Ggra4404.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra4404.t1
Unique Name	Ggra4404.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	187

Homology

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BLAST of Ggra4404.t1 vs. uniprot
Match: A0A2V3ISD9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISD9_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 2.360e-35
Identity = 81/146 (55.48%), Postives = 93/146 (63.70%), Query Frame = 0

Query:   41 QPRSSPNVLQGLATLHPRLRQGAVEAVGDVDAHAHMGEQPKSSPAVGVAPVVDEPDDGDSHHAVEKMNTPPRHHQLQQRQPQPPXXXXXXXXXXXXXXQQQQQFASAFESLKDTPAASLRLVSPNARESLIARAALIDAMPDPPPK 186
            Q RSSP+VLQGLATLHPRLR+ +VE + D +A A MGE         V   +++ D+ D H A+E++N PP   Q  Q Q   P               QQQQF S  ESLKDTPAASLRLVSPNARESLI RAALIDAMPD PPK
Sbjct:   10 QQRSSPSVLQGLATLHPRLRKASVETLHDANADAAMGE---------VVSGIEDHDNADWHSALEEVNMPPEQQQPAQPQXXXPSA-------------QQQQFTSLLESLKDTPAASLRLVSPNARESLIVRAALIDAMPDSPPK 133

[Close]

BLAST of Ggra4404.t1 vs. uniprot
Match: A0A2V3IGL3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGL3_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 3.680e-10
Identity = 31/42 (73.81%), Postives = 38/42 (90.48%), Query Frame = 0

Query:  143 QFASAFESLKDTPAASLRLVSPNARESLIARAALIDAMPDPP 184
            +FA+ F+ + DTPAASLRLVSPNA++SLI RAALID+MPDPP
Sbjct:   96 EFAAVFDKIADTPAASLRLVSPNAKQSLIERAALIDSMPDPP 137

The following BLAST results are available for this feature:

BLAST of Ggra4404.t1 vs. uniprot

BLAST of Ggra4404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ISD9	2.360e-35	55.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IGL3	3.680e-10	73.81	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000898_pilon	contig	tig00000898_pilon:329628..330188 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra4404.t1	Ggra4404.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000898_pilon 329628..330188 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra4404.t1 ID=Ggra4404.t1|Name=Ggra4404.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=187bp
MSLAQQLCEQRHPSRSGGATFFRQALRLRSPSGRRASWRAQPRSSPNVLQ
GLATLHPRLRQGAVEAVGDVDAHAHMGEQPKSSPAVGVAPVVDEPDDGDS
HHAVEKMNTPPRHHQLQQRQPQPPPQPPPQPPPQPPPTQQQQQFASAFES
LKDTPAASLRLVSPNARESLIARAALIDAMPDPPPK*