Ggra4028.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4028.t1
Unique NameGgra4028.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length236
Homology
BLAST of Ggra4028.t1 vs. uniprot
Match: A0A2V3ILU1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILU1_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 7.960e-94
Identity = 143/236 (60.59%), Postives = 175/236 (74.15%), Query Frame = 0
Query:    3 DAFISPA---HNLRLAKFRRNTLSATTKCPVRCEQTKSPNRAETDAVTAAAATFILQRAAKAYTTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKRKPAWLRFLYFPIRAHQTFTPPDEGGEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLKWKKDERGKEKVAFEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAKVPQGQEIY 235
             AF+SPA   H       RR+TL     CPV+C+ + S  + E  A+ AAAATFILQRAAK+YT G  +P P+ V QA+ QLEKAQKR+K T+DG  I+GQWRLVF  +P+ K   LR LYFP+RAHQTFT  ++G EFDNA+H G   F VTGPFRW++ RNR+EFTV+R +  LGPLKW+KD+  K+KV FE    R LPFFTFFLLRENLAAARGR+GGLALYAKVP+G+E+Y
Sbjct:   22 QAFLSPALQTHLFNRPFSRRHTLVHRALCPVKCKLSSS-EQTEASAMAAAAATFILQRAAKSYTKGERRPQPLVVLQALLQLEKAQKRNKVTVDGSKIVGQWRLVFTGDPRTKNPLLRKLYFPVRAHQTFTAEEDGSEFDNAIHVGFVHFHVTGPFRWVTARNRLEFTVDRAKLSLGPLKWQKDDLEKDKVPFEQRTSRTLPFFTFFLLRENLAAARGRSGGLALYAKVPEGEELY 256          
BLAST of Ggra4028.t1 vs. uniprot
Match: R7QBX0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBX0_CHOCR)

HSP 1 Score: 183 bits (465), Expect = 2.360e-54
Identity = 96/206 (46.60%), Postives = 132/206 (64.08%), Query Frame = 0
Query:   32 CEQTKSPNRAETDAVTAAAATFILQRAAKAYTTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKRKPAWLRFLYFPIRAHQTFTPPDEG-GEFDNAVHF--GVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLKWKKDERGKEKVAFEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAKVPQGQEI 234
            CEQ ++P+  E  A+ AAAA+F+L +AA AYT GG +P    V  A+R+LE+ Q+R+K   D + + GQWRLVF A+ K K   L+ +YFP+RA QTF P D+  G FDN + F      FR  GP RW    NR+EFTV+  + ++G  +WKK    KE    E    + LPFFTFF +R+++ AARGR+GGLALYA+VP  + +
Sbjct:   37 CEQ-QAPSAQENSAMVAAAASFVLTKAASAYTKGGRRPGGSTVTTALRELEREQRRNKTKSDIDLLYGQWRLVFTADEKTKNPLLKAVYFPVRAQQTFIPGDKDVGVFDNGIFFFGSTAFFRFRGPARWQPKMNRLEFTVDELEVKIGSFRWKKAGLDKEGPTLEGRTAKTLPFFTFFSIRKDILAARGRSGGLALYARVPDDERL 241          
BLAST of Ggra4028.t1 vs. uniprot
Match: G6FYM4 (Uncharacterized protein n=10 Tax=Fischerella TaxID=1190 RepID=G6FYM4_9CYAN)

HSP 1 Score: 97.4 bits (241), Expect = 3.610e-21
Identity = 69/196 (35.20%), Postives = 98/196 (50.00%), Query Frame = 0
Query:   52 TFILQRAAKAYT-TGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKRKPAWL-----RFLYFPI--RAHQTFTPPD---EGGEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFEL-GPLKWKKDERGKEKVA--FEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAKVPQGQE 233
            T +L++A  AY      +PA   V  A+ Q EKA K+ K T    ++LGQWRL F    +++         R  Y P    AH  F   D   + GE  N V  G    + TGP R++  +N + F   + Q  L G + +K+  RG +     F +  +  LPFF FFL+ E+L AARGR GGLA++ K  + QE
Sbjct:   15 TTVLEQAVSAYRGEASDRPAVPTVVNALLQAEKAAKQKKLTYPLTSLLGQWRLCFTTGTRKRKNRRGIELGRGFYLPKFGAAHICFAATDIAADKGEISNQVQLGGLLLKFTGPARYLGKKNLLAFDFTQMQISLFGRVVYKQQIRGGQSQTEDFYNQSIAKLPFFAFFLVTEDLIAARGRGGGLAIWIKGDKRQE 210          
BLAST of Ggra4028.t1 vs. uniprot
Match: A0A1Z4TTX1 (Uncharacterized protein n=1 Tax=Fischerella sp. NIES-4106 TaxID=2005456 RepID=A0A1Z4TTX1_9CYAN)

HSP 1 Score: 92.4 bits (228), Expect = 2.390e-19
Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 0
Query:   54 ILQRAAKAYTTG-GMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKR--KPAWL---RFLYFP--IRAHQTFTPPD--EG-GEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFEL-GPLKWKKDERGKEKVA--FEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAKV--PQGQEI 234
            +L +A  AY    G +P   AV  A+ Q EK  K+ K      ++LGQWRL F    ++  K   +   R  Y P    AH  F   D  +G GE  N V  G    ++TGP R++  +N + F   + Q  L G + +K+  RG +     F +  +  LPFF+FFL+ E+L AARGR GGLA++ K   P G +I
Sbjct:   17 VLHQAVFAYRQETGDRPRATAVVNALLQAEKTTKQQKIKYTFTSLLGQWRLYFTTGTRKLKKRGGIELGRGFYLPKLASAHICFAATDMVDGKGEIGNQVQLGPLLLKLTGPARYLGKKNLLTFDFTQMQISLFGRVVYKQQIRGGKSQTEDFYNQAIAKLPFFSFFLITEDLIAARGRGGGLAIWIKEDSPSGMKI 213          
BLAST of Ggra4028.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI0014458ED4 (hypothetical protein n=1 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI0014458ED4)

HSP 1 Score: 91.7 bits (226), Expect = 3.940e-19
Identity = 66/190 (34.74%), Postives = 91/190 (47.89%), Query Frame = 0
Query:   54 ILQRAAKAYTTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKRKPAWLRFL-----YFP--IRAHQTFTPPDEG----GEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLKW----KKDERGKEKVA-FEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAK 227
            +L   A AY  G   PA   V  A+   EK  K  K     E++ G+WRL F    K+       +     Y P  I+ H  F+  +E     GE  N V  G   F++TGPF+++  +N + F   + Q  L    W    K    GK+K + F+   +  LPFF FFL+ E+L AARGR GGLAL+ K
Sbjct:   16 LLSHTATAYREGSQLPAAEVVVNALLAAEKTAKLQKLNYPFESLGGKWRLCFATGTKKVRNRGGIIIGKGRYVPKFIKIHLGFSTREEQALGKGEIMNQVQLGAILFKLTGPFKYLGKKNLLAFDFTQIQISL--FNWMFVNKAIFSGKDKDSNFDAQPIAKLPFFAFFLVTEDLIAARGRGGGLALWIK 203          
BLAST of Ggra4028.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000348D7FB (hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000348D7FB)

HSP 1 Score: 91.3 bits (225), Expect = 4.820e-19
Identity = 63/194 (32.47%), Postives = 104/194 (53.61%), Query Frame = 0
Query:   54 ILQRAAKAYTT-GGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKRKPAWLRFL-----YFP----IRAHQTFTP---PD---EGGEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFEL-GPLKWKKDERG---KEKVAFEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAK 227
            +LQ+AA++ TT  G KP+P AV  A+   EK  K+SK     + ++G WRL FI   K+       +     Y P    I+   +  P   PD   + G  +N V FG  +  ++GP ++++G+N + F   R   +L G + ++   RG   KE+  +E+  V    FF++F++ +++ AARGR GGLAL+ +
Sbjct:    6 VLQQAAQSITTQSGSKPSPPAVVDALLLAEKTAKKSKTHYSFDPLIGDWRLCFITGTKKTRQRAGVVMGAGRYIPGLVSIQLSYSAAPAPSPDSSIQAGNVENIVRFGAVRLALSGPAKFLAGKNILAFDFTRISVQLFGRVVYQGSMRGGEAKEREFYEE-SVSKQAFFSYFIIGDDIIAARGRGGGLALWGR 198          
BLAST of Ggra4028.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001D153140 (hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001D153140)

HSP 1 Score: 90.9 bits (224), Expect = 7.700e-19
Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   63 TTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKR--KPAWL-----RFLYFPIRAHQTFTPPDEG---GEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLK----WKKDERGKEKVAFEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAKV 228
            T+    PA  +V +A+ Q EK  K+ K       +LG WRL FI   KR  K A +     RFL   ++ H +++P + G   G   N+V  G+ +  +TGP ++ S  N + F   R +  L  L     + +  R +E   F +  V++  FFT+FL++E   AARGR GGLAL+AKV
Sbjct:   26 TSSATPPASESVVEALLQAEKTAKKVKLRHSYSQLLGSWRLGFITGTKRSRKRAGVILGAGRFLPKWVKIHLSYSPSEPGTEQGTVQNSVELGLLQIVLTGPTQFFSKTNILAFDFTRIRVSLLGLNLYEGYIRGGRNRE-ARFYEQSVKEQAFFTYFLVQEGSIAARGRGGGLALWAKV 204          
BLAST of Ggra4028.t1 vs. uniprot
Match: B7KID2 (Uncharacterized protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KID2_GLOC7)

HSP 1 Score: 90.5 bits (223), Expect = 8.830e-19
Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   66 GMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPK--RKPAWL-----RFLYFPIRAHQTFTP-PDEGGEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLK-WKKDERGKEKVA--FEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAK 227
            G KP+P  V   + Q EK  K+SK     E + G WRL FI   +  R  A +     R+L   +R + +++   D  G  +N+V  G+ KF ++GP +++  +N + F   R   +L  +K +    RG +K    F   K+    FFT+FL+R+NL AARGR GGLAL+ +
Sbjct:   20 GEKPSPEKVVDLLLQSEKLSKKSKERDKFEQLAGNWRLCFITGTRKVRNRAGIILGSGRYLPSWVRIYLSYSDITDTTGNIENSVELGLIKFSLSGPTKFLPQKNILVFDFTRMSIKLFGVKLYDGFIRGGQKSEDKFYQEKINQQAFFTYFLIRDNLIAARGRGGGLALWGR 192          
BLAST of Ggra4028.t1 vs. uniprot
Match: A0A1Z4JFB0 (Uncharacterized protein n=3 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JFB0_LEPBY)

HSP 1 Score: 89.7 bits (221), Expect = 1.410e-18
Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 0
Query:   54 ILQRAAKAYTTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKR-KPAWLRF---LYFPIRAH-QTFTPPDEGGEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFELGPLKWKKDE-RGKE--KVAFEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAK 227
            IL +AAKA+  G  +P    V  A+ Q EK  K+       + ++GQWRL F    ++ +   ++     Y P  A  Q     DE     N    G  + + TGP R+ + +N + F   + Q   G +  KK   RG E  +  FE++ +  LPFF FFL+ ++L AARGR GGLAL+ +
Sbjct:    5 ILNQAAKAFRDGTPRPDANQVVDALLQAEKFAKQHPPQFSFDQLVGQWRLCFATGTRKLRQGGIQLKKGYYVPKLAKAQISFARDEAERIGNLAQLGALQLKFTGPARFQTKKNLLAFEFTQIQVTFGSIVLKKGAVRGGEAKEQEFEEISIAKLPFFAFFLITDDLIAARGRGGGLALWIR 186          
BLAST of Ggra4028.t1 vs. uniprot
Match: A0A4D9CC97 (Uncharacterized protein n=3 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A4D9CC97_MASLA)

HSP 1 Score: 89.4 bits (220), Expect = 3.140e-18
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   54 ILQRAAKAYTTG-GMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQWRLVFIANPKR--KPAWL---RFLYFP--IRAHQTFTPPD--EG-GEFDNAVHFGVGKFRVTGPFRWISGRNRMEFTVNRFQFEL-GPLKWKKDERGKEKVA--FEDMKVRDLPFFTFFLLRENLAAARGRTGGLALYAK 227
            +L +A  AY    G +P   AV  A+ Q EKA K+ K      ++ GQWRL FI   ++  K   +   R  Y P    AH  F   D  +G GE  N V  G    ++TGP +++  +N + F   +    L G + +++  RG E     F +  +  LPFF+FFL+ E+L AARGR GGLA++ +
Sbjct:   17 VLDQAVSAYRKEIGDRPKASAVVNALLQAEKATKQQKIQYPFTSLFGQWRLYFITGTRKLKKRGGIELGRGFYLPKLASAHICFAATDIADGKGEIANQVQLGPLLLKLTGPAKYLGKKNLLTFDFTQMHISLFGRVVYRQQIRGGESQTEDFYNQTIAKLPFFSFFLITEDLIAARGRGGGLAIWIR 204          
The following BLAST results are available for this feature:
BLAST of Ggra4028.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILU17.960e-9460.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBX02.360e-5446.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
G6FYM43.610e-2135.20Uncharacterized protein n=10 Tax=Fischerella TaxID... [more]
A0A1Z4TTX12.390e-1935.53Uncharacterized protein n=1 Tax=Fischerella sp. NI... [more]
hypothetical protein n=1 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI0014458ED43.940e-1934.74hypothetical protein n=1 Tax=unclassified Anabaena... [more]
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000348D7FB4.820e-1932.47hypothetical protein n=1 Tax=Oscillatoria sp. PCC ... [more]
hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001D1531407.700e-1935.00hypothetical protein n=1 Tax=unclassified Coleofas... [more]
B7KID28.830e-1934.68Uncharacterized protein n=1 Tax=Gloeothece citrifo... [more]
A0A1Z4JFB01.410e-1833.52Uncharacterized protein n=3 Tax=Leptolyngbya TaxID... [more]
A0A4D9CC973.140e-1834.57Uncharacterized protein n=3 Tax=Hapalosiphonaceae ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35690OS01G0363500 PROTEINcoord: 25..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:398590..399297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4028.t1Ggra4028.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 398590..399297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4028.t1 ID=Ggra4028.t1|Name=Ggra4028.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=236bp
MNDAFISPAHNLRLAKFRRNTLSATTKCPVRCEQTKSPNRAETDAVTAAA
ATFILQRAAKAYTTGGMKPAPVAVAQAMRQLEKAQKRSKATIDGENILGQ
WRLVFIANPKRKPAWLRFLYFPIRAHQTFTPPDEGGEFDNAVHFGVGKFR
VTGPFRWISGRNRMEFTVNRFQFELGPLKWKKDERGKEKVAFEDMKVRDL
PFFTFFLLRENLAAARGRTGGLALYAKVPQGQEIY*
back to top