Ggra4020.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4020.t1
Unique NameGgra4020.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
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BLAST of Ggra4020.t1 vs. uniprot
Match: A0A2V3IQM9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQM9_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 2.990e-28
Identity = 86/195 (44.10%), Postives = 109/195 (55.90%), Query Frame = 0 
Query:    7 NGRTGCLSYSAGATVVPCTQPDSSPAVCFA--APRTHSLPYASSAPTLSPL----------DDDRVPYSDDRIQSDDCYSRTVQRLKLCIPRSKPIPVPRARPRAP-RPLASTPPLPDARPIVSRFLRREEARRRGESPFVDPFVEWGAGSDTASMYNPFVSTNGQDA-EITPGRPPREDAYLRRRAYFDEDEFY 187
            N  T   S+   A+    +QP     +CFA   PR H + Y  SAPTL+ +          D D +   DD +  ++ +      L+L IP SKPIPVP+ARPRA   P+ S PPLPDARPIV+ FLRRE AR+RGE+  V+ FVE            PF ++   D  EI PGRP   DAYLRRRAYFDE +F+
Sbjct:   24 NASTPACSFPTHAS----SQPSPPAPLCFAQTVPRAH-VSYPCSAPTLATIPTTEPEEREEDVDNLN-QDDWLHPEEIHKPVCAALRLLIPPSKPIPVPKARPRARVTPVYSPPPLPDARPIVAHFLRRE-ARKRGEN--VESFVEPDVNYRRMQQPLPFDTSAFVDPDEIVPGRPETADAYLRRRAYFDEKDFF 209
The following BLAST results are available for this feature:
BLAST of Ggra4020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQM92.990e-2844.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:362472..363035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4020.t1Ggra4020.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 362472..363035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4020.t1 ID=Ggra4020.t1|Name=Ggra4020.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MQHSYINGRTGCLSYSAGATVVPCTQPDSSPAVCFAAPRTHSLPYASSAP
TLSPLDDDRVPYSDDRIQSDDCYSRTVQRLKLCIPRSKPIPVPRARPRAP
RPLASTPPLPDARPIVSRFLRREEARRRGESPFVDPFVEWGAGSDTASMY
NPFVSTNGQDAEITPGRPPREDAYLRRRAYFDEDEFY*
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