Ggra3923.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3923.t1
Unique NameGgra3923.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length258
Homology
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A7S0BLS4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLS4_9RHOD)

HSP 1 Score: 158 bits (400), Expect = 3.320e-44
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   78 WAQRQHHVERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQHDTHSLWSTIMRMI 256
            WA   + +E G  L++   ++W     H + AV+L+T    T   GL+LNR     V    S+ ARVG  F DN VHLGGDCS G++E++HS+ P  C GA E+VPG+++GGFNASR+L++     P++FRF + Y+QW  + LR E+    W  V+CS +LLL      LW  ++ ++
Sbjct:   61 WAHEVNVIEPGTCLISNANHQWSETHKHRNKAVVLVTKATDTEFTGLMLNRELGQYVHDIPSIEARVGREFRDNPVHLGGDCSLGTIEMIHSVRPERCAGAEEIVPGLYKGGFNASRELIQDRIADPSSFRFLLGYTQWKTEDLRREIKNRVWHQVACSTNLLLAGTGEQLWHDVLSLV 239          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A7R9VHZ6 (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VHZ6_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 1.630e-21
Identity = 72/232 (31.03%), Postives = 111/232 (47.84%), Query Frame = 0
Query:   32 SAAPAGMPTPSETP---STPDWRAFRAQLSVQHRLNQTPTHHSSAELMHWAQRQHHVERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSL--LLQHDTHS--LWSTIMRMI 256
            S  P+    P   P   +  DWR FRA+L  Q R           +   WA      E+G +L+A P   +  +  +   +VIL+ D   +G CG++LNRP+ YT+   +  L +    F +  + +GGD   G+L+++H+       G+ EVV GV  GG  A+R  V +G    + FR+F  YS W    L  E   G W T + SP L  LL  D++    W  I++++
Sbjct:  134 SCEPSSSSVPDRLPILGADTDWRQFRARLVAQER---------GTDSSQWAHPISQPEKGSLLLAHP-MMFTNSQQYFYQSVILLLDHDESGSCGVILNRPSQYTLG--QLALTKELAEFDNCRLFIGGDVGDGTLQLVHTTDGLA--GSVEVVKGVHLGGIEAARNKVATGEAPADDFRWFARYSGWGAGQLEGECRAGVWFTAAASPELIKLLPKDSNGRDYWHQILQLM 351          
BLAST of Ggra3923.t1 vs. uniprot
Match: C1E5G6 (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E5G6_MICCC)

HSP 1 Score: 101 bits (252), Expect = 2.000e-21
Identity = 69/214 (32.24%), Postives = 103/214 (48.13%), Query Frame = 0
Query:   49 DWRAFRAQLSVQHRLNQ--------TPTHHSSAELMH-----------WAQRQHHVERG-VVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQ 242
            DWR FRA L  Q +                 + EL+            WA R    E+G ++L AA E+     + H   AVIL+ +    G  G++LNRPT Y + +   V  +    F++N ++ GGD   G++  LH        G+AEV+PGV+ GG++++ +LVK      N F+FF  Y  W    L+ E +RG W  V+CS  L L+
Sbjct:  127 DWRDFRAMLISQEKGKDELVDDDEIAAASGPNLELLRKQNPKLAKDKPWAHRIGAPEKGCLLLAAADEFTLGQQYFH--QAVILLLEHHDKGSMGVILNRPTQYNMGY---VSGQSDGPFAENALYFGGDVGDGTVSFLHG--SDKVQGSAEVLPGVYLGGYDSACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALK 333          
BLAST of Ggra3923.t1 vs. uniprot
Match: I0YXN7 (DUF179-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YXN7_COCSC)

HSP 1 Score: 95.9 bits (237), Expect = 4.770e-20
Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 0
Query:   78 WAQRQHHVERGVVLVAAP-EYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQ 242
            WA   +  E+G +L+A P  +  Q  +   + AVI I +    G  GL+LN+PT YT+    S L  + P F++N + LGGD S  S+ +LH       P A E++ G+  GGF+A++  V  G      F++F  YS W    L+ E   G W T + S +L+LQ
Sbjct:   40 WAHSINFPEKGCLLIAHPLVFTTQQQY--FAQAVIFIFEHSEQGSAGLILNKPTQYTIGT-MSGLEALCPEFNNNGLFLGGDVSPNSMHMLHC--HGQLPEAVEIIRGINMGGFDAAKAAVSQGRMPATDFKWFTRYSGWGAGQLQRECASGVWFTAAASSALVLQ 200          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A2P6TF74 (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TF74_CHLSO)

HSP 1 Score: 96.3 bits (238), Expect = 1.200e-19
Identity = 71/226 (31.42%), Postives = 108/226 (47.79%), Query Frame = 0
Query:   29 PRLSAAPAGMPTPSETPSTPDWRAFRAQLSVQHRLNQTPTHHSS-AELMH-----------WAQRQHHVERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQ 242
            P  SA P  +P  +   +  DWRAFRA+L    + +      +S AE              WA      E+G +L+A+P   +  +  + + AVILI      G  G++LNRPT Y V    +  A + P  S   ++LGGD    S+ +LH +       +AEV+PGVF GGF  ++Q +  G  +P  F+    Y+ W    L AE  RG W++VS +   + +
Sbjct:   73 PESSAIPDTLPLAT---ADSDWRAFRAKLVASSKASVAAADEASDAEGXXXXXXAGTADAPWAHSLLGPEQGCLLLASP-LMFATSQQYFNMAVILIFAHDEKGSAGIILNRPTEYKVGDLGAGAASLQPELSPCTLYLGGDVGQESVHLLHGVRG--LQQSAEVIPGVFLGGFEGAKQGLAEGRYKPEQFKVLTRYAGWGPGQLAAECRRGVWLSVSANKHAIFR 292          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A7S0D198 (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D198_MICPS)

HSP 1 Score: 92.8 bits (229), Expect = 3.970e-18
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 0
Query:   86 ERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQ 242
            ERG +LVA  +   Q    +   AVIL+ +    G  G++LNRPT Y++ +        GP F+ N ++ GGD   G++  LH    S   G+ EV  GVF GG+ ++ +LVK+G  + N  +FF  Y  W    L++E +RG W  V+CS  + L+
Sbjct:  195 ERGCLLVARGDNFTQGQQ-YFHQAVILMLEHNEKGSMGVILNRPTQYSMGYVSG--DESGP-FAQNALYFGGDVGDGTVSFLHG--SSSVTGSVEVSAGVFLGGYESACELVKTGEVEANDCKFFARYCGWGPGQLQSECERGVWYPVACSKQIALK 345          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A2P6VRK5 (Sorbosone dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRK5_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 3.510e-17
Identity = 70/208 (33.65%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   46 STPDWRAFRAQLSVQHRLNQT------PTHHSS----AELMHWAQRQHHVERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCP--GAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLL 241
            S  DWRAFRAQL        T      P   +S    A    WA      E+G +L++ P   +Q +  +   AVILI      G  GL+LNRPT YTV       A + P FS   ++LGGD    S+ +LH     +C    + EVV GV  GGF  +++ ++ G    + F+    Y  W    L  E  RG W+ VS S + +L
Sbjct:   66 SDTDWRAFRAQLVASAAAAATAGSKAEPAAAASLAPAAAGQPWAHSLRAPEQGCLLLSNP-LMFQTSQSYFHMAVILIFTHGPDGAAGLILNRPTEYTVGEMGQGAANLQPEFSPCRLYLGGDVGGDSVNLLHG----ICGLRDSLEVVSGVHLGGFLEAKRGLEEGRFSADQFKVLTRYCGWGPGQLEMECARGVWMPVSASKAAIL 268          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A1Y1HNY0 (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HNY0_KLENI)

HSP 1 Score: 82.4 bits (202), Expect = 1.470e-14
Identity = 56/158 (35.44%), Postives = 81/158 (51.27%), Query Frame = 0
Query:  108 HAVILITDVCATGVCGLLLNRPTNYTV-----RHHRSVLARVGPHFSDNVVHLGGDCSTG-SLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQHDTH---SLWSTIMRMI 256
             AV+ + +    G  GLLLNRP+ YT+     R +++  +R+   FS   +++GG  S G SL VLH       PGA E+ PGVF GG + +   V  G   P  FRFFV   +W    L+ E    +W T +CS SL+L+        LW  I+ ++
Sbjct:  184 QAVVFLIEHGPRGSWGLLLNRPSGYTIGQALPRMNQTHGSRLLTVFSVCPIYVGGFKSDGRSLYVLHG---HSLPGAEEIAPGVFLGGLDVAATGVLEGKFPPTDFRFFVGRVEWLPGGLKQECTAESWYTAACSKSLVLKQCIQLPKPLWQEILELM 338          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A7I4F0M2 (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4F0M2_PHYPA)

HSP 1 Score: 65.5 bits (158), Expect = 7.080e-9
Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 0
Query:   49 DWRAFRAQLSVQHRLNQ---TPTHHSSAELMHWAQRQHHVERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYS 214
            DWRAFRA+L V+  L             EL  WA      E G +L+A P   +  +  +    VI I    A G  G++LNRPT Y++         + P  S   ++ GGD      +V+H +P      + E++ GV+ GG  + +  ++SG   PN +R+F+ ++
Sbjct:  106 DWRAFRARL-VRSGLGTGGLDSVQDEEREL--WAHPIVQPEPGCLLIAHPN-AFTESQQYFHRVVIFIFAHDAGGSAGVILNRPTQYSLGQ-LDEFKDLMPELSSCPLYFGGDVGPQCTQVIHGIPG--LEDSREIMNGVYMGGTASIQDNIRSGQSTPNDYRWFLRFA 267          
BLAST of Ggra3923.t1 vs. uniprot
Match: A0A7S3A8Q3 (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8Q3_9RHOD)

HSP 1 Score: 65.5 bits (158), Expect = 7.880e-9
Identity = 42/176 (23.86%), Postives = 83/176 (47.16%), Query Frame = 0
Query:   86 ERGVVLVAAPEYRWQPAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSDNVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSGSQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQH-----DTHSLWSTIMRMI 256
            E G +L+A P++  +    +  HAVIL+      G  G+++N+     ++     ++      S+N ++ GGD    ++  +H          AEV+PGVF GG+    +  + G+  P   + F+ Y  W    L+ E+++  WI  +CS  ++L       D+ + W  + +++
Sbjct:  115 EPGCLLLANPKFFGENQV-YFRHAVILLLQSDENGAHGIIINKRMKTQLKS----MSTEPNALSNNRIYFGGDVGE-TMFFIHDYTD--LRNTAEVLPGVFCGGYEEILEAAERGTINPERVKVFLRYCGWAPQQLQDEIEKKVWIPAACSKEVVLSAHVDIADSEAFWRKLYKLM 282          
The following BLAST results are available for this feature:
BLAST of Ggra3923.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A7S0BLS43.320e-4440.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7R9VHZ61.630e-2131.03Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
C1E5G62.000e-2132.24Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
I0YXN74.770e-2034.94DUF179-domain-containing protein n=1 Tax=Coccomyxa... [more]
A0A2P6TF741.200e-1931.42Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A7S0D1983.970e-1835.67Hypothetical protein n=2 Tax=Micromonas pusilla Ta... [more]
A0A2P6VRK53.510e-1733.65Sorbosone dehydrogenase n=1 Tax=Micractinium condu... [more]
A0A1Y1HNY01.470e-1435.44Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7I4F0M27.080e-929.59Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A7S3A8Q37.880e-923.86Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003774Protein of unknown function UPF0301PFAMPF02622DUF179coord: 106..255
e-value: 1.8E-23
score: 83.3
NoneNo IPR availableGENE3D3.40.1740.10coord: 84..257
e-value: 4.6E-35
score: 122.6
NoneNo IPR availablePANTHERPTHR31984TRANSPORTER, PUTATIVE (DUF179)-RELATEDcoord: 48..256
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 85..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:105319..106092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3923.t1Ggra3923.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 105319..106092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3923.t1 ID=Ggra3923.t1|Name=Ggra3923.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bp
MTAAAFVNPTPLLAARKRVERRMCRRALPRLSAAPAGMPTPSETPSTPDW
RAFRAQLSVQHRLNQTPTHHSSAELMHWAQRQHHVERGVVLVAAPEYRWQ
PAFCHLSHAVILITDVCATGVCGLLLNRPTNYTVRHHRSVLARVGPHFSD
NVVHLGGDCSTGSLEVLHSLPPSVCPGAAEVVPGVFRGGFNASRQLVKSG
SQQPNAFRFFVAYSQWTWDTLRAEMDRGAWITVSCSPSLLLQHDTHSLWS
TIMRMIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003774UPF0301