Ggra4487.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4487.t1
Unique NameGgra4487.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1280
Homology
BLAST of Ggra4487.t1 vs. uniprot
Match: A0A2V3IQG1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG1_9FLOR)

HSP 1 Score: 183 bits (464), Expect = 7.810e-49
Identity = 101/207 (48.79%), Postives = 136/207 (65.70%), Query Frame = 0
Query:   11 MAAPAVLPANSFPHAEPAVSAQTAKTSTCCASIRGAPGRRFSSAPNTVAQGEPIVNHLRSFLEAAAVK----PPPENELPQFTLGMHLKDGVARRLEWKALKAEISRAEAVTAKTKSSLSARARQRYLLDLRRSVSNAIYGLLRDERCEDRDMRSYVTNILVWADPQNARKAIVKEAVADYVREVRSKPEDGYRYPVIVLATEKAGF 213
            MAA   LP  + P   P+   QT  ++T   +++    RRF  AP+   Q  PIV +LRS LE A VK    PP   + P F LGM +KDGVA+RLEWKAL  EI+RA+AVTA T SS+S+++RQ++L DL  S++N++Y LL+DE CED D R+YV ++ VW D QNARKAI+ E V+ + R  +S  +  YR+PV+ LAT KA F
Sbjct:    1 MAASVRLPTRAAPVNPPSKINQTPPSTTASRTLQPRSARRFIPAPSPNLQ-PPIVQYLRSLLETATVKSKSIPPVPLDHPHFALGMQVKDGVAKRLEWKALLTEIARADAVTANTNSSISSKSRQQFLFDLSPSIANSVYDLLKDESCEDEDARTYVVDVFVWPDAQNARKAIINEVVSTFRRMPKSDVQQSYRFPVVTLATGKAAF 206          
BLAST of Ggra4487.t1 vs. uniprot
Match: A0A2V3J098 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J098_9FLOR)

HSP 1 Score: 171 bits (432), Expect = 5.550e-44
Identity = 87/192 (45.31%), Postives = 123/192 (64.06%), Query Frame = 0
Query:  124 SLSARARQRYLLDLRRSVSNAIYGLLRDERCEDRDMRSYVTNILVWADPQNARKAIVKEAVADYVREVRSKPEDGYRYPVIVLATEKAGFQVDQEPCETATTRSTGDVNRDHIQFLEAWREAVTGEAEVLTVVGDTAGSMRGSLEAVLEGSDHHWASTPIIIVMYASYDSAITANMSSIRRLCDANNIKLCV 315
            S S + RQ++L DL  S +N+I+ L +DE CE  D R+YVT++LV +D Q+ARKAI  + V+ + R  +S  +  YRYPV++LATEKA F    +        +  +V     QFL  WR AV  +A VL + G+ +  ++ SLEAVLE     W STP+ +V+Y S+DS ITAN+SSIRR+C++ NIK CV
Sbjct:   69 STSPKTRQQFLFDLSASTANSIHDLPKDESCEGEDARTYVTDLLVCSDAQSARKAIFNDVVSTFRRMHKSDVQQSYRYPVVILATEKAAFFEPYQVRGDHEQTNAQNVYGAQAQFLALWRGAVAHDANVLALAGENSDRVKASLEAVLEADGLQWISTPVSLVLYVSFDSVITANLSSIRRICESQNIKFCV 260          
BLAST of Ggra4487.t1 vs. uniprot
Match: A0A2V3IP27 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP27_9FLOR)

HSP 1 Score: 127 bits (320), Expect = 2.220e-30
Identity = 60/122 (49.18%), Postives = 91/122 (74.59%), Query Frame = 0
Query:   92 MHLKDGVARRLEWKALKAEISRAEAVTAKTKSSLSARARQRYLLDLRRSVSNAIYGLLRDERCEDRDMRSYVTNILVWADPQNARKAIVKEAVADYVREVRSKPEDGYRYPVIVLATEKAGF 213
            MH+K+GVA+RLEWKAL AE +R+++VTA T SS+S + +Q++L  L  S +N+++ LL+DE CED D R+YV ++L W++ QNARKAI  + V+ + R  +   +  YR+PV++L+TEKA F
Sbjct:    1 MHVKEGVAKRLEWKALLAEAARSDSVTANTNSSISPKEQQQFLFYLSASNANSVHDLLKDEICEDEDARTYVIDVLAWSEAQNARKAIFSDVVSPFRRVHKPDVQQSYRFPVVILSTEKAAF 122          
BLAST of Ggra4487.t1 vs. uniprot
Match: A0A2V3IUD6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUD6_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 5.630e-30
Identity = 59/122 (48.36%), Postives = 90/122 (73.77%), Query Frame = 0
Query:   92 MHLKDGVARRLEWKALKAEISRAEAVTAKTKSSLSARARQRYLLDLRRSVSNAIYGLLRDERCEDRDMRSYVTNILVWADPQNARKAIVKEAVADYVREVRSKPEDGYRYPVIVLATEKAGF 213
            MH+KD V++RLEWKAL AE +R++++TA T SS+S + +Q++L DL  S +N+I+ LL+DE CE+ D R+YV ++LVW++ QNARKAI  + V+ + R  +S  +  YR+PV +L+TE   F
Sbjct:    1 MHVKDAVSKRLEWKALLAEAARSDSITANTNSSISPKEQQQFLFDLSASNANSIHDLLKDESCEEEDARTYVIDLLVWSEAQNARKAIFNDVVSPFRRVHKSDVQQSYRFPVAILSTENGAF 122          
The following BLAST results are available for this feature:
BLAST of Ggra4487.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQG17.810e-4948.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0985.550e-4445.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP272.220e-3049.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUD65.630e-3048.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 227..351
e-value: 3.5E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..959
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..1245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1147..1172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 864..885
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 973..991
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1260..1279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1051..1065
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 826..850
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..770
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1189..1233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1066..1146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:624001..627933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4487.t1Ggra4487.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 624001..627933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4487.t1 ID=Ggra4487.t1|Name=Ggra4487.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1280bp
MPRFGLRAIDMAAPAVLPANSFPHAEPAVSAQTAKTSTCCASIRGAPGRR
FSSAPNTVAQGEPIVNHLRSFLEAAAVKPPPENELPQFTLGMHLKDGVAR
RLEWKALKAEISRAEAVTAKTKSSLSARARQRYLLDLRRSVSNAIYGLLR
DERCEDRDMRSYVTNILVWADPQNARKAIVKEAVADYVREVRSKPEDGYR
YPVIVLATEKAGFQVDQEPCETATTRSTGDVNRDHIQFLEAWREAVTGEA
EVLTVVGDTAGSMRGSLEAVLEGSDHHWASTPIIIVMYASYDSAITANMS
SIRRLCDANNIKLCVEGPGLAFIAQAARPSDPNECLQHADVLLTNPGSWF
GFEECAFTSIHCTHSSSSCSTQSYGHDSKIASITSDIQREDQRQGKAVAY
VTKLWTVISQIGVPRIREKVDAVTHTAEALIYHLRDCQSLTTSYEGVGCI
VRLSYELSTGERGFSKIEEAEILSAINRSLYRYVSTEAKELQVFLVMVDN
ISVLQFSPLRMLTARTFWVPEGDQVRKFTNALRQRAEFYRLCRTGALVFM
ERMALCSDIELLEDDEVKDDVLHWYGAFRVVPDEWQGTWEDSSSGRHVTT
TLTKMFVSELSDSFAGLVMRSPSLKQLLESCSFQGSTKSTRITGNSLRKK
AANPLEYIFRRGSCANHMSLEQSVTDLPFSFYIHYDDATFNAPFVSVEPK
RAHPVNRAYRHACTAAEIVVTVLQVVLRKYRSKDVVASPSHGSVYNPVES
ERTPVESFPVSKPETSQEEQTQVCTVDGSSLEEPEISSTDVNRSDDDGFV
SASNTLCTESPVTREANPSLYQRDTNSYRNRDKYVNAKPHNTEQGHLRDC
SKIPGEGASNDGVSIIETPPTSSSATHTQFGQGVQSRIPWMDLVTTEHLS
SDADSEGSDGEYTDEEDDSLTEEDGSLTEDGSDYQDTDSSDQESDEGSSE
DDSSENESSESSADEGYSGNEESDGESETSSSSSSSSDIESDHENSTLEA
MGESKTEMRPASELVKGNIKRSAWLSSWFGAKNVQGPSPIIAANVHDVSQ
HVARSDAEMNSSRRNTSHRRVSPNSKSPPTSCSSRETSESESVVSSETIQ
SSSTEDSNLSSSNISEQHQNPPGKETNKSSKTSKSYRQWGWWKQKTRTNS
ESDEASNSSEDQRPRRPDDDEDTSSSYDDDESAFPGAFSIASSEVSSTAS
QESVSESNSETNEGSSHSSSTSSNSSIESETQRSRTRGLSDNKPRRPWFP
YFGYYGFSSVGGSGRKEKKSSSSNRRRRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major