Ggra4681.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4681.t1
Unique NameGgra4681.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length287
Homology
BLAST of Ggra4681.t1 vs. uniprot
Match: A0A2V3IFB7 (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB7_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 3.670e-80
Identity = 155/290 (53.45%), Postives = 195/290 (67.24%), Query Frame = 0
Query:    1 MGWSSSITSNKLKEQRNDEEPPQYPTTASTALTNFLLQVNTAANRAGGFALPREAISHLQREIIKMSIRSYKAGL--GTESRTTRKPSTVTTDGPEGKRDAMMMQMLFDVQVVQHIFCDMGKGPASISDEENELNNLKSSISSMVDPNALSNCRASLQEAVLNYASRTCVLLGLLVQLTPGEGLQVKGSHSAKSAKTSSNLVALAKTVPRFTYLPAPMPSSYSITVEAPGGLNTKAM-GMLRNQV-SSTAATTHRKRDPESSVADYASKVTESVGRFGRGFFESFTRKVT 286
            MGWS++  +    +   +++ PQYPTTAST +TNFLL V  + N+AGGFALP EAI HL+REII   I +YK  L  G +             G     + + MQMLFD+QVVQ +F        S   ++++L +L+S++ +MVDP  L +CR SL  AV +YA+RT VLLGL+ +   G+ +++K  H   S  TSSNLV LA+TVPRFTYLPAPMPS+YSI V  P  LN KA  GMLR Q  SST+ +T RK+D ESSVADYASKVTESVGRFGRGFFESFTRKVT
Sbjct:  615 MGWSANKETETPSKTNQEDDEPQYPTTASTPMTNFLLDVCNSTNKAGGFALPFEAIDHLRREIIVTVITTYKKALMSGVKGNDDFGERASPRRGTTKFSETVSMQMLFDIQVVQELFTVPSTEAQSWVSDQSDLRDLESAVQTMVDPITLRSCRDSLTAAVSSYAARTSVLLGLIGRSVTGDEMRLKNPHIMASRNTSSNLVMLAQTVPRFTYLPAPMPSTYSIAVAGPT-LNAKATAGMLRTQATSSTSTSTLRKKDQESSVADYASKVTESVGRFGRGFFESFTRKVT 903          
BLAST of Ggra4681.t1 vs. uniprot
Match: R7QE47 (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE47_CHOCR)

HSP 1 Score: 184 bits (468), Expect = 2.470e-49
Identity = 117/296 (39.53%), Postives = 175/296 (59.12%), Query Frame = 0
Query:    1 MGWSSSITSNKLKEQRNDEE--PPQYPTTASTALTNFLLQVNTAANRAGGFALPREAISHLQREIIKMSIRSY---------KAGLGTESRTTRKPSTVTTDGPEGKRDAMMMQMLFDVQVVQHIFCDMGKGPASISDEENELNNLKSSISSMVDPNALSNCRASLQEAVLNYASRTCVLLGLLVQLTPGEGLQVKGSHSAKSAKTSSNLVALAKTVPRFTYLPAPMPSSYSITVEAPGGLNTKA-MGMLRNQVSSTAATTHRKRDPESSVADYASKVTESVGRFGRGFFESFTRK 284
            +GW+S+  S    E+   +     +YPT+ASTA T F+L+    ANRAGGFALP  AIS L+ E+ + +  +Y         K G   +S + R+     ++ PE      +MQMLFDV V++ +  +  K   + + +E  LN ++  + S +DP   ++C+ +L  +V  Y  RT V+ G + +         K    + S   SSNLV+L++TVPRFTYLPAPMPS+Y+    +  GL+ KA +G LR++ ++   ++  KR+ ESSVA+YASKV+ESVGR GRGFFES+TRK
Sbjct:  606 IGWASTAGSESESEKMKPDSFSDMRYPTSASTAATKFVLRACNYANRAGGFALPESAISFLREEMSRAAEHAYREAFVFYFPKHGGKKDSASLRE-----SEQPE----VAVMQMLFDVLVLKRLLPEAPKESRARNSKEG-LNAIEQQLHSAIDPINFASCKKALHGSVDGYCGRTSVMFGTITRRGVSNSSPRKRPLISSSQLASSNLVSLSRTVPRFTYLPAPMPSTYTTAGVSTAGLSAKAALGALRSEAAAANGSSFGKREVESSVAEYASKVSESVGRLGRGFFESWTRK 891          
The following BLAST results are available for this feature:
BLAST of Ggra4681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFB73.670e-8053.45Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
R7QE472.470e-4939.53Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
IPR033370Conserved oligomeric Golgi complex subunit 1PANTHERPTHR31658CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1coord: 15..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000124_piloncontigtig00000124_pilon:75953..76813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4681.t1Ggra4681.t1Gracilaria gracilis GNS1m malemRNAtig00000124_pilon 75953..76813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4681.t1 ID=Ggra4681.t1|Name=Ggra4681.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=287bp
MGWSSSITSNKLKEQRNDEEPPQYPTTASTALTNFLLQVNTAANRAGGFA
LPREAISHLQREIIKMSIRSYKAGLGTESRTTRKPSTVTTDGPEGKRDAM
MMQMLFDVQVVQHIFCDMGKGPASISDEENELNNLKSSISSMVDPNALSN
CRASLQEAVLNYASRTCVLLGLLVQLTPGEGLQVKGSHSAKSAKTSSNLV
ALAKTVPRFTYLPAPMPSSYSITVEAPGGLNTKAMGMLRNQVSSTAATTH
RKRDPESSVADYASKVTESVGRFGRGFFESFTRKVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033370COG1