Ggra4504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4504.t1
Unique NameGgra4504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1051
Homology
BLAST of Ggra4504.t1 vs. uniprot
Match: A0A2V3J404 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J404_9FLOR)

HSP 1 Score: 903 bits (2333), Expect = 2.600e-312
Identity = 544/1073 (50.70%), Postives = 688/1073 (64.12%), Query Frame = 0
Query:    1 MTEKATPASLSFLCATTDLTPEDCKPIKFLETRSRPRSRPVQRTVFQIGSEWDSSATESVLDAFHLSMPAEIGPKSPAEQSLKFSRASGSVEVDAEMADIFAEPTSNSCPDKAALHKDSTLPLVQCCICNRPVLFTRAVSHMKSCRTANDSSGFIEDHITQNPASVNDDEKNSLICAPYIDSKQE-SRAKDSSQSSAPPPIR-GAISHREKECMRASLKLRKASFPRDEDDWETSLASIVEV-IPRSTTYRRRRVLVPHVPDTQRKRLQSDKKAISAASVAGLYPPTNTRQSVGVASKPRDPLREVARKWSARTPWAKLMHMALPLRTKLTPKKRKFSRAMGTVSLETDESSSHVANINGNMKNSKQNESLDRYQSGGQQQP-PSLIGALLWLRGHATREIFGTPLQHMDIPSSLHPRISTLFHGQTLPSRGGIFETDPRPVSTVRLPASITRKSKALALAVPVSK----APSIDKKQRTVPPKAASTQANGAMPPPKKPKVPK-PQ-PILSNGHAFPTRTPHQAQAAARNNANRSNVRAQPPLNPTHITPELQRQMLQQRHMSKVAAKTTINGAVSSAAIAASNYANMHPASQRNMYLNPMPAAMAGMHPRTAGLAAHPSAHLTTPMSATPNQGTKSTGSRGSKGRVPVGHQVAGASPGMRVTGGIPIRNQSPSQGSSRSADRSSRMRIPAEVAAAAAARQYDAGLLASAAQQIQRGQVPHPAMYNN---QTPIDFQHMLAQIA-GANHHVRDDLSGLGNSVHPGVTSDVASVARRNLQGLSPLTAVKAGGSVQGTPQVIQSRDPSLLKPNTTPRMPVQKNDQNIGHRSKELEQQLRQGAGFMLDNSSAAAKLEAALGG-YGKRPNPQQIGVPNMSQGLYDAAIAAAASPQMGPNAIAMKNQ---AFLRMAPNSLAVALTNPAMFQNMRDMPNL----VMGMPGQSHGNNMVNFMPTTAPTTGLQNPALSNPIAPNVTGKVVGQGQSMNMLSSNQILQQMFGAKAMGANLSNTVHQQQFVEANAQLNNLIPDMRQVGVPPTAQ-DLAPGDKASILNEIDKVFEGQDAQDSGF 1050
            M +K T AS++ L A TDL  EDCKP+   +  +  ++RPVQRTVFQIGSEW S +T++VLDAFHLS+PAEI   SP ++SL FSRASGSVEVDAEMAD FAE       DKAA  KD+ LP++QC  CNRP++FTRA+SH  SC+ +N  +  + D +      V++DE+  LI APY    QE ++ ++S+ S+     R  + SHREKE +RASLKLRKASFPR+EDDWET+L+ I E  IPR +  RR           QRKR   +KKAISAAS AGLYP ++ RQS G  SKP DPLRE ARK +A  PWAKLM +ALPLR K TP KRKF  A+ T+SL+TDESSSH+AN NGN+K +K +++++RY  G QQQ  PSLIGALLWLRGHATRE+ GT +QHMDIP SLH R+ ++FHGQT  +R G FETDPR  S ++LP  +  K K+             A ++D +Q+  P K+A+ QANG + P KKP+V K PQ P+  N   F T    Q QA ARN   R N R    +NP  I P L RQ+LQ R + +VAA   IN  V SAA+AA+NYA MH +SQ+ +Y+ P P  +AG+HPRTAG       HL  P+   P QGTKSTGSRGSK RV   HQV+ A                                                GLLASA QQI RG + HP +YN    +    F H+LAQIA G N  ++DD S +   V   + +DV+   RR +QG+SP+  VK  GSVQ TPQV Q  DP+LLK N TPRM V+K+DQ++ HRS ELEQQLR+   FMLD +  AAK EAAL   YG++ N  Q+G+PNMSQGLYD  IAA AS Q+ PNAIAMK Q   AFLRMA +++A A  NP M QNMRD+P +    ++G+PGQS  N+++NFMP+ AP  GLQN ALSNP+A NV G ++GQGQ+++MLS N ILQQ FG K  G NL+N+VH QQ V+ANAQLN++I   R V V P     L+P  +  + + I  + E +D  D+ F
Sbjct:    1 MVDKITLASITNLSACTDLNAEDCKPLSLPKKHTPQKTRPVQRTVFQIGSEWASPSTDAVLDAFHLSIPAEIPQNSPEDKSLIFSRASGSVEVDAEMADFFAESF-----DKAATQKDTRLPILQCNSCNRPMIFTRALSHTASCQRSNIGAASLHDRVPSGTTPVSEDEQQELIYAPYSSLTQEPTKGRESTSSARTNAARFSSTSHREKESVRASLKLRKASFPREEDDWETALSPIAEPHIPRCSISRRXXXXXXXXXXXQRKRHNIEKKAISAASNAGLYPSSSPRQSNGNISKPPDPLRETARKMAAHAPWAKLMQIALPLRPKQTPMKRKFPLAVNTISLDTDESSSHIANANGNVKATKASDNIERYPGGNQQQQSPSLIGALLWLRGHATREVSGTIMQHMDIPPSLHGRVPSVFHGQTFSTRIGPFETDPRLPSIIKLPLGVATKPKSTGXXXXXXXXXXXATAVDNRQKPAPQKSAAPQANGGLQPRKKPRVSKQPQNPVGGNPPTFVTPA-QQGQALARNGTARPNARTPTSMNPVQIPPVLSRQILQHRQLPQVAANAAINSVVGSAALAATNYAKMHQSSQKKVYITPAPTQLAGIHPRTAGAPGIQPTHLPPPVGPGPTQGTKSTGSRGSKPRVGAAHQVSNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXGLLASAGQQIPRGHLRHP-VYNTAPGELHHQFHHLLAQIAQGGNQLLQDDASNMARCVPTPIQTDVSQANRRTMQGMSPMNRVKPSGSVQSTPQVPQVNDPALLKANLTPRMQVRKDDQSMSHRSAELEQQLRRDHNFMLDGAGVAAKYEAALNSVYGRKGNNPQLGIPNMSQGLYDPTIAATASNQLAPNAIAMKRQQELAFLRMAQSTMAGAQANPNMIQNMRDLPGMSRLPILGIPGQSPNNSVMNFMPSAAPNAGLQNSALSNPMAANVAGNILGQGQNLSMLSGNPILQQAFGTKTTGMNLNNSVHPQQMVDANAQLNSIISGGRGVRVAPNPNPQLSPQAQLELHDLIRGITEEKDLHDASF 1062          
The following BLAST results are available for this feature:
BLAST of Ggra4504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4042.600e-31250.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 606..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..633
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..500

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:705099..708251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4504.t1Ggra4504.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 705099..708251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4504.t1 ID=Ggra4504.t1|Name=Ggra4504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1051bp
MTEKATPASLSFLCATTDLTPEDCKPIKFLETRSRPRSRPVQRTVFQIGS
EWDSSATESVLDAFHLSMPAEIGPKSPAEQSLKFSRASGSVEVDAEMADI
FAEPTSNSCPDKAALHKDSTLPLVQCCICNRPVLFTRAVSHMKSCRTAND
SSGFIEDHITQNPASVNDDEKNSLICAPYIDSKQESRAKDSSQSSAPPPI
RGAISHREKECMRASLKLRKASFPRDEDDWETSLASIVEVIPRSTTYRRR
RVLVPHVPDTQRKRLQSDKKAISAASVAGLYPPTNTRQSVGVASKPRDPL
REVARKWSARTPWAKLMHMALPLRTKLTPKKRKFSRAMGTVSLETDESSS
HVANINGNMKNSKQNESLDRYQSGGQQQPPSLIGALLWLRGHATREIFGT
PLQHMDIPSSLHPRISTLFHGQTLPSRGGIFETDPRPVSTVRLPASITRK
SKALALAVPVSKAPSIDKKQRTVPPKAASTQANGAMPPPKKPKVPKPQPI
LSNGHAFPTRTPHQAQAAARNNANRSNVRAQPPLNPTHITPELQRQMLQQ
RHMSKVAAKTTINGAVSSAAIAASNYANMHPASQRNMYLNPMPAAMAGMH
PRTAGLAAHPSAHLTTPMSATPNQGTKSTGSRGSKGRVPVGHQVAGASPG
MRVTGGIPIRNQSPSQGSSRSADRSSRMRIPAEVAAAAAARQYDAGLLAS
AAQQIQRGQVPHPAMYNNQTPIDFQHMLAQIAGANHHVRDDLSGLGNSVH
PGVTSDVASVARRNLQGLSPLTAVKAGGSVQGTPQVIQSRDPSLLKPNTT
PRMPVQKNDQNIGHRSKELEQQLRQGAGFMLDNSSAAAKLEAALGGYGKR
PNPQQIGVPNMSQGLYDAAIAAAASPQMGPNAIAMKNQAFLRMAPNSLAV
ALTNPAMFQNMRDMPNLVMGMPGQSHGNNMVNFMPTTAPTTGLQNPALSN
PIAPNVTGKVVGQGQSMNMLSSNQILQQMFGAKAMGANLSNTVHQQQFVE
ANAQLNNLIPDMRQVGVPPTAQDLAPGDKASILNEIDKVFEGQDAQDSGF
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