Ggra4322.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4322.t1
Unique NameGgra4322.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length432
Homology
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BLAST of Ggra4322.t1 vs. uniprot
Match: A0A2V3IK76 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK76_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 1.430e-30
Identity = 129/447 (28.86%), Postives = 225/447 (50.34%), Query Frame = 0 
Query:    8 NLFQTIPPLYPSSPFPSIDYVTKPFADILDAIALVMVLWTTAAIVNRLMTIPFGRNTRTVLLQRMFDNLTNLRFPTSHCFTAQARRN-HWLFSFSSILFRLIATSFFLVLGGAEVAVIYSQTFQQKARSLDELNLKGI-----TFHIPQNGEDLTGYFRGCVPLLSGEHTSTSLVFMLCMYQEF-------------ANEETAAELSGFEFQFTSSDPRFFDIYEAVST-IDLRSRISVEIRDPRRSALYFANMSRLGFSMTSSKLEWLSRKLKENCT---SCVVSAEYVSPTFSVLRSSNNPVVDRENKVDMAIRFSDYVLSMIRLSNRKLKSSDFLSEYAQD-EKSELG--LLEVSVGRVKRVSGLTLWIVLAALAVINFVSSRLTYDIDDDVNGIVAAALAYPPETSLLDCENTRFSI--VDTHLPS-IQREKGSETEQRTSKR 425
             L Q I PL P + FPS DYV KP+ADI+DAI ++++ +  AAI++++M++  G  ++++ +   F+ L  L       F  Q       +  FS+ L RL A +FF++    E  +I+SQT   + RS+ +L ++ +        IP +    T     C PL+S E +ST++   LC+  +              A     + +   + QF  S+P  F I +  ST   L    S+++ D   S +  AN+++LGF +++++   L    + +C    S + +A  V  +FS +  S+   + R +K+  ++ F+    S+I+LSNR  +SSDF+ +   D   SE+   +LE ++ RVKR+SG+  WI+ + L ++N + + +    D+ VN +   A   PP+  L +  N    I  V+ H+ S    E G+    +TS R
Sbjct:   11 RLTQRITPLNPHTFFPSFDYVGKPYADIVDAIVIILMQFIIAAILSKMMSLLSGGPSKSLSVISYFNRLVGLSLSA---FNGQREYQVPRVRFFSNPLPRLTAMAFFVLYVTIEALLIFSQTSAPRVRSIPDLKIRSLGLMDLNLSIPSSFPVFT-----CTPLVSTESSSTNVRLALCVRHQTVSYFNVSYTPVYAAQPRDNSFIGSADVQFDWSNPSEFRIIDRHSTGQQLYISFSIQLSDSSLSKISRANLTKLGFQISATQKSKLQELFQLSCRCKLSTLSTASTVKFSFSNITLSHPTELSRFHKL-ASLSFN----SIIQLSNRTHRSSDFIPDGNPDITTSEVQRLVLEAAIERVKRLSGINTWILTSGLLLLNLILNCVVGSHDERVNAVKTVA-DLPPDLDLHNTANVLLVITEVEAHVSSPFSEEIGALGLPKTSLR 443
The following BLAST results are available for this feature:
BLAST of Ggra4322.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK761.430e-3028.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 365..431
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 346..364
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000022_piloncontigtig00000022_pilon:650926..652221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4322.t1Ggra4322.t1Gracilaria gracilis GNS1m malemRNAtig00000022_pilon 650926..652221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4322.t1 ID=Ggra4322.t1|Name=Ggra4322.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=432bp
MRQHAAENLFQTIPPLYPSSPFPSIDYVTKPFADILDAIALVMVLWTTAA
IVNRLMTIPFGRNTRTVLLQRMFDNLTNLRFPTSHCFTAQARRNHWLFSF
SSILFRLIATSFFLVLGGAEVAVIYSQTFQQKARSLDELNLKGITFHIPQ
NGEDLTGYFRGCVPLLSGEHTSTSLVFMLCMYQEFANEETAAELSGFEFQ
FTSSDPRFFDIYEAVSTIDLRSRISVEIRDPRRSALYFANMSRLGFSMTS
SKLEWLSRKLKENCTSCVVSAEYVSPTFSVLRSSNNPVVDRENKVDMAIR
FSDYVLSMIRLSNRKLKSSDFLSEYAQDEKSELGLLEVSVGRVKRVSGLT
LWIVLAALAVINFVSSRLTYDIDDDVNGIVAAALAYPPETSLLDCENTRF
SIVDTHLPSIQREKGSETEQRTSKRGMLIGC*
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