Ggra4230.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4230.t1
Unique NameGgra4230.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length171
Homology
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BLAST of Ggra4230.t1 vs. uniprot
Match: A0A2V3IHB3 (SRR1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB3_9FLOR)

HSP 1 Score: 134 bits (337), Expect = 1.130e-35
Identity = 73/166 (43.98%), Postives = 101/166 (60.84%), Query Frame = 0 
Query:    1 MFCLGLGSFSPWNNATHQLACACLLRELLKAGE--CFVGDPCMNEADELVLQQLNMTRREW---QPTEEFKLANDMLLFMFLPHCTREVNDQVLRTLHGCNALGNAVFLANQFSLY-YEELQSRGAGQSDFIKELYENGRLEERVCACSKESSSETAFNDLCVTRV 160
            ++CLGLGSF   +NA HQLACA  ++E+       CF+G+PC+  +DELVL  +  +R+EW   + T E K+ ND  + MFLPHC  ++N+ V++ +         V LAN  S Y Y  L  +     + I +L+  G+L ER CA +K SSSETAFNDLCVT V
Sbjct:   92 VYCLGLGSFESSHNARHQLACALSIQEVFNVTNEGCFIGEPCLTPSDELVLHDIGWSRKEWLMHEATWEAKMKNDGCVVMFLPHCPYDLNELVMKWICKNGFAERTVLLANDLSKYCYVVLTRKQHEIKNKINKLHAYGKLHERKCAQAKLSSSETAFNDLCVTVV 257
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BLAST of Ggra4230.t1 vs. uniprot
Match: A0A1V9YQ96 (SRR1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQ96_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.370e-8
Identity = 49/162 (30.25%), Postives = 71/162 (43.83%), Query Frame = 0 
Query:    5 GLGSFS--PWNNATHQLACACLLRELLK----AGECFVGDPCMNEADELVLQQLNMTRREWQPTEEF--KLANDMLLFMFLPHCTREVNDQVLRTLHGCNALGNAVFLANQFSLYYEELQSRGAGQSDFIKELYENGRLEERVCACSKESSS----ETAFND 154
            G+GSF+  P  NA +QLAC  LL E  K        ++ DP M E D +V + + +   +  PT E   + A    LF F+PHC +++   VL    G + L     L N F  Y + +    A Q+     L      E  + +C K        + AFND
Sbjct:   95 GVGSFASGPCGNAVYQLACTALLCEYFKHRARLSHAYIYDPVMTEDDNVVAEAVGL---QVLPTNERGQRRATTRTLF-FMPHCGKQLYQNVLLANWGQDGLAKIAVLGNSFEAYDDRVVQASARQASIFSALVPY-TTEVSLGSCEKSDLDHFQYDAAFND 251
The following BLAST results are available for this feature:
BLAST of Ggra4230.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHB31.130e-3543.98SRR1 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A1V9YQ963.370e-830.25SRR1 domain-containing protein n=1 Tax=Achlya hypo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012942SRR1-like domainPFAMPF07985SRR1coord: 2..52
e-value: 1.8E-13
score: 50.3
IPR040044SRR1-like proteinPANTHERPTHR28626SRR1-LIKE PROTEINcoord: 1..155
NoneNo IPR availablePANTHERPTHR28626:SF3SRR1-LIKE PROTEINcoord: 1..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:304395..304907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4230.t1Ggra4230.t1Gracilaria gracilis GNS1m malemRNAtig00000880_pilon 304395..304907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4230.t1 ID=Ggra4230.t1|Name=Ggra4230.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=171bp
MFCLGLGSFSPWNNATHQLACACLLRELLKAGECFVGDPCMNEADELVLQ
QLNMTRREWQPTEEFKLANDMLLFMFLPHCTREVNDQVLRTLHGCNALGN
AVFLANQFSLYYEELQSRGAGQSDFIKELYENGRLEERVCACSKESSSET
AFNDLCVTRVLRDGNAQGWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012942SRR1-like
IPR040044SRR1L