Ggra4168.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4168.t1
Unique NameGgra4168.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1000
Homology
The following BLAST results are available for this feature:
BLAST of Ggra4168.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 754..850
e-value: 7.8E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..197
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 758..963

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:456660..461380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4168.t1Ggra4168.t1Gracilaria gracilis GNS1m malemRNAtig00000853_pilon 456660..461380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4168.t1 ID=Ggra4168.t1|Name=Ggra4168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1000bp
MDIENEGKLIVGEALLPGLGTKLRRELNGKQLERGLVVVHNFLISRTGQT
FYPYQTEGIELPQYIQDLRMAAPWDEQMMEAVASSIHASKRRTNSEMTTP
RRQSEPVQSSTSITASVPPSATRKAGSSSSGVKKTVSTKTPGAQQERKTS
TPSKEIETDDIIEAPLAAETDARSTEGAGPSAPPPPPEADNHPDVVFLSQ
RMARSVVSGDDSAPRWSRRRFKSLQQKLKKVNLDHYVMVAVTVGIDLVEK
PPNMLRGVSEHHVQTLVESMRDRGILDSMGTPVVALQEATTGDRDIASGR
LIKKCFIIDGMHRLIAIKVLAQEGKQKWERSYKHWRCNLIRWRDSRVIGM
EEILCIVWYMEGMTPADINPEEVMEVLKESQLIGNIQERQYLRYANVTLQ
LMSREGLLEHFESICETQNDVALTHLSHNPLFDLDGEEFLFILDAIQMFL
SKGKSTKAKQWKSFEEVRGFFYDRAVCMFRAARAMRNELDESEPMEEFLK
REIKLSAPQGEDEIEDPDNTATVSQFVLGQVVNFNVLPRVRTREKSILNA
TSLLQSRLWKMLNLITPSVAGKQPVTRGKPPTAPSAAGSEEGSLRRSARG
RTAVSYRELVAGGGTREVTEVSDDDVQPPARKKQRRTFTQQMRSTLSNML
PQDLLSQLNQYVFRGKSMQVKFVDLDGRGDNNVVIGRMSAGDSTYCSLSG
SRISELGTEDGAVPVCHIESEVTVLATMAERKRHFKVSSPEKLAEYIFSN
GYGILSAVDGTLRRGKERISEEVVDCMKFINDRVGFGLATGEDVFELKEM
MEGLGDYKFGISSNHGAHVRFSDDTEMLADLELHKKEACVDGLLVLARVW
NKRHGIVRDEEKGCVESKQDSGLPIFVYNGLLDWRDEVDSGIREVLEKLD
NFIFYPGDEICEIVDKRYTKSCGGTNLVDHEPKFVDTDEVVTFENAWSDG
PLHSVAVLGVHVRGDEVPHGVEDIFENVDDVHMTTRLIAGLYGYVKENE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf