Ggra3969.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3969.t1
Unique NameGgra3969.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length681
Homology
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A2V3ISU6 (RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU6_9FLOR)

HSP 1 Score: 973 bits (2516), Expect = 0.000e+0
Identity = 512/608 (84.21%), Postives = 534/608 (87.83%), Query Frame = 0
Query:    1 METKGAVRQLTAATAELRVQDVASPPEKPPQKRNANGPSKG-----RGGSRYVPPHMRSRMLGMANNXXXXXXXXXXXXXXXXXXXXXXVDAGRTPSYGGRFGGGGRDXXXXGRSQRWSDEPRQRTWGDKGPSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPA-NTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFR 602
            ME  G + Q+TAATA+LRV+DVA  P +    +  N P+ G     R GSRYVPPH+R  ML MA+N                      V  GR  +YG RFGGG R+    GR QRWSDEPRQRTWGDKGPSSN   S S RWS+DDSPFAGKPDV+E+DIFNGMNTGINFDKYNDIPVEKSGTG  D+  I+SFEKSGLHIRLLKNI LAKYT+PTPVQKNAI I+SSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPP  N RPSRRRLVYPTALVLAPTRELASQIY+E+QKFCHSTGILARVVYGGADVRDQ+RQLERGCDLIVATPGRLVDMVERGRISLECV FLILDEADRMLDMGFEPQIRQIVE FYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTL+FVETKRGADALEEFLIR GYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFR
Sbjct:    1 MEANG-IAQVTAATADLRVKDVADKPTEKSTLQKKNNPAAGHTGKPRTGSRYVPPHLRKAML-MASNANAQGATTQPP-----------VQTGRAQAYG-RFGGGSREQ---GRQQRWSDEPRQRTWGDKGPSSNTSTSVSPRWSSDDSPFAGKPDVDEEDIFNGMNTGINFDKYNDIPVEKSGTGCADMVPIESFEKSGLHIRLLKNITLAKYTTPTPVQKNAIRIISSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPVLNNRPSRRRLVYPTALVLAPTRELASQIYDEAQKFCHSTGILARVVYGGADVRDQIRQLERGCDLIVATPGRLVDMVERGRISLECVRFLILDEADRMLDMGFEPQIRQIVETFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLIFVETKRGADALEEFLIRHGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFR 591          
BLAST of Ggra3969.t1 vs. uniprot
Match: R7Q7M9 (RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M9_CHOCR)

HSP 1 Score: 788 bits (2035), Expect = 7.400e-279
Identity = 421/583 (72.21%), Postives = 460/583 (78.90%), Query Frame = 0
Query:    7 VRQLTAATAELRVQDVASPPEKPPQKRNANGPSKGRG---GSRYVPPHMRSRMLGMANNXXXXXXXXXXXXXXXXXXXXXXVDAGRTPSYGGRFGGGGRDXXXXGRSQRWSDEPRQRTWGDKGPSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHS 586
            V  +TAA A+L +   A    K P    A+ P  G G   GSRYVPPH+RS+ML  A++                         G  P    R G GGR          WSD                 G++ SRWS DDSPF  + DV++ DIFNGMNTGINFDKYNDIPVE S  G+N +  I  F  SGLH+RLLKNIKLAKYT+PTPVQKNAIPI+++ RDLMACAQTGSGKTAAFLVPT+ RML MG PP PPAN R SRRR+VYPT LVLAPTRELASQIYEE+QKFCH +GILARVVYGGADVRDQ+RQL+RGCDLIVATPGRLVDMVERGRISLEC+ FLILDEADRMLDMGFEPQIRQIV+ FYLP KGERQTLMFSATFP+EIQQLASDFL+DYIFL VGRVGSTTDFIQQ+VEYCDE+SKRDMVLNLLNTI GLTLVFVETKRGAD+LE+FLIR  YPATSIHGDRSQ EREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLP++IDDYVHRIGRTGRAGNSGLATALIN+KNRNIVRDL ELL EAGQ+VPPFLT+MS  VS S
Sbjct:    6 VEDVTAAAAKLAIDGDA----KHPAPGGAHAPPAGNGPRSGSRYVPPHLRSKMLQSADSDPGDSAPPVSRPVPNHSNFQNRF--GGPPPGQFRGGSGGRG---------WSDSGPXXXXXXXXXXXXASGNTKSRWSNDDSPFGNQDDVDDKDIFNGMNTGINFDKYNDIPVEMS--GNNCVVAIADFPTSGLHVRLLKNIKLAKYTTPTPVQKNAIPIIAAGRDLMACAQTGSGKTAAFLVPTIDRMLAMGAPPQPPANQRSSRRRIVYPTGLVLAPTRELASQIYEEAQKFCHQSGILARVVYGGADVRDQLRQLDRGCDLIVATPGRLVDMVERGRISLECIRFLILDEADRMLDMGFEPQIRQIVDDFYLPAKGERQTLMFSATFPKEIQQLASDFLEDYIFLAVGRVGSTTDFIQQKVEYCDESSKRDMVLNLLNTIPGLTLVFVETKRGADSLEDFLIRQQYPATSIHGDRSQTEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPSDIDDYVHRIGRTGRAGNSGLATALINDKNRNIVRDLVELLGEAGQDVPPFLTEMSRFVSSS 571          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A1X6PHV7 (RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHV7_PORUM)

HSP 1 Score: 673 bits (1737), Expect = 1.350e-234
Identity = 348/498 (69.88%), Postives = 410/498 (82.33%), Query Frame = 0
Query:  118 RQRTWGDKGPSSNNPGSSSSRWSADDSPFAGK---PDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMS-EAVSHSGGRRRNGG-------RFGGRDFRKD 604
            +QR WGD    S  P +++ RW  DD PF  K    D    D+FNGMNTGINFDKY+DIPVE   TG+N    ++SF +SGLH R+++NIK+AKYT PTPVQKNA+ ++ + RDLMACAQTGSGKTAAFLVPT+H++L+  GPP PP++   SRR   +P+ LVLAPTRELASQIYEES+KFC+ TG+L  VVYGGA VRDQ+  +ERGCDLIVATPGRLVDM+ERG++SLEC+ FLILDEADRMLDMGFEPQIRQIV+   +PPK  R+TLMFSATFPREIQQLASDFLDDYIFL+VGRVGSTTDFI QR+EY ++  KRD+++ L+NT+ GLTLVFVETKRGAD+LE+FL+R+ YPATSIHGDRSQPERE+ALRSFRSGRTPI+VATDVAARGLDIPNVTHVINFDLP +IDDYVHRIGRTGRAGN+G+ATAL+NEKNRNI+ DL  LL+EAGQEVP FL  M+  A S +  R R          RFGGRD+RKD
Sbjct:   54 KQRVWGDL---SGTP-TTAKRWGEDD-PFHNKHAKDDAAAQDMFNGMNTGINFDKYDDIPVEM--TGTNCPVAVESFAESGLHQRVMENIKMAKYTKPTPVQKNAVGVILAGRDLMACAQTGSGKTAAFLVPTIHQLLKNSGPPQPPSSGGRSRRSS-FPSVLVLAPTRELASQIYEESRKFCYKTGVLPCVVYGGAGVRDQLYAMERGCDLIVATPGRLVDMIERGKVSLECIAFLILDEADRMLDMGFEPQIRQIVDQCGMPPKHIRRTLMFSATFPREIQQLASDFLDDYIFLSVGRVGSTTDFITQRIEYANDPDKRDLLIQLINTVMGLTLVFVETKRGADSLEDFLLRNNYPATSIHGDRSQPEREEALRSFRSGRTPILVATDVAARGLDIPNVTHVINFDLPKDIDDYVHRIGRTGRAGNTGMATALVNEKNRNIIPDLVNLLAEAGQEVPKFLESMAVHAGSSASSRTRXXXXXXXXXXRFGGRDYRKD 543          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A7S1XEY0 (RNA helicase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEY0_9RHOD)

HSP 1 Score: 659 bits (1699), Expect = 7.680e-229
Identity = 358/568 (63.03%), Postives = 416/568 (73.24%), Query Frame = 0
Query:   38 PSKGRGGSRYVPPHMRSRMLGMANNXXXXXXXXXXXXXXXXXXXXXXVDAGRTPSYGGR-FGGGGRDXXXXGRSQRWSDEPRQRTWGDKGPSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFRKD 604
            P KG+    Y+PPH+R+R                               +   P  GG  F GG        R+ RW D          GPS         RW  D SPF+ K +     +FNGMNTGINFD+Y++IP E S  G +    I++FEKSGLH RLLKNI LA YT PTPVQKNAI I+ + RDLM  AQTGSGKTAAFL+PTLH+MLEMG  P PP       RR+ YPT L+LAPTRELASQIY+ES+KFCH +GI   VVYGGAD+RDQ+RQ++RGCDLIVA PGRLVD++ERGRISLE + FLILDEADRMLDMGFEPQIRQIV+   +P KG RQTLMFSATFP+EIQ+LASDFL+DYIFL +GRVGSTTDFI+QRVE+ +E  KR+ VL LLN +SGLTLVFVETKRGADALE FLI+ GYPATSIHGDR+Q ERE ALRSF+ GRTPI+VATDVAARGLDIPNVTHVIN+D+PN+IDDYVHRIGRTGRAGN+GLATAL+NEKN+NI+RDL ELL EAGQE+PPFL  M+   +     R   GRFGGRD+R+D
Sbjct:    2 PPKGK----YIPPHLRNRPPPSVGPGAEPSSTAPPTTPATFRAESTQPSSSFHPPSGGTGFRGGFSRTHVEQRAPRWGDLE------SSGPSLEGT-RMGGRWGGD-SPFSKKSEPAPT-VFNGMNTGINFDRYDNIPAEVS--GRDPPPEIETFEKSGLHPRLLKNIVLANYTKPTPVQKNAISIICNGRDLMVSAQTGSGKTAAFLLPTLHKMLEMGARPQPPV-VEFGGRRVAYPTTLILAPTRELASQIYDESRKFCHFSGIQPVVVYGGADIRDQLRQIDRGCDLIVACPGRLVDLIERGRISLELIRFLILDEADRMLDMGFEPQIRQIVQDCGMPRKGSRQTLMFSATFPKEIQRLASDFLEDYIFLAIGRVGSTTDFIRQRVEFVEEPYKREFVLGLLNQVSGLTLVFVETKRGADALEMFLIQQGYPATSIHGDRTQQEREAALRSFKMGRTPILVATDVAARGLDIPNVTHVINYDVPNDIDDYVHRIGRTGRAGNNGLATALVNEKNKNILRDLLELLQEAGQEIPPFLHSMASFSAGGTSGRGRKGRFGGRDYRRD 553          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A5J4YNL2 (RNA helicase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNL2_PORPP)

HSP 1 Score: 632 bits (1631), Expect = 1.030e-218
Identity = 336/512 (65.62%), Postives = 395/512 (77.15%), Query Frame = 0
Query:  112 RWSDEPRQRTWGD-------KGPSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGR------------FGGRDFRKD 604
            R+     +R WGD       KG SS    S S RW  +++PFA    V + +IFNGMNTGINFDKY +IPVE SG    D   I+SFE S LH RL KN+ LAKYT PTPVQK A+PI+++ RDLMACAQTGSGKTAAFL+P L+RML MGGPP           R   PT+LVLAPTRELA QIYEES KFC+ TGI+ +VVYGGAD RDQ++Q++RGCD+IVATPGRLVDM++RGRISLE + FL LDEADRMLDMGFEPQIR+IVE   +P K +RQTLMFSATFPREIQQLASDFL+DYIFL+VGRVGSTTDFIQQR+E+  E  KRD +L+ LN++ GLTLVFVETKRGAD+LE FL + GYPATSIHGDRSQ ERE AL++FR+G TPIMVATDVAARGLDIPNVTHVIN+D+PN +DDYVHRIGRTGRAGNSGLATA +N+KNRN+ RDL E+LSE+GQE+P F+ +M+   ++ GG      R             G RDFRK+
Sbjct:   69 RYGGSAPKRVWGDLEEIAAAKGQSS----SGSGRW-GEENPFAESGKVVQVEIFNGMNTGINFDKYENIPVEVSGRDCPD--EINSFEDSELHTRLQKNVSLAKYTKPTPVQKRAVPIIAANRDLMACAQTGSGKTAAFLLPVLNRMLAMGGPPDS------FNHRAAEPTSLVLAPTRELAVQIYEESFKFCYKTGIVPQVVYGGADFRDQVKQMQRGCDVIVATPGRLVDMIQRGRISLERIRFLTLDEADRMLDMGFEPQIREIVEQCGMPRKEDRQTLMFSATFPREIQQLASDFLNDYIFLSVGRVGSTTDFIQQRLEFVREEDKRDFLLDELNSVPGLTLVFVETKRGADSLEYFLSQQGYPATSIHGDRSQQEREQALKTFRTGLTPIMVATDVAARGLDIPNVTHVINYDMPNSVDDYVHRIGRTGRAGNSGLATAFVNDKNRNLARDLLEILSESGQEIPAFIEQMA---AYGGGGXXXXXRRXXXXXXXXXXKIGSRDFRKE 564          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A7S3EMD9 (RNA helicase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMD9_9RHOD)

HSP 1 Score: 610 bits (1573), Expect = 4.590e-208
Identity = 341/593 (57.50%), Postives = 415/593 (69.98%), Query Frame = 0
Query:   20 QDVASPPEKPPQKRNANG--PSKGRGGSRYVPPHMRSRMLGMANNXXXXXXXXXXXXXXXXXXXXXXVDAGRTPSYGGRFGGGGRDXXXXGRSQRWSDEPRQRTWGDKG--PSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTP--PANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYC--DEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGG-RFGGRDFRK 603
            +D    P+  P KR  +   P+ G GG RY+PPH+R++  G A                         +             G       G ++R     ++R W D G  P S    +   R  AD        DV E        TGINF++YNDIPVE SG      + I+ F+ S LH R+LKNI LAKYTSPTPVQKNAIPI+ + RDLMACAQTGSGKTAAFLVPT+H M+ +GGPP P  P ++  S +RL YPT L++APTRELA QI+EE+ KF ++TGI+  VVYGG+D RDQ+RQL+RGCD++VATPGRLVD ++RG+ISLE V FLILDEADRMLDMGFEPQIRQIVE F +P   +RQTL+FSATFP+EIQ+LASDFL DYIFLTVGRVGSTT+FI QRVEY   ++  KR++V+ LLN + GLTLVFVETKRGAD LE+FL    YPATSIHGDRSQPER +ALRSFR+G TPI+VATDVAARGLDIPNV HVIN+D+PN+I+DYVHRIGRTGRAGN+GLATA++ +   N  RDL +LL+EAGQEVP FL  M+     S G++R GG R+GGRD R+
Sbjct:  125 EDTVDSPKVAPLKRTQSERTPASGSGG-RYLPPHLRNKEAGGATGEEGDMVRRKSAPLRSLTALIDNQEGAGVQRQNSLNRRGSDSNRAFGGTRRVGFGEKRREWKDHGDQPISRQNMNPFDRRHAD-------ADVPE------TQTGINFERYNDIPVEMSGRDCP--SAIEDFDSSNLHGRVLKNISLAKYTSPTPVQKNAIPIIQAARDLMACAQTGSGKTAAFLVPTIHLMMGIGGPPVPDYPPSSY-SSKRLYYPTVLIIAPTRELAVQIHEEACKFTYNTGIIPAVVYGGSDFRDQVRQLDRGCDILVATPGRLVDFLQRGKISLEYVKFLILDEADRMLDMGFEPQIRQIVEDFKMPFGTDRQTLLFSATFPKEIQRLASDFLHDYIFLTVGRVGSTTEFIVQRVEYAPDNDMQKRELVIELLNEVQGLTLVFVETKRGADLLEDFLCHRRYPATSIHGDRSQPERTEALRSFRTGLTPILVATDVAARGLDIPNVAHVINYDMPNDINDYVHRIGRTGRAGNNGLATAIVTDSKANTARDLVDLLAEAGQEVPQFLEGMARMSGRSSGKKRGGGNRWGGRDVRR 700          
BLAST of Ggra3969.t1 vs. uniprot
Match: M2XMV0 (RNA helicase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XMV0_GALSU)

HSP 1 Score: 596 bits (1537), Expect = 4.140e-204
Identity = 301/463 (65.01%), Postives = 368/463 (79.48%), Query Frame = 0
Query:  145 PFAGKPD--VEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGP-PTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFRKD 604
            PF G  +   +++DI  G  TGINFD Y+DIPVE SG+   D   + SF++S LH R+L N+KL+ Y  PTPVQKNAIP++ + RD+MACAQTGSGKTAAFL+PT+H ML+MGGP P P         ++ +PT LVLAPTRELA QIY+E++KFC+ TGI+  V+YGG ++R Q   + +GCD++VATPGRLVDM+ERG+ISL  + FLILDEADRMLDMGFEPQIRQIVE   +P  GERQTLMFSATFP+EIQ+LASDFL DYIFL VGRVGSTTDFI QR+E  +E  KRD +LNL++T+SGLTL+F++TKRGAD LE FL R GYPA SIHGDRSQ ERE+AL SFR+GRTPI+VATDVAARGLDIPNVTHV+NFD+P ++DDYVHRIGRTGRAGNSGLATA +N+ N  I R L ++L E+GQEVP +L  M+E    +  RR   GRFGG+DFR++
Sbjct:  125 PFKGNENNHFQDEDIEPGTTTGINFDHYDDIPVEISGSDCPD--EVLSFDESNLHSRILTNVKLSNYLKPTPVQKNAIPVILNGRDMMACAQTGSGKTAAFLLPTIHNMLKMGGPAPVPEKPLDRGYSKIQFPTTLVLAPTRELAMQIYQEARKFCYCTGIIPCVIYGGINIRIQFESVAKGCDILVATPGRLVDMIERGKISLMNIKFLILDEADRMLDMGFEPQIRQIVERTDMPTTGERQTLMFSATFPKEIQRLASDFLYDYIFLAVGRVGSTTDFILQRLERVEEHEKRDFLLNLIDTVSGLTLIFMQTKRGADELEYFLTRKGYPAISIHGDRSQVEREEALHSFRTGRTPILVATDVAARGLDIPNVTHVVNFDMPTDVDDYVHRIGRTGRAGNSGLATAFLNDNNIGIARSLIDILIESGQEVPIWLEDMAERAQMNA-RRGGRGRFGGKDFRRE 584          
BLAST of Ggra3969.t1 vs. uniprot
Match: M1VI36 (ATP-dependent RNA helicase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VI36_CYAM1)

HSP 1 Score: 593 bits (1529), Expect = 7.420e-203
Identity = 306/456 (67.11%), Postives = 368/456 (80.70%), Query Frame = 0
Query:  156 DIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTR----PSRRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGAD-VRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEA-VSHSG-GRRRNGGRFGGRDFRKD 604
            ++FNG NTGINFDKY+DIPVE S  G N +  I SFE SG+   LL+N+ L+ Y  PTPVQ++AIP V + RDLM+CAQTGSGKTAAF++P LH+ML MGGP  PP+++      SR R  YPT L+LAPTRELASQI+ E +KFC+ T I A V+YGG++  R+Q+R +E   D++VATPGRL+D ++RGRI L  V FL LDEADRMLDMGFEPQIRQIVE   +P  G+RQTLMFSATFPREIQ+LASDFL DYIFL VGRVGSTTDFI QR+E+C++  KR+M+L+LLN+I GLTLVFV+TKR ADALE+FL+R GY A+SIHGDRSQ ERED+L +FRSG+TPI+VATDVAARGLDIPNV HV+N++LP  IDDYVHRIGRTGRAGN G+AT+  NEKNR IVRDL ELL EAGQEVP +L  M +A V+ SG GR   GGRFGGRD R++
Sbjct:  137 ELFNGQNTGINFDKYDDIPVEVS--GENVVPEIMSFETSGMDKILLRNVALSGYRKPTPVQRHAIPTVMAGRDLMSCAQTGSGKTAAFVLPVLHQMLLMGGPAPPPSSSGVGGISSRSRCSYPTYLILAPTRELASQIFSECRKFCYGTSIRAAVIYGGSENTREQLRAVENQVDIVVATPGRLLDFIDRGRIHLANVRFLTLDEADRMLDMGFEPQIRQIVENCDMPAAGQRQTLMFSATFPREIQRLASDFLHDYIFLAVGRVGSTTDFIVQRIEFCEDHLKREMLLDLLNSIPGLTLVFVDTKRAADALEDFLLRHGYAASSIHGDRSQREREDSLAAFRSGQTPILVATDVAARGLDIPNVAHVVNYELPAAIDDYVHRIGRTGRAGNQGIATSFANEKNRGIVRDLIELLQEAGQEVPSWLYTMCQAPVARSGSGRAGRGGRFGGRDMRRE 590          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A7S3E9E9 (RNA helicase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9E9_9RHOD)

HSP 1 Score: 589 bits (1519), Expect = 3.310e-199
Identity = 315/509 (61.89%), Postives = 382/509 (75.05%), Query Frame = 0
Query:   97 FGGGGRDXXXXGRSQRWSDEPRQRTWGD-KGPSSNNPGSSSSRWSADDSPFAGKPDVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPSRR-RLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRDFRK 603
            FG GGR         R   +  +RTWGD +     N G         + PF  +   E  D    M+ GINFDKY++IPVE SG   ND   ++SFE+S LH RLLKN+ LA Y+ PTPVQ+N+IPIV  +RDLMACAQTGSGKTAAFL+P +HRMLEMG PP  P + R   R    YPT LVLAPTRELA QI+EE+ KF + +GI + VVYGGA  R Q+ ++  GCDL+VATPGRLVDMVERG +S+E + FLILDEADRMLDMGFEPQIR IV+   +P + ERQTLMFSATFP+EIQ+LA+DFL DY FLTVGRVGSTTD I Q+V+ C +  K ++V++LL +I+GLTLVFVETK+GAD LE  L R G+PATSIHGDRSQ ER +AL +FR G  PI+VATDVAARGLDIPNVTHVIN+DLP++IDDYVHRIGRTGRAGN+G+ATAL+NEKNRNI  DL +LL+EA QEVP +L  M+++ S  GG++R   RFGG+D+RK
Sbjct:  213 FGSGGRGNYNRHYGSRRYPDREKRTWGDLENTGYRNRG---------EDPFWRRK--ENVDAVLEMSAGINFDKYDEIPVEVSGI--NDHHHLESFEQSNLHPRLLKNVGLAGYSKPTPVQRNSIPIVVRERDLMACAQTGSGKTAAFLLPVIHRMLEMGVPPAIPEDIRQGNRPETAYPTVLVLAPTRELAVQIHEEAGKFSYFSGIESCVVYGGAQFRSQLNEVRLGCDLLVATPGRLVDMVERGTLSMEMIQFLILDEADRMLDMGFEPQIRNIVQRMGMPGRTERQTLMFSATFPKEIQRLAADFLGDYAFLTVGRVGSTTDSIIQKVKLCPDDRKPELVIDLLGSIAGLTLVFVETKKGADILERMLTRQGFPATSIHGDRSQDERLEALHAFRVGLRPILVATDVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATALVNEKNRNIASDLVDLLTEAQQEVPSWLKSMTKSSSSGGGKKRYNSRFGGKDYRK 708          
BLAST of Ggra3969.t1 vs. uniprot
Match: A0A7J7IR19 (RNA helicase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IR19_9RHOD)

HSP 1 Score: 555 bits (1430), Expect = 2.180e-190
Identity = 285/423 (67.38%), Postives = 340/423 (80.38%), Query Frame = 0
Query:  190 SFEKSGLHIRLLKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHRMLEMGGPPTPPANTRPS----RRRLVYPTALVLAPTRELASQIYEESQKFCHSTGILARVVYGGAD-VRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNFLILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLASDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTLVFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIMVATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALINEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAV---SHSGGRRRNGGRFGGRDFRKD 604
            +FE SG+   LL+N+ L+ Y  PTPVQ++AIP V + RDLM+CAQTGSGKTAAF++P LH+ML+MGGP   P+    S    R R  YPT L+LAPTRELASQI+ E +KFC+ TGI A V+YGG++  R+Q+R +E   D++VATPGRL+D +ERGRI L  V FL LDEADRMLDMGFEPQIRQIVEA  +P  GERQTLMFSATFPREIQ+LASDFL DYIFL VGRVGSTTDFI QR+E+C++  KR+M+L+LLN+I GLTLVFV+TKR ADALE+FL+R GY A+SIHGDRSQ EREDAL +FRSG+TPI+VATDVAARGLDIPNV HV+N++LP+ IDDYVHRIGRTGRAGN G+AT+  NEKNR IVRDL ELL EAGQEVP +L  M +     S   GR   GGRFGGRD R++
Sbjct:    2 TFETSGMDKILLRNVALSGYRKPTPVQRHAIPTVMAGRDLMSCAQTGSGKTAAFVLPVLHQMLQMGGPAPAPSTGSTSGLSSRFRCSYPTYLILAPTRELASQIFSECRKFCYGTGIRAAVIYGGSENTREQLRAVENQVDIVVATPGRLLDFIERGRILLANVRFLTLDEADRMLDMGFEPQIRQIVEACDMPVIGERQTLMFSATFPREIQRLASDFLHDYIFLAVGRVGSTTDFIVQRIEFCEDHLKREMLLDLLNSIPGLTLVFVDTKRAADALEDFLLRHGYAASSIHGDRSQREREDALAAFRSGQTPILVATDVAARGLDIPNVAHVVNYELPSTIDDYVHRIGRTGRAGNQGIATSFANEKNRGIVRDLIELLQEAGQEVPSWLYTMCQGPAMRSGGSGRPGRGGRFGGRDMRRE 424          
The following BLAST results are available for this feature:
BLAST of Ggra3969.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISU60.000e+084.21RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7Q7M97.400e-27972.21RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 R... [more]
A0A1X6PHV71.350e-23469.88RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A7S1XEY07.680e-22963.03RNA helicase n=1 Tax=Compsopogon caeruleus TaxID=3... [more]
A0A5J4YNL21.030e-21865.63RNA helicase n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A7S3EMD94.590e-20857.50RNA helicase n=2 Tax=Rhodosorus marinus TaxID=1019... [more]
M2XMV04.140e-20465.01RNA helicase n=1 Tax=Galdieria sulphuraria TaxID=1... [more]
M1VI367.420e-20367.11ATP-dependent RNA helicase n=1 Tax=Cyanidioschyzon... [more]
A0A7S3E9E93.310e-19961.89RNA helicase n=2 Tax=Rhodosorus marinus TaxID=1019... [more]
A0A7J7IR192.180e-19067.38RNA helicase n=1 Tax=Cyanidiococcus yangmingshanen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 460..541
e-value: 5.1E-36
score: 135.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 434..541
e-value: 9.1E-31
score: 106.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 437..580
score: 23.983185
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 208..425
e-value: 7.3E-63
score: 224.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 220..410
score: 31.999416
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 412..584
e-value: 5.2E-58
score: 197.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 148..411
e-value: 6.2E-83
score: 279.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 275..560
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 213..399
e-value: 3.0E-50
score: 170.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..157
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 112..614
NoneNo IPR availablePANTHERPTHR47958:SF62DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1coord: 112..614
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 422..550
e-value: 2.4394E-61
score: 198.885
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 352..360
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 189..217
score: 10.624951
IPR044763Ded1/Dbp1, DEAD-box helicase domainCDDcd17967DEADc_DDX3_DDX4coord: 190..416
e-value: 4.39138E-152
score: 437.304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:243225..245267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3969.t1Ggra3969.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 243225..245267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3969.t1 ID=Ggra3969.t1|Name=Ggra3969.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=681bp
METKGAVRQLTAATAELRVQDVASPPEKPPQKRNANGPSKGRGGSRYVPP
HMRSRMLGMANNANNAPQPAATGATGATVASVASVDAGRTPSYGGRFGGG
GRDGGRDGRSQRWSDEPRQRTWGDKGPSSNNPGSSSSRWSADDSPFAGKP
DVEEDDIFNGMNTGINFDKYNDIPVEKSGTGSNDITGIDSFEKSGLHIRL
LKNIKLAKYTSPTPVQKNAIPIVSSKRDLMACAQTGSGKTAAFLVPTLHR
MLEMGGPPTPPANTRPSRRRLVYPTALVLAPTRELASQIYEESQKFCHST
GILARVVYGGADVRDQMRQLERGCDLIVATPGRLVDMVERGRISLECVNF
LILDEADRMLDMGFEPQIRQIVEAFYLPPKGERQTLMFSATFPREIQQLA
SDFLDDYIFLTVGRVGSTTDFIQQRVEYCDEASKRDMVLNLLNTISGLTL
VFVETKRGADALEEFLIRSGYPATSIHGDRSQPEREDALRSFRSGRTPIM
VATDVAARGLDIPNVTHVINFDLPNEIDDYVHRIGRTGRAGNSGLATALI
NEKNRNIVRDLTELLSEAGQEVPPFLTKMSEAVSHSGGRRRNGGRFGGRD
FRKDGGSGGGRHNRSNYGNYSGGGGGYGFGNSYGGGGYGGGGYGGGGGGY
GGGGGGYGGGGSYGGGGSGGSYQNGSGSNW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR044763Ded1/Dbp1_DEADc