Ggra4677.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4677.t1
Unique NameGgra4677.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Homology
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A2V3ISN5 (Putative rRNA methylase YtqB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN5_9FLOR)

HSP 1 Score: 298 bits (762), Expect = 3.370e-100
Identity = 142/210 (67.62%), Postives = 171/210 (81.43%), Query Frame = 0
Query:    1 MSTLASVDKEARTESVLERIRRSGSFTREAWHEAIRSTGIRTVIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCER 210
            MST ASV  E   E++L+++R S  F R+ W +AI  T + T IDATAGRGSDTISLG++VG EGVVHAFDIQ+ A +ET+ RYEE S+H  MG L L+ +SHEDFS LGL++ SV+CV YNLGWYP RGADRSIITK  STI SLKSAE LVAVGG+IS+MAYVGHKWGKEEEEAC++WT  LC ++WNV V+KYPNR+AAPSLI+CE+
Sbjct:    1 MSTAASVASEEHNETILQQMRHSSLFLRDIWQDAINRTKLSTAIDATAGRGSDTISLGQFVGNEGVVHAFDIQEAALDETKSRYEEASQHEAMGTLHLYKKSHEDFSVLGLEDGSVACVVYNLGWYPGRGADRSIITKVSSTIASLKSAEALVAVGGVISVMAYVGHKWGKEEEEACIEWTQSLCRQEWNVFVIKYPNRKAAPSLIVCEK 210          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A7S0BQU3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQU3_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 9.150e-33
Identity = 71/185 (38.38%), Postives = 108/185 (58.38%), Query Frame = 0
Query:   27 TREAWHEAIRSTGIRTVIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            +RE W  AIR     T IDAT GRG DT++L +  G  G+V A D+Q  A ++++   E+     +   +   N SHE F    ++ +SVS + YNLG+ P   +D++I+TK  ST+ SL +  GL+ +GGLI++ AY+  + G EEE A L   + L  + W V  +++ NR  APS+I  ER+
Sbjct:    8 SRELWSRAIRPGD--TAIDATCGRGKDTLTLAEMTGASGMVVAVDLQPSAIKQSKDYVEKNLFPEDRPTMRWVNESHERFPN-DIQAESVSAIVYNLGYLPGDESDKTIVTKSESTMKSLHAGLGLLRIGGLITVTAYIKQEGGPEEEAAVLDMASNLDPKVWTVNYIQWINRELAPSIIAIERR 189          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A1I2AL00 (Putative rRNA methylase n=1 Tax=Paenibacillus catalpae TaxID=1045775 RepID=A0A1I2AL00_9BACL)

HSP 1 Score: 112 bits (279), Expect = 2.320e-27
Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 0
Query:   42 TVIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLG--LKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            TVIDATAG G DT++L + VG  G+VHAFDIQQ+A + T+ R    +   ++  + LH  SH   +       +  V+ V +NLG+ P  G D S+IT   +T+ +L +A  L+  GG+++I  Y GH  G +E      W A L    +  V+ + P R  AP LI  E++
Sbjct:   23 TVIDATAGGGVDTLALAELVGPRGIVHAFDIQQEALDRTQERLRSYAHPDKLPEVKLHLVSHAKMAEAAGASAQGKVAAVMFNLGYLP--GGDESVITVPTTTVAALDAALSLLRRGGIVTIALYPGHPGGADEAAIVEDWAASLPGALYAAVLYRQPQRDTAPYLIAVEKR 192          
BLAST of Ggra4677.t1 vs. uniprot
Match: uncharacterized protein LOC110103402 isoform X3 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109F2BFD (uncharacterized protein LOC110103402 isoform X3 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109F2BFD)

HSP 1 Score: 112 bits (279), Expect = 1.130e-26
Identity = 70/187 (37.43%), Postives = 99/187 (52.94%), Query Frame = 0
Query:   28 REAWHEAIRSTGIRTVIDATAGRGSDTISLGKYVG---KEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            R  W   IR  G  TV+DAT G G DTI+L K V    + G VH  DIQ  A E T     E     +  ++ LH   H     +  K+ +V  +A+NLG+ P    D++IITK  +T+ +L++A  ++A GGLISI+ Y+GH  G+EE EA L + + L    WN    +  NR   P L+   +K
Sbjct:   76 RRIWKIVIR--GGDTVVDATCGNGYDTIALLKLVADDSRRGCVHGLDIQSSALENTCYLLRESVAEKQRELVKLHLLCHSRMEDILPKDAAVRLIAFNLGYLP--AGDKAIITKPHTTLFALQAASRIIASGGLISIVIYIGHPGGREELEAVLSFASSLAVEGWNCFKFETANRSTGPVLVFIIKK 258          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A4Y8M280 (SAM-dependent methyltransferase n=1 Tax=Cohnella luojiensis TaxID=652876 RepID=A0A4Y8M280_9BACL)

HSP 1 Score: 110 bits (274), Expect = 1.360e-26
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   43 VIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYE--EVSRHAEMGVLCLHNRSHE--DFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLI 206
            V+DATAG GSDT+ L + VG  G+V+AFDIQ +A E TRRR +  EVS    +  + L +  HE  D +        ++ V +NLG+ P  GA  ++IT+  +T+ +L SA  L+  GG+++ + Y GH+ G+ E +A   W +G+       V+ ++P +  +P LI
Sbjct:   24 VVDATAGNGSDTLFLARTVGSGGIVYAFDIQNEALENTRRRLDAAEVSEAGRLAEVTLVHAGHETMDDAVASDLHGRIAAVMFNLGYLP--GASSTVITEPATTLSALDSALRLLRGGGVLTAVVYPGHEGGQVEADAVQAWASGISLSVAQTVIYRFPQKTVSPYLI 189          
BLAST of Ggra4677.t1 vs. uniprot
Match: uncharacterized protein LOC110103402 isoform X1 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F67FE2 (uncharacterized protein LOC110103402 isoform X1 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F67FE2)

HSP 1 Score: 110 bits (276), Expect = 4.230e-26
Identity = 69/184 (37.50%), Postives = 98/184 (53.26%), Query Frame = 0
Query:   31 WHEAIRSTGIRTVIDATAGRGSDTISLGKYVG---KEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            W   IR  G  TV+DAT G G DTI+L K V    + G VH  DIQ  A E T     E     +  ++ LH   H     +  K+ +V  +A+NLG+ P    D++IITK  +T+ +L++A  ++A GGLISI+ Y+GH  G+EE EA L + + L    WN    +  NR   P L+   +K
Sbjct:   93 WKIVIR--GGDTVVDATCGNGYDTIALLKLVADDSRRGCVHGLDIQSSALENTCYLLRESVAEKQRELVKLHLLCHSRMEDILPKDAAVRLIAFNLGYLP--AGDKAIITKPHTTLFALQAASRIIASGGLISIVIYIGHPGGREELEAVLSFASSLAVEGWNCFKFETANRSTGPVLVFIIKK 272          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A544QX49 (SAM-dependent methyltransferase n=1 Tax=Peptacetobacter hominis TaxID=2743610 RepID=A0A544QX49_9FIRM)

HSP 1 Score: 108 bits (269), Expect = 6.970e-26
Identity = 60/169 (35.50%), Postives = 101/169 (59.76%), Query Frame = 0
Query:   44 IDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRA-APSLILCERK 211
            +DAT G+G DTI L + VG+EG V+AFD+Q++A  +T  + EE S   +   L L    + D       ++++ C  +NLG+ P  G +  IITK  +TI +++ +  L+  GG++ I  Y GH+ GKEE  A +++T  L  +K+NV++  + N++   P ++L E+K
Sbjct:   29 VDATMGKGYDTIYLSEAVGEEGFVYAFDVQKEAIVKTSEKLEE-SMFPQNTKLILDGHENID----KYVKENIKCAVFNLGYLP--GCEHKIITKPETTIQAIEKSLDLLCEGGVVCISVYTGHEGGKEEGNAIIEYTQNLEQKKYNVIMTTFINQKNNPPHIVLIEKK 190          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A081NT85 (SAM-dependent methyltransferase n=11 Tax=Paenibacillus TaxID=44249 RepID=A0A081NT85_9BACL)

HSP 1 Score: 107 bits (267), Expect = 1.350e-25
Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 0
Query:   42 TVIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDS--VSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            TV+DATAG G DT  L + VG  GVVHAFDIQQ A + T  R E+       G + LH RSHE       +E+   +  V +NLG+ P  GAD   +T   ST+ +L+++  L+  GG+I+I+ Y GH+ G EE     +W A L  + +  +  ++ N+   P  ++   K
Sbjct:   23 TVVDATAGGGVDTAFLARLVGSTGVVHAFDIQQQALDRTASRLEQ---ECPGGDVRLHLRSHEAMLDAIPEENHGRIGAVMFNLGYLP--GADHETVTAPASTLAALEASAQLIRRGGIITIVLYTGHRGGLEEASEVERWAAALPQKHFQTLQYRFMNQINHPPYVIAIEK 189          
BLAST of Ggra4677.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: uncharacterized protein LOC105968779 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DECF3 (LOW QUALITY PROTEIN: uncharacterized protein LOC105968779 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DECF3)

HSP 1 Score: 108 bits (269), Expect = 6.540e-25
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   21 RRSGSFTREAWHEAIRSTGIRTVIDATAGRGSDTISLGKYVG---KEGVVHAFDIQQDATEETRRRYEE-VSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            ++S       W   +R  G R VIDAT G G DT+++ K +    + G V+A D+Q+DA E T    +  VS H E  ++ L+   H     L  K D+V  VA+NLG+ P  G D+ I T+  +T+ +L++A+ +VA GGLIS++AY+GH  G+EE E    + A L    W    ++  NR +AP L+L  RK
Sbjct:  102 KKSTEVAHAVWKNVVRK-GDR-VIDATCGNGYDTLAMLKLIADDARRGRVYAMDLQKDALETTSSLLDRSVSTH-ERELVELYAMCHTKMEELVSKGDTVRLVAFNLGYLP--GGDKKIKTESETTLLALEAAKRIVAPGGLISVLAYIGHSGGREEFEKVQSFAAELPIDNWVCCKLQMLNRPSAPVLVLLSRK 291          
BLAST of Ggra4677.t1 vs. uniprot
Match: A0A1E5K045 (rRNA methyltransferase n=4 Tax=Oceanobacillus TaxID=182709 RepID=A0A1E5K045_9BACI)

HSP 1 Score: 105 bits (262), Expect = 6.570e-25
Identity = 66/169 (39.05%), Postives = 96/169 (56.80%), Query Frame = 0
Query:   43 VIDATAGRGSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHNRSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAEGLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRRAAPSLILCERK 211
            VIDAT G G+DT+ L + VGK G V+AFDIQQ A + T++  E+  R     V  +H  SH       +++D +    +NLG+ PR  +D+SIITK  STI +++     +   GLI I+ Y GH  G  E+EA LK  A L  + +NV+   + N++  P  IL  +K
Sbjct:   23 VIDATCGNGNDTLFLSRVVGKSGHVYAFDIQQQAIQNTKQELEKYHRE---NVTLIHG-SHSLIDD-NVQQDVIGGAIFNLGYLPR--SDKSIITKPDSTIEAIQKILEKLKKDGLIVIVVYYGHDGGANEKEAVLKHVANLDQKLYNVLQYGFVNQKNNPPFILAIQK 184          
The following BLAST results are available for this feature:
BLAST of Ggra4677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISN53.370e-10067.62Putative rRNA methylase YtqB n=1 Tax=Gracilariopsi... [more]
A0A7S0BQU39.150e-3338.38Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1I2AL002.320e-2737.21Putative rRNA methylase n=1 Tax=Paenibacillus cata... [more]
uncharacterized protein LOC110103402 isoform X3 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109F2BFD1.130e-2637.43uncharacterized protein LOC110103402 isoform X3 n=... [more]
A0A4Y8M2801.360e-2636.90SAM-dependent methyltransferase n=1 Tax=Cohnella l... [more]
uncharacterized protein LOC110103402 isoform X1 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F67FE24.230e-2637.50uncharacterized protein LOC110103402 isoform X1 n=... [more]
A0A544QX496.970e-2635.50SAM-dependent methyltransferase n=1 Tax=Peptacetob... [more]
A0A081NT851.350e-2537.21SAM-dependent methyltransferase n=11 Tax=Paenibaci... [more]
LOW QUALITY PROTEIN: uncharacterized protein LOC105968779 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DECF36.540e-2537.44LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A1E5K0456.570e-2539.05rRNA methyltransferase n=4 Tax=Oceanobacillus TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010719Putative rRNA methylasePFAMPF06962rRNA_methylasecoord: 67..208
e-value: 1.4E-32
score: 112.5
IPR010719Putative rRNA methylasePANTHERPTHR35276S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEINcoord: 14..210
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 17..212
e-value: 1.1E-46
score: 160.8
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 42..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000124_piloncontigtig00000124_pilon:70342..70980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4677.t1Ggra4677.t1Gracilaria gracilis GNS1m malemRNAtig00000124_pilon 70342..70980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4677.t1 ID=Ggra4677.t1|Name=Ggra4677.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MSTLASVDKEARTESVLERIRRSGSFTREAWHEAIRSTGIRTVIDATAGR
GSDTISLGKYVGKEGVVHAFDIQQDATEETRRRYEEVSRHAEMGVLCLHN
RSHEDFSFLGLKEDSVSCVAYNLGWYPRRGADRSIITKQPSTIPSLKSAE
GLVAVGGLISIMAYVGHKWGKEEEEACLKWTAGLCSRKWNVVVVKYPNRR
AAPSLILCERKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010719rRNA_methylase
IPR029063SAM-dependent_MTases