + A+LF++I+  A  +G   V   K  + G   L+F  V Q +VYG     ++  R         + +  A+  D              GLP   DKD  ++ + L  R+LL  L I       W    G+  VI  VAC  VVVG+K      LL++   +  + +  +W             RD++R+E+ QT+SI+ GL++L+ SG G
Sbjct:  112 LPHIIAVLFLSINVVAMLIGSFSVVFKKRLEIGVGALLFVVVSQALVYGLIFKFSFFFRNVSLVGGLLIVLSDAFVRDRRSLS-------LPGLPVLEDKDRSKY-LQLAGRILLIFLFIAYMVTRNWTVIGGFFNVIGLVACIMVVVGFKARLSASLLVVLLSVQNLLTNPYWRYASRNPA-----RDLLRYEYFQTLSIVGGLILLVSSGAG 312          
The following BLAST results are available for this feature:
BLAST of Ggra4706.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDN43.540e-7247.52Surfeit locus protein 4-like n=1 Tax=Gracilariopsi... [more]
A0A1X6NZ281.720e-1932.73Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XID04.940e-1932.11Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YLX11.700e-1440.34Surfeit locus protein 4 n=1 Tax=Porphyridium purpu... [more]
A0A2V3IUG14.430e-1329.22Surfeit locus protein 4 n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IDB82.800e-1240.78Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
R7QIV97.360e-1232.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1V6V64.750e-1138.83Similar to surfeit locus protein 4 n=1 Tax=Cyanidi... [more]
A0A1E4TKR16.390e-827.44Uncharacterized protein n=1 Tax=Tortispora caseino... [more]
A0A161HIJ01.020e-728.50Erv29p n=1 Tax=Sugiyamaella lignohabitans TaxID=79... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002995Surfeit locus 4PFAMPF02077SURF4coord: 31..245
e-value: 3.6E-23
score: 82.5
NoneNo IPR availablePANTHERPTHR23427:SF1SURFEIT LOCUS PROTEIN 4coord: 32..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 248..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 159..178
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
IPR045214Surfeit locus 1/4PANTHERPTHR23427SURFEIT LOCUS PROTEINcoord: 32..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:11380..12226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4706.t1Ggra4706.t1Gracilaria gracilis GNS1m malemRNAtig00000065_pilon 11380..12226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4706.t1 ID=Ggra4706.t1|Name=Ggra4706.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MDMLRALDTHPLIRDFTKQFNRAKRSARPFSKKKLAIPRMFALLFIAIST
SATFVGCAMVFLTKWEKKGAQLLIFATVYQQMVYGRTLTYHQREPRFSHS
QHVPVWHAYAVDEWDSESRMDCQRYRGLPDAPDKDGKRHSIALMTRLLLG
LLTIEMFDVIGWGWAVVIVPVACAVVVGYKTDFMGVLLMIFYIIATVTSK
QFWMIDGSAHVYAAFKRDVMRFEFLQTISIMSGLVMLIMSGPGALFAGRE
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002995Surf4
IPR045214Surf1/Surf4