Ggra4029.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4029.t1
Unique NameGgra4029.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length147
Homology
The following BLAST results are available for this feature:
BLAST of Ggra4029.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..138
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
NoneNo IPR availableCOILSCoilCoilcoord: 75..102
NoneNo IPR availableGENE3D1.10.287.1490coord: 14..145
e-value: 9.0E-6
score: 27.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:400787..401227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4029.t1Ggra4029.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 400787..401227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4029.t1 ID=Ggra4029.t1|Name=Ggra4029.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=147bp
MIGVLLKLSLILVVVNSKRVIRQRRRRRDSLQKEVDERENEISFVKERIR
KFPERNERIRNELDQAWEARARYAFAKDENLRDALQAQLSDLEGQVNLLK
EQEAWRKHERVDELEGILAALRQKIARRDAIIEEMESRREANGGER*
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