Ggra4215.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4215.t1
Unique NameGgra4215.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length166
Homology
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A7S0ZCL9 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCL9_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 1.040e-33
Identity = 81/181 (44.75%), Postives = 117/181 (64.64%), Query Frame = 0
Query:    2 DFGITYSEVDLKD-GEVNFDGIGDKMNDRTKVVFIQK---YN-------SDVARIVKLAKALK--------SGVVVVDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGVESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGY 163
            DFG++Y E+ L + G V+F+GI + ++  TKVVF+Q+   Y+        D+ARIV + +  +        S VV VDNC+ EL E  E TD SIGAD+AAGSLIK  GG  +S SGGY+VG+++LV+ AR R+ A GV   A+LG+ +++ Q LF+AP    +++K + LIA+ M  LGY
Sbjct:   63 DFGVSYREIALTEHGNVDFNGIRNGIHKDTKVVFVQRSCGYSWRASIPLHDIARIVSIVRECELELNLKPNSIVVFVDNCYGELVEDVEPTDVSIGADVAAGSLIKNCGGTIVS-SGGYVVGKRELVRLARNRMSAPGVGGAAALGMNRSIIQGLFLAPQMVGEAMKGAVLIAKVMSALGY 242          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A1M6G9Q6 (Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Thermoclostridium caenicola TaxID=659425 RepID=A0A1M6G9Q6_9FIRM)

HSP 1 Score: 130 bits (327), Expect = 5.130e-33
Identity = 74/177 (41.81%), Postives = 114/177 (64.41%), Query Frame = 0
Query:    2 DFGITYSEVDLKDGEVNFDGIGDKMNDRTKVVFIQKYNS----------DVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYDS 165
            DFGI+Y +VDLKDGE++F+ I + +N+RT++VF+Q+              +A++V+  KA++  +++ VDNC+ E  E  E TD  +G D+ AGSLIK  GGG + PSGGYIVG  + V++  +R+   G+  E GA+LG  + + Q  FMAP   A+SLK +   AE M +LG+++
Sbjct:  144 DFGISYRQVDLKDGEIDFERITEAINERTRLVFLQRSRGYAFRPPVTIEQIAKVVETVKAVRKDILIMVDNCYGEFVEPLEPTD--VGVDVMAGSLIKNPGGG-LVPSGGYIVGTHEAVEKISYRMTLPGIGREVGATLGQNRLMFQGFFMAPHIVAESLKGAVFTAEIMRRLGFET 317          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A1H3ZNG5 (Cystathionine beta-lyase family protein involved in aluminum resistance n=2 Tax=Eubacterium TaxID=1730 RepID=A0A1H3ZNG5_9FIRM)

HSP 1 Score: 129 bits (323), Expect = 2.000e-32
Identity = 77/175 (44.00%), Postives = 112/175 (64.00%), Query Frame = 0
Query:    2 DFGITYSEVDLKDGEVNFDGIGDKMNDRTKVVFIQKYN----------SDVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGY 163
            DFGI+Y +VDLKDG+V++DGI   + D+TK+V++Q+            +D+   +  AK +K  VV  VDNC+ E  +  E    S+GAD+ AGSLIK  GGG I+P+GGY+VG+K+ V  A  RL A GV  E+GA+  + +TL Q  F+AP   AQ+L+S+ L+A    +LG+
Sbjct:  145 DFGISYKQVDLKDGQVDYDGIRAAITDKTKMVYLQRSTGYSWRKALTLADIQAAIAFAKEIKPDVVAFVDNCYGEFLDDAEPV--SVGADLMAGSLIKNPGGG-IAPTGGYVVGKKEYVYMAACRLAAPGVAKETGATGTINRTLLQGFFLAPTVVAQALQSAVLMAAVYEKLGF 316          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A2K2FPP9 (Uncharacterized protein n=2 Tax=Pseudoclostridium thermosuccinogenes TaxID=84032 RepID=A0A2K2FPP9_9FIRM)

HSP 1 Score: 129 bits (323), Expect = 2.000e-32
Identity = 80/178 (44.94%), Postives = 116/178 (65.17%), Query Frame = 0
Query:    2 DFGITYSEVDL-KDGEVNFDGIGDKMNDRTKVVFIQKYNS----------DVARIVKLAKALKS-GVVVVDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYDS 165
            +FGI+Y++VDL  DG+++FDGI   + D+TK+V IQ+             D+AR V L K++K   VV+VDNC+ E  E  E T+   GADM AGSLIK IGGG ++P+GGYIVG+ + V++A +RL   G+  E G++LG  + + Q LFMAP   A+SLK +   A  M +LG+++
Sbjct:  145 EFGISYNQVDLLPDGKLDFDGIRRAIGDKTKLVLIQRSRGYAWRPAIMIDDIARAVSLIKSIKKDAVVLVDNCYGEFVEDREPTE--AGADMVAGSLIKNIGGG-LAPTGGYIVGKAECVEKAAYRLTTPGLGKEVGSTLGNNRLMFQGLFMAPHVVAESLKGAVYCAAIMNRLGFET 319          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A7X7X3I0 (Uncharacterized protein n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7X3I0_9CLOT)

HSP 1 Score: 126 bits (317), Expect = 1.430e-31
Identity = 72/177 (40.68%), Postives = 112/177 (63.28%), Query Frame = 0
Query:    2 DFGITYSEVDLKDGEVNFDGIGDKMNDRTKVVFIQKYNS----------DVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYDS 165
            +FGITY +++LK+GE++F  I   +N+RT++VF+Q+              +AR+V+  KA++  +++ VDNC+ E  E  E T  S+GAD+ AGSLIK  GGG I PSGGYI G +  V++  +R+   G+  E GA+LG  + + Q  F+AP   A+SLK +   AE M +LG+++
Sbjct:  144 EFGITYKQIELKNGEIDFKAITGAINERTRMVFLQRSRGYAFRPPVTTEQIARVVETVKAIRKDILIMVDNCYGEFVETLEPT--SVGADVMAGSLIKNPGGG-IVPSGGYIAGTRDAVEKISYRMTLPGIGREVGATLGQNRLMFQGFFLAPHIVAESLKGAVFTAEIMRRLGFET 317          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A097ARM3 (Aluminum resistance family protein n=1 Tax=Thermoanaerobacter kivui TaxID=2325 RepID=A0A097ARM3_THEKI)

HSP 1 Score: 125 bits (315), Expect = 2.830e-31
Identity = 73/177 (41.24%), Postives = 112/177 (63.28%), Query Frame = 0
Query:    2 DFGITYSEVDL-KDGEVNFDGIGDKMNDRTKVVFIQKYNS----------DVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYD 164
            D+G+ Y EV L  DGE++ + +   ++ +TK+V IQ+             D+ + ++  K++K  V+V VDNC+ E  E  E  +   GAD+ AGSLIK IGGG I+P+GGY+VG+K+LV+ A +RL+A G+  E G SLGL + + Q LF AP    Q+LK + L+++ M +LGY+
Sbjct:  143 DYGVIYEEVPLINDGEIDIENVKKAVSQKTKMVLIQRSKGYDYRKSLKIEDIKKTIREIKSVKEDVIVFVDNCYGEFTETKEPIE--AGADIVAGSLIKNIGGG-IAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLGLNRLILQGLFFAPQVVGQALKGAVLLSKVMAELGYE 316          
BLAST of Ggra4215.t1 vs. uniprot
Match: R6V9Z9 (Aluminum resistance protein n=7 Tax=Eubacteriales TaxID=186802 RepID=R6V9Z9_9FIRM)

HSP 1 Score: 124 bits (311), Expect = 1.080e-30
Identity = 76/176 (43.18%), Postives = 105/176 (59.66%), Query Frame = 0
Query:    2 DFGITYSEVDLK-DGEVNFDGIGDKMNDRTKVVFIQKYNSDVAR----------IVKLAKALKSGVV-VVDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGY 163
            +FG+TY +VDLK DG  +FDGI   +ND+TK+V IQ+      R          ++   K+++  V+ +VDNC+ E  E  E T   +GADM  GSLIK  GGG ++P GGYIVGRK L+    +RL A G+  E GA+LGL ++  Q  FMAPC  A +LK +   A    +LG+
Sbjct:  143 EFGVTYRQVDLKEDGSFDFDGIRAALNDKTKLVTIQRSKGYATRPTLSVERIGELIAFIKSIRPDVICMVDNCYGEFVERIEPTQ--VGADMCVGSLIKNPGGG-LAPIGGYIVGRKDLIDMCAYRLTAPGLGKEVGATLGLNRSFFQGFFMAPCVAASALKGAIFAANVYERLGF 315          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A2Z2K943 (Uncharacterized protein n=1 Tax=Paenibacillus donghaensis TaxID=414771 RepID=A0A2Z2K943_9BACL)

HSP 1 Score: 124 bits (310), Expect = 1.260e-30
Identity = 81/176 (46.02%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    2 DFGITYSEVDLK-DGEVNFDGIGDKMNDRTKVVFIQKYN----------SDVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGY 163
            DFGITY+EV L  DG V++D +   +ND+TKV+ IQ+            +++ ++V+  KAL  GV+V VDNC+ E  E  E T   +GAD+ AGSLIK  GGG I+ +GGYI GR++LV+QA +RL A G+  E GA LG T+ L Q LFMAP    Q+LK S   A    + G+
Sbjct:  134 DFGITYAEVALTADGAVDWDEVQLAVNDKTKVIGIQRSRGYDWRSSFTVAEIGQMVERIKALMPGVIVFVDNCYGEFTEKLEPTQ--VGADLIAGSLIKNPGGG-IAETGGYICGRRELVEQAAYRLTAPGIGGEVGAMLGTTRGLYQGLFMAPHTVGQALKGSIFAAAVFARCGF 306          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A366I4F3 (Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Alkalibaculum bacchi TaxID=645887 RepID=A0A366I4F3_9FIRM)

HSP 1 Score: 124 bits (310), Expect = 1.530e-30
Identity = 69/176 (39.20%), Postives = 114/176 (64.77%), Query Frame = 0
Query:    2 DFGITYSEVDLKDGEVNFDGIGDKMNDRTKVVFIQKYN----------SDVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYD 164
            D+G+ Y++VDL  G+V++  I + ++ +TK+++IQ+            S +A ++   K +K  V+V VDNC+ E  +  E TD  +GAD+ AGSLIK  GGG ISP+GGYIVG+++ V +A  RL A G+  E+G++LG+ +T  Q LF+AP   ++++K++ L A+    LG++
Sbjct:  147 DYGVNYNQVDLVSGKVDYPSIKEAIHSKTKMIYIQRSTGYAWRNALTISQIAELIDFVKGIKKDVIVMVDNCYGEFMDTLEPTD--VGADLIAGSLIKNPGGG-ISPTGGYIVGKEEYVYKAACRLSAPGIAKETGSTLGINRTYLQGLFLAPHIVSEAVKTAILAAKVFEDLGFE 319          
BLAST of Ggra4215.t1 vs. uniprot
Match: A0A0C7QR01 (Pyridoxal phosphate-dependent transferase putative aluminium resistance n=23 Tax=Clostridia TaxID=186801 RepID=A0A0C7QR01_PAESO)

HSP 1 Score: 123 bits (309), Expect = 1.960e-30
Identity = 72/177 (40.68%), Postives = 115/177 (64.97%), Query Frame = 0
Query:    2 DFGITYSEVD-LKDGEVNFDGIGDKMNDRTKVVFIQKYN----------SDVARIVKLAKALKSGVVV-VDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGGYIVGRKQLVQQARWRLFAAGV--ESGASLGLTKTLAQALFMAPCNTAQSLKSSALIAETMWQLGYD 164
            +FG+TY++VD L++GEV+ +GI +K+ND+TK+V IQ+            SD+  +++  K++K  V+V VDNC+ E  E  E TD  +GAD+ AGSLIK  GGG ++ +GGYIVG+K+LV+   +RL + G+  E G + G ++T+ Q  F+AP   +Q+L  +   +    +LGY+
Sbjct:  144 EFGVTYNQVDFLENGEVDLEGIKEKINDKTKLVMIQRSKGYSWRKSLTISDIKEVIETVKSIKPEVIVMVDNCYGEFIETKEPTD--VGADIMAGSLIKNPGGG-LALTGGYIVGKKELVELISYRLTSPGIGKECGLTFGTSRTVLQGFFLAPYVVSQALMGAIFCSRMFEKLGYE 317          
The following BLAST results are available for this feature:
BLAST of Ggra4215.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0ZCL91.040e-3344.75Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A1M6G9Q65.130e-3341.81Cystathionine beta-lyase family protein involved i... [more]
A0A1H3ZNG52.000e-3244.00Cystathionine beta-lyase family protein involved i... [more]
A0A2K2FPP92.000e-3244.94Uncharacterized protein n=2 Tax=Pseudoclostridium ... [more]
A0A7X7X3I01.430e-3140.68Uncharacterized protein n=1 Tax=Clostridiaceae bac... [more]
A0A097ARM32.830e-3141.24Aluminum resistance family protein n=1 Tax=Thermoa... [more]
R6V9Z91.080e-3043.18Aluminum resistance protein n=7 Tax=Eubacteriales ... [more]
A0A2Z2K9431.260e-3046.02Uncharacterized protein n=1 Tax=Paenibacillus dong... [more]
A0A366I4F31.530e-3039.20Cystathionine beta-lyase family protein involved i... [more]
A0A0C7QR011.960e-3040.68Pyridoxal phosphate-dependent transferase putative... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009651Putative methionine gamma-lyasePFAMPF06838Met_gamma_lyasecoord: 2..164
e-value: 4.5E-39
score: 134.1
IPR009651Putative methionine gamma-lyasePANTHERPTHR46658FAMILY NOT NAMEDcoord: 1..164
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..127
e-value: 2.7E-28
score: 100.5
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 3..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:92363..92903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4215.t1Ggra4215.t1Gracilaria gracilis GNS1m malemRNAtig00000880_pilon 92363..92903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4215.t1 ID=Ggra4215.t1|Name=Ggra4215.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=166bp
MDFGITYSEVDLKDGEVNFDGIGDKMNDRTKVVFIQKYNSDVARIVKLAK
ALKSGVVVVDNCFSELCEATEATDDSIGADMAAGSLIKGIGGGGISPSGG
YIVGRKQLVQQARWRLFAAGVESGASLGLTKTLAQALFMAPCNTAQSLKS
SALIAETMWQLGYDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009651Met_g_lyase_put
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase