Ggra4155.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4155.t1
Unique NameGgra4155.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length554
Homology
BLAST of Ggra4155.t1 vs. uniprot
Match: A0A2V3II82 (MFS domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II82_9FLOR)

HSP 1 Score: 620 bits (1599), Expect = 1.120e-216
Identity = 335/555 (60.36%), Postives = 427/555 (76.94%), Query Frame = 0
Query:    1 MATAAEISPLLPANSQAVNC---GSDSKRPSKQILFDEPQIAKCPRLKECMQNLLSPSGLGHPIHHHLQSPSLLFQIERSLEKGLSFLVDKVRLLRLFPKNDEEKHQVDPTRVFVHITFGLAILTMLAMTTVSPTVVLYMNHVNFTSSTNITPYVVASALSSAVPIASNVIFGRVASSIGPANALAIIAFTAAVGIGLVLAVRSTLLVFFIGYALYAASNSMRIIRLSILSQIVPENKRTTVLATHALMTPVGALLGPITWIALSRYQGSLQYGQFVIDRFSLAYFLAFAILVSIGLLAAVALRKLPTTEGHQSTQSYDEPTEVLVHQPDGSDIIVSINEFRARVFGYFCAIMLCVNMSSGIYMTAFQPILVNEFQVTDAKLGLVFEIIAVFAIVPPLLVAFLSRYVMDRHIMVIGLGSKLIGMILFLPIFGPVREWQVIIGFMLIIKASIFFSTASMSLFTKVLGSLSNSALIGLLASGSSVGPAVAQLLVSDHIVQFFGGYKFALFSLPAIIGMLMILYPHFWERLNPNCPFVRQIAQQLIAARTRFEKSGNE 552
            MA + E+SPLLP  S A +C   G D +   K+  +D+P    CPR ++ +Q+  SP G G+P+HHHLQSPS           G SFLV+K++LLR FP+   +   V  ++ FV I F LA+LTM+ M  VSPT+VLYMN+V+FTSSTNIT YV ASA++SAVP+ SN++FGR+ASSIGPANAL ++   +A+G+ LV ++RS L VFF+GY LY+AS SMRIIR+SILSQIVPE+KRTTVLATH+LMTPVGAL+GP+ WI LSRY+GS   G   IDRF+LAY  A  ILV I L++A  LR +PT EG+ S   ++ P+ V +   +G    V+++EFR++VFGYFC IM CVNMSS IYMTAFQPILVNEF V+DAKLGL+FE+IA+FAIVPPLLVA LS+Y+MDR IMVIGL +K++GM LFLP+FGPVREWQVIIGFMLIIKAS+FF TA MSLFTKVLG+LS+SALIGLLASGSSVG A+AQ+L+ D+I QFFGG+KF  FSLPA++GM  I+ P +W+RL+PNC F + IA++  AAR + ++   +
Sbjct:    1 MAPSTEVSPLLPKGSDA-HCILQGVD-EACLKKFTYDDPLCPICPRPRQYLQSCTSPCGYGYPMHHHLQSPS----------HGFSFLVEKLKLLRFFPQQKPKATDVPSSQRFVFIVFILAVLTMVCMAIVSPTMVLYMNYVHFTSSTNITAYVTASAIASAVPVVSNIVFGRIASSIGPANALVLLGMLSALGMLLVFSMRSALWVFFLGYGLYSASLSMRIIRISILSQIVPEDKRTTVLATHSLMTPVGALVGPLGWIVLSRYKGSFSLGPLTIDRFALAYGTAATILVIISLISATRLRGIPTPEGNGSRDHFEPPSHVTIQTQNGDTTRVNLHEFRSQVFGYFCTIMFCVNMSSDIYMTAFQPILVNEFGVSDAKLGLIFEVIAMFAIVPPLLVALLSKYLMDRQIMVIGLFAKVLGMALFLPLFGPVREWQVIIGFMLIIKASVFFITACMSLFTKVLGTLSSSALIGLLASGSSVGSALAQVLIGDYIAQFFGGFKFVFFSLPAVVGMAAIVIPRYWKRLDPNCEFTKLIAEETNAARLQHQRRSGQ 543          
BLAST of Ggra4155.t1 vs. uniprot
Match: A0A7S0G3Y8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3Y8_9RHOD)

HSP 1 Score: 300 bits (768), Expect = 1.950e-91
Identity = 178/438 (40.64%), Postives = 277/438 (63.24%), Query Frame = 0
Query:  116 FGLAILTMLAMTTVSPTVVLYMNHVNFTSSTNITPYVVASALSSAVPIASNVIFGRVASSIGPANALAIIAFTAAVGIGLVLAVRSTLLVFFIGYALYAASNSMRIIRLSILSQIVPENKRTTVLATHALMTPVGALLGPITWIALSRYQGSLQYGQFV-------IDRFSLAYFLAFAILVSIGLLAAV------ALRKLPTTEGHQSTQSYDEPTEVLVHQPDGSDIIVSINEFRARVFGYFCAIMLCVNMSSGIYMTAFQPILVNEFQVTDAKLGLVFEIIAVFAIVPPLLVAFLSRYVMDRHIMVIGLGSKLIGMILFLPIFGPVREWQVIIGFMLIIKASIFFSTASMSLFTKVLGSLSNSALIGLLASGSSVGPAVAQLLVSDHIVQFFGGYKFALFSLPAIIGMLMILYPHFWERLNPNCPFVRQIAQQLI 540
            + LA   M+ MTTVSPT++LY N+  +T+ TN+T +   S  +  VP+  N++ G   ++     A+  +     +G+ L++   S  L F  GY L + + S RI RL+ LS+IVP  ++T V+A HAL TP+GA+LGPI W+AL  YQG      F+       ++RF+L + L   +LVS+G++  V      A  + P   G   +     P ++  +   G++  V   +FR RVF YFC +M  +N S+G +  AFQPILV+ F+VT++ +GL+FE I+V AIVPPLLVA LSR++ DR +M++G+ +K++GM+L+   FG +  WQ ++G +LIIKASIFF T+++SLFTK+LG LS  A IG+L+S ++VGPAVAQLL    ++  +G Y + LF +PA++G  ++ YP F++ L+PN  F++Q+   ++
Sbjct:  122 YALAFFVMMTMTTVSPTLLLYTNYRGWTTETNLTFFASLSLANVVVPVIGNIVVGNWLAATSVRTAMMGMLSITILGLLLMITAESKYL-FLAGYTLLSLNTSNRIARLTFLSEIVPAKQKTFVMANHALATPLGAMLGPICWLALVNYQGEAGPWTFIPGVMSFRLNRFTLVFLLT--LLVSLGMMVLVWIYFPGANSRDPEKSGTGRSAPIVGPVQLSYN---GAEETVDSGQFRYRVFRYFCMVMFLINFSAGFFQVAFQPILVDYFKVTESSMGLIFETISVLAIVPPLLVALLSRFLEDRQLMLVGICAKMLGMLLYCFPFGKMHVWQPVVGNILIIKASIFFFTSALSLFTKILGPLSGGAWIGILSSVAAVGPAVAQLLALRLVLTIYGTYWYFLFCVPAVLGFFLVAYPWFYKYLDPNREFIQQLHTAVV 553          
BLAST of Ggra4155.t1 vs. uniprot
Match: A0A7S3E9V2 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9V2_9RHOD)

HSP 1 Score: 293 bits (749), Expect = 1.260e-88
Identity = 169/433 (39.03%), Postives = 276/433 (63.74%), Query Frame = 0
Query:  116 FGLAILTMLAMTTVSPTVVLYMNHVNFTSSTNITPYVVASALSSAVPIASNVIFGRVASSIGPANALAIIAFTAAVGIGLVLAVRSTLLVFFIGYALYAASNSMRIIRLSILSQIVPENKRTTVLATHALMTPVGALLGPITWIALSRYQGSLQYGQFV-------IDRFSLAYFLAFAILVSIGLLAAV------ALRKLPTTEGHQSTQSYDEPTEVLVHQPDGSDIIVSINEFRARVFGYFCAIMLCVNMSSGIYMTAFQPILVNEFQVTDAKLGLVFEIIAVFAIVPPLLVAFLSRYVMDRHIMVIGLGSKLIGMILFLPIFGPVREWQVIIGFMLIIKASIFFSTASMSLFTKVLGSLSNSALIGLLASGSSVGPAVAQLLVSDHIVQFFGGYKFALFSLPAIIGMLMILYPHFWERLNPNCPFVRQI 535
            + LA   M+ MTT+SP ++LY N+  +T+ TN+T +   S  +  VP+  N++ G   ++     A+  +     +G+ L++   S+ L F  GY L + + S RI+RL+ LS+I+P   +T V+A HAL TP+GA+LGP++W+AL  +Q       F+       ++RF+LA+ L   +LV++G++  V      A  + P   G   ++    P  +  +    S+  V   +FR  VFGYFC +M  +N S+G +  AFQPILV+ F+VT++ +GL+FE I++FAI+PPLLVA LSR++ DR +M++G+ +K++GM L+   FG ++ WQ ++G +LIIKASIFF T+++SLFTK+LG LS   +IG+L+S S+VGPA+AQLL    ++  +G Y + LF++PA++G  ++ +P F+  L+PN  F++Q+
Sbjct:  122 YALAFFVMMTMTTISPILLLYTNYRGWTTETNLTFFASLSLANVVVPVIGNIVVGNWLAATSVRTAMMGMLGITILGLLLMITAESSHL-FLAGYTLLSLNTSNRIVRLTFLSEIIPAKHKTFVMANHALATPLGAMLGPVSWLALVNFQAEAGPWTFIPGFMGVRLNRFTLAFSLT--VLVTLGMMVLVWIYFPGANSQGPGKRGGARSEPIVGPVRLSYND---SEETVDSGKFRYGVFGYFCMVMFLINFSAGFFQVAFQPILVDYFKVTESSVGLIFETISIFAIIPPLLVALLSRFLEDRQLMLVGICAKMLGMFLYCFPFGKMQIWQPVVGNILIIKASIFFFTSALSLFTKILGPLSGGPMIGILSSVSAVGPAIAQLLALRLVLTIYGTYWYFLFTIPAVLGFFLVAHPWFYSTLDPNREFIKQL 548          
BLAST of Ggra4155.t1 vs. uniprot
Match: A0A7S1NCL5 (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NCL5_9EUGL)

HSP 1 Score: 85.1 bits (209), Expect = 9.660e-14
Identity = 108/408 (26.47%), Postives = 190/408 (46.57%), Query Frame = 0
Query:  156 ALSSAVPIASNVIFGRVASSIGPANALAIIAFTAAVGIGLVLAVRSTLLVFFIGYALYAASNSMRIIRLSILSQIVPENKRTTVLATH-----------ALMTPVGALLGPIT---WIALSRYQGSLQYGQFVIDRFSLAYFLAF-AILVSIGLLA----AVALRKLPTTEGHQSTQSYDEPTEVL-VHQPDGSDIIVSINEFRARVFGYFCAIMLCVNMSSGIYMTAFQPILVNEFQ-----VTDAKLGLVFEIIAVFAIVPPLLVAFLSRYVMDRHIMVIGLGSKLIGMILF-LPIFGPVREWQVIIGFMLIIKASIFFSTASMSLFTKVLGSLSNSALIGLLASGSSVGPAVAQLLVSDHIVQFFGGYKFALFSLPAIIGMLMILYPHFWERLNPNCPFVRQIAQ 537
            A+ +  P+  N I+G  +   G  N + +    +AVGI  ++A  S   ++ +G  L  +S  +R +R + ++ +   + RT  +A              L+T V  LLGP     W+ L             +D  +L+   A+ A ++++G+L      V+  K    +   S  ++ E T ++ V   +G    V    +   +   F  + L   MS G +     P+L   FQ     + DAKL   F+   +  +  PLLVA+LS+++ DR ++VIG     IGM +F LP    V   + I G MLI  +  FF T   SLF+K++G +S    + L+AS + +G ++   + S    +++G + F L  +P+ + M+++  P F+  L P+ P  R I +
Sbjct:  178 AIMTLFPVLMNPIWGHFSERYGVRNVIRVALMLSAVGIA-IMAFTSEAALYPLGILL-ESSQGVRPLRTAYIAVVTHPSVRTQAMAFQNLFTDSMRIVAILVTKVWDLLGPTPDEPWVLLGVE----------LDTHALSLLTAWTANILNVGILTFFFQEVSEEKKLLRQN--SPTAHVELTRLIYVDLGNGGHQPVDSRMYANSMLCIFSLVCLLHQMSCGFFFVCNMPVLAKHFQLQGDAIQDAKL---FQ--DLLPMPAPLLVAYLSKHMQDRTLLVIGFCISGIGMAIFALPPTDHVL--RPIFGLMLINWSQAFFYTTMFSLFSKIMGPMSTGYRLALMASAAGLGTSIGTFVSSA--AEYYGTFTFCLGVVPSALAMVIMAGPWFYPYLQPDHPVTRTILE 562          
The following BLAST results are available for this feature:
BLAST of Ggra4155.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3II821.120e-21660.36MFS domain-containing protein n=2 Tax=Gracilariops... [more]
A0A7S0G3Y81.950e-9140.64Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E9V21.260e-8839.03Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S1NCL59.660e-1426.47Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 116..485
e-value: 4.0E-18
score: 65.5
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 337..521
e-value: 4.1E-12
score: 47.8
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 104..317
e-value: 4.0E-11
score: 44.7
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 106..521
NoneNo IPR availablePANTHERPTHR23510INNER MEMBRANE TRANSPORT PROTEIN YAJRcoord: 101..525
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 434..458
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 459..469
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 470..488
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 429..433
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 301..341
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 519..553
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 500..518
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 408..428
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 402..407
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 200..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 381..401
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 362..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 489..499
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 342..361
NoneNo IPR availableCDDcd06174MFScoord: 116..511
e-value: 1.38289E-12
score: 67.4518
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
NoneNo IPR availableTMHMMTMhelixcoord: 342..364
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 465..487
NoneNo IPR availableTMHMMTMhelixcoord: 379..401
NoneNo IPR availableTMHMMTMhelixcoord: 408..430
NoneNo IPR availableTMHMMTMhelixcoord: 281..300
NoneNo IPR availableTMHMMTMhelixcoord: 436..458
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 502..521
NoneNo IPR availableTMHMMTMhelixcoord: 177..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:414683..416344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4155.t1Ggra4155.t1Gracilaria gracilis GNS1m malemRNAtig00000853_pilon 414683..416344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4155.t1 ID=Ggra4155.t1|Name=Ggra4155.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=554bp
MATAAEISPLLPANSQAVNCGSDSKRPSKQILFDEPQIAKCPRLKECMQN
LLSPSGLGHPIHHHLQSPSLLFQIERSLEKGLSFLVDKVRLLRLFPKNDE
EKHQVDPTRVFVHITFGLAILTMLAMTTVSPTVVLYMNHVNFTSSTNITP
YVVASALSSAVPIASNVIFGRVASSIGPANALAIIAFTAAVGIGLVLAVR
STLLVFFIGYALYAASNSMRIIRLSILSQIVPENKRTTVLATHALMTPVG
ALLGPITWIALSRYQGSLQYGQFVIDRFSLAYFLAFAILVSIGLLAAVAL
RKLPTTEGHQSTQSYDEPTEVLVHQPDGSDIIVSINEFRARVFGYFCAIM
LCVNMSSGIYMTAFQPILVNEFQVTDAKLGLVFEIIAVFAIVPPLLVAFL
SRYVMDRHIMVIGLGSKLIGMILFLPIFGPVREWQVIIGFMLIIKASIFF
STASMSLFTKVLGSLSNSALIGLLASGSSVGPAVAQLLVSDHIVQFFGGY
KFALFSLPAIIGMLMILYPHFWERLNPNCPFVRQIAQQLIAARTRFEKSG
NEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf