Ggra4520.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4520.t1
Unique NameGgra4520.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length356
Homology
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 99.8 bits (247), Expect = 1.810e-19
Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNGSL 350
            CFPA A+V++ DG  +KM D+ +GD + V +G+FSPVFMFTH+L  V   FV  Q  SG+ L+++P HY+Y +G L  A +VK G  ++L + SL
Sbjct:  310 CFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSL 404          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A2V3IKI5 (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 4.930e-17
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNG 348
            CFPASASV +RDG R++M ++ +GD I VG G +S VF+FTHR   VL RFV+    SG  + ++  H++Y +G+L  A S + G E+ +G+G
Sbjct:  662 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSG 754          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A2V3IKL0 (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 4.940e-17
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNG 348
            CFPASASV +RDG R++M ++ +GD I VG G +S VF+FTHR   VL RFV+    SG  + ++  H++Y +G+L  A S + G E+ +G+G
Sbjct:  666 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSG 758          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A2V3J2J0 (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 4.100e-15
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNGS 349
            CFPA A VR+ DG  R+M  + +GD ++VGNG++SP+FMFTH+   +   FV  Q D   +L ++  H++YA+   V A +V++G  + L +GS
Sbjct:  214 CFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGS 307          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A1X6P5E7 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5E7_PORUM)

HSP 1 Score: 79.7 bits (195), Expect = 1.120e-12
Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  255 ECFPASASVRMRDGGRRKMRDIAVGDEIYVGNG----LFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEM 343
            +CFPA A+V + DG    M D+A+GD++ V  G     FSPVFMFTHRLP     +VR  L  G  L  S  HYVYA  +LV A +V +G  +
Sbjct:  145 DCFPADAAVELTDGRVVAMADLAIGDKVRVAAGDVPAAFSPVFMFTHRLPTEPRAYVRLGLADGGALVASAGHYVYAGERLVAAAAVAIGDTL 237          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A2V3IVL1 (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVL1_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 2.150e-12
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDN-LAVSPNHYVYADGQLVTAQSVKLGQEM 343
            CFPASA+VR  DG    M  +AV + I VG G  S +F F HR P+ +S FV  +  + D  L +SP HY+Y +G+L TA++V++G  +
Sbjct:  403 CFPASAAVRRHDGAVLTMEQLAVAERIAVGAGQHSDLFFFGHRAPHAVSEFVSIRHGASDKPLRISPQHYLYVNGKLGTAKTVRVGDRL 491          
BLAST of Ggra4520.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 74.3 bits (181), Expect = 1.190e-11
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNGSLLS 352
            CFPA+A V + +G  + M  + +GD + VG   FS VFMFTH+   +   FV     SG  L+++  HY+Y +G +  A++V+ G  + L +G+  S
Sbjct:   69 CFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSS 165          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A1X6NUB8 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUB8_PORUM)

HSP 1 Score: 75.5 bits (184), Expect = 3.530e-11
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNG----LFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEM 343
            CFPA A+V  RDG   ++ D+AVGDE+ V  G     +SPV+MFTH+LP     FV     +G  L  +P+H VYA G  V A SV +G  +
Sbjct:  244 CFPADATVERRDGAVVRLVDVAVGDEVRVAPGSGPAAWSPVYMFTHKLPGGAHTFVEMTTAAGAVLTATPSHLVYASGAQVPAGSVAVGDAL 335          
BLAST of Ggra4520.t1 vs. uniprot
Match: R7QIV5 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV5_CHOCR)

HSP 1 Score: 72.8 bits (177), Expect = 9.330e-11
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLPYVLSRFVRFQ-LDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEM 343
            CFPA A+V   DG   +M D+   D++ VG+G  S VF F HR P+ +S FV      S   L +SP HY+Y DG+L TA+SV+ G  +
Sbjct:  131 CFPADATVSRPDGLVVRMEDLQYADKVAVGDGSHSDVFFFGHRSPHPVSEFVSIHHAGSQTPLRLSPGHYLYVDGKLRTARSVRPGDRL 219          
BLAST of Ggra4520.t1 vs. uniprot
Match: A0A5J4YMS1 (Desert hedgehog protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMS1_PORPP)

HSP 1 Score: 68.2 bits (165), Expect = 5.410e-9
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  256 CFPASASVRMRDGGRRKMRDIAVGDEIYVGNG--LFSPVFMFTHRLPYVLSRFVRFQLDSGDNLAVSPNHYVYADGQ 330
            CFPAS +V + +G  + M  + +GD + V     +FS VF F HR P  +S F+RF L SG+ ++VSP HY+Y+  +
Sbjct:  228 CFPASGAVTLENGESKNMALLELGDRVRVATNPDVFSDVFFFGHREPRAVSHFLRFSLASGNQVSVSPRHYIYSQNR 304          
The following BLAST results are available for this feature:
BLAST of Ggra4520.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IX711.810e-1947.37Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKI54.930e-1746.24Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKL04.940e-1746.24DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]
A0A2V3J2J04.100e-1541.49Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A1X6P5E71.120e-1246.24HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IVL12.150e-1243.82Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
R7Q6191.190e-1136.08HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A1X6NUB83.530e-1144.57HintN domain-containing protein n=1 Tax=Porphyra u... [more]
R7QIV59.330e-1143.82HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A5J4YMS15.410e-941.56Desert hedgehog protein A n=1 Tax=Porphyridium pur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 254..347
e-value: 4.5E-8
score: 42.8
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 256..352
e-value: 3.3E-17
score: 65.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..355
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableCDDcd00081Hintcoord: 256..341
e-value: 1.04487E-9
score: 54.1974
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 251..333
e-value: 4.4E-14
score: 52.5
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 256..327
score: 8.838171
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 256..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:818471..819538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4520.t1Ggra4520.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 818471..819538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4520.t1 ID=Ggra4520.t1|Name=Ggra4520.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=356bp
MQTLTILCLLCVSTFTHAWSESLRDANTLSSRIQTRASYPDDITGKWSFA
YSQNSSLCPQNIEHLSWDRYQQGPFRVEHEEILHDGVRCNDTKLGYYGRL
RFYHGTTLSAIFNNLTKKEVDPGQFVVNYTGKYYITDRMLYILNSTGPNI
DARWVADTRREPYLVGYESAHRVCNGKVLFPRGSTAFIIKPSEEDITIPR
IDFTFEADTKWLIMVPLYKGISCVYRFGDGDVEHDSTQFEGSSENELEAS
RRGKECFPASASVRMRDGGRRKMRDIAVGDEIYVGNGLFSPVFMFTHRLP
YVLSRFVRFQLDSGDNLAVSPNHYVYADGQLVTAQSVKLGQEMVLGNGSL
LSFSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf