Ggra3842.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3842.t1
Unique NameGgra3842.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length249
Homology
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A7S0FZX8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZX8_9RHOD)

HSP 1 Score: 159 bits (402), Expect = 7.500e-45
Identity = 84/216 (38.89%), Postives = 129/216 (59.72%), Query Frame = 0
Query:   38 NDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQY---LN-DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEV--HAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPLCF 247
            +DDS    +GIGTH+D L H   +  +Y GH+  E++   G++++G AE V   +A   +LDMA Y  ++ +  G  +  +DIE AAK AG+  + G +VLL +G+ ++    N + E+FN  EPG G++A   L+    +++AAD   +EV    PG    +PVH  L++E+G+ +GE+F+L EL +D VTQGTI I +  I G  Q R NP  F
Sbjct:   13 HDDSLQIHVGIGTHIDTLSHIGHNGEFYGGHTSEELFDKGGVKIMG-AETVSNIVAPCVILDMAKYLNMDSIPAGTVFGKSDIENAAKEAGVSISQGSVVLLHTGWIEHGWGANVNKELFNSGEPGIGMEAGKYLSDSGVVLVAADNWAVEVIPAEPGTTVGFPVHKALLKERGVLLGEMFDLRELVKDGVTQGTISIQVVAIKGAVQSRVNPQVF 227          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A2E6Y020 (Polyketide cyclase n=1 Tax=Stappia sp. TaxID=1870903 RepID=A0A2E6Y020_9HYPH)

HSP 1 Score: 138 bits (347), Expect = 1.240e-35
Identity = 80/214 (37.38%), Postives = 118/214 (55.14%), Query Frame = 0
Query:   37 FNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEVHAPGLWTD-YPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPL 245
            +NDD     LGIG  +DGLGH   D+ YY GH  ++     G+  LGL  N+P  + R  +LDMA +YGV++V+ G  Y++ D++ AAK  G+    GDIVL  S +   L+    DP+ F  +EPG G+  A  LA+   + + ADT G+EV    +  D +  H  L  E GIYI E  +  ELA+D+  +   V+   ++ G  Q+  NP+
Sbjct:  105 YNDDIFMGWLGIGPQIDGLGHAGVDHVYYNGHKDSDFAKAAGLXELGL-HNLPGLVGRGVLLDMAKFYGVDMVEEGTAYTADDVKAAAKQQGVELREGDIVLFNSNWMNLLDGENPDPKRFGAAEPGLGVSGAEYLAELGVMAVGADTWGMEVVPAEVEGDAFRAHQILQPENGIYILENMDTRELAKDEAHEFLFVLGQARLKGAVQMIINPI 317          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A5C7Q507 (Cyclase family protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7Q507_9BURK)

HSP 1 Score: 136 bits (343), Expect = 4.220e-35
Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 0
Query:   32 PDSTVFNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN-DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEV----HAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNP 244
            P  T +NDD  N  +GIG+ +DGLGH    +TY+ G+   E+    G++ LG   N+P  + R  +LDMAAYYGV++V  G  +++ +IE AA+  G+    GD+VL  +G+   ++ DP+ +   EPG G D A  L  K  + + ADT GLE        G+   + VH  L+   G YI E  N  ELA+DK  +   V+   +  G  Q   NP
Sbjct:   97 PTKTTYNDDILNCWVGIGSQLDGLGHIGVGDTYFNGNKWNEIGQMGGLKKLG-THNIPPMVTRGVLLDMAAYYGVDVVKEGTAFNTKEIEEAARRQGVTIRQGDVVLFHTGWLSLIDKDPKRYGSVEPGLGRDGARYLVSKGVVAVGADTWGLEPIPFEQGAGV---FEVHQILLPLSGTYILENMNTAELAKDKAWEFMFVLGQNKYQGAVQSMINP 310          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A327XTK3 (Kynurenine formamidase n=2 Tax=Salipiger aestuarii TaxID=568098 RepID=A0A327XTK3_9RHOB)

HSP 1 Score: 136 bits (343), Expect = 6.670e-35
Identity = 84/214 (39.25%), Postives = 112/214 (52.34%), Query Frame = 0
Query:   37 FNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEVHAPGLWTD-YPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPL 245
            +NDD     LGIG  +DGLGH   D+ YY G    +     G+  LGL + +P  + R  MLDMAAYYGV++V  G  Y+  DI GAA+A G+    GD+VL  S +   L+    DPE F   EPG G+  A  L +   + + ADT G+EV       D + VH  L  E GIYI E  +   LA D V +   V+   +I G  Q+  NP+
Sbjct:  120 YNDDIFMGWLGIGPQIDGLGHAGVDHVYYGGRHYDDFAPASGLTELGL-DKLPGLVGRGVMLDMAAYYGVDMVQEGTPYTEEDIRGAAEAQGVELREGDVVLFNSNWMDLLDGDAPDPERFGAQEPGVGVSGAEYLTELGVMAVGADTWGMEVVPAETEGDAFRVHQILQPEHGIYILENMDTRALADDGVHEFLFVLGQARIKGAVQMIINPI 332          
BLAST of Ggra3842.t1 vs. uniprot
Match: cyclase family protein n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001AD8F535 (cyclase family protein n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001AD8F535)

HSP 1 Score: 135 bits (341), Expect = 8.330e-35
Identity = 84/214 (39.25%), Postives = 118/214 (55.14%), Query Frame = 0
Query:   37 FNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEVHAPGLWTD--YPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNP 244
            +NDD     LGIG  +DGLGH    +TYY G +  EV   +G+  LGL E +P  + R  +LDMAA+YG +IV+ G  Y+  DI  AA+A G+    GD+VL  SG+   L+    D E +   EPG G+  A  LA+   +   ADT GLE       +D  + VH  L+ + GIYI E  +  ELA+DK  +   V+ +T++ G  Q+  NP
Sbjct:   98 YNDDIFMGWLGIGPQIDGLGHIGIKHTYYNGFAGAEVAKADGLAKLGL-EKLPPIVTRGVLLDMAAFYGQDIVEEGTPYTREDIISAAEAQGVELKKGDVVLFHSGWLNLLDGENPDHERYVKVEPGLGISGAEYLAEVGVVAAGADTWGLEAVPFEKGSDGVFAVHQILIPQNGIYILENMDTRELAKDKAYEFMFVLGVTRMKGAVQMMINP 310          
BLAST of Ggra3842.t1 vs. uniprot
Match: cyclase family protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI0016775E21 (cyclase family protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI0016775E21)

HSP 1 Score: 135 bits (339), Expect = 1.680e-34
Identity = 83/217 (38.25%), Postives = 118/217 (54.38%), Query Frame = 0
Query:   33 DSTVFNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLE-VHAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNP 244
            ++  +NDD     LGIG  +DGLGH   D+ YY G   ++    +G++ LG+ E +P  + R  +LDMAAYYGV++V  G  Y+  DI GAAK  G+    GD+VL  S +   L+    D + +  SEPG G   A  LA+   + + ADT GLE V  P     + VH  L+ + GI+I E     ELARDK  +   V+  T++ G  Q+  NP
Sbjct:   96 NAMTYNDDIFMGWLGIGPQIDGLGHIGIDHVYYNGLKDSDFAKADGLKKLGI-EKLPPIVTRGVLLDMAAYYGVDLVKEGTPYTKEDIVGAAKKQGVEIRKGDVVLFHSNWLTLLDEGTRDAKRYGSSEPGLGKSGAEYLAEIGVVAVGADTWGLEAVPFPEGTGVFEVHQILIPKNGIFILENMETRELARDKAYEFMFVLGPTRMRGAVQMMINP 311          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A254RDL1 (Polyketide cyclase n=2 Tax=Oceanicola sp. 22II-s10i TaxID=1317116 RepID=A0A254RDL1_9RHOB)

HSP 1 Score: 134 bits (337), Expect = 3.030e-34
Identity = 83/219 (37.90%), Postives = 118/219 (53.88%), Query Frame = 0
Query:   32 PDSTVFNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEV--HAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNP 244
            P +T +NDD     LGIG+ +DGLGH   D+ YY GH+  +    +G+  LG+ E VP  +AR  +L+MA +YG +I+D G  Y+  DI  AA+  G+    GD+VL  SG+   L     D + +   EPG G   A  L +K  + I ADT GLE      G+   + VH  L+ + GIYI E    EE+A D VT+   V+   ++ G  Q+  NP
Sbjct:   91 PTNTTYNDDIFMGWLGIGSQIDGLGHIGVDHVYYNGHNDKDFVMGDGMTKLGI-EKVPPIVARGVLLNMAKFYGKDILDEGTAYTREDITAAAEQQGVEIRDGDVVLFHSGWLDLLKEETRDAKRYGSVEPGLGKTGAEYLVEKGVIAIGADTWGLEAVPFEEGVGV-FEVHQILLAKNGIYILENMVTEEMAADGVTEFMFVLGQAKVRGAVQMIINP 307          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A1X4IUZ3 (Polyketide cyclase n=2 Tax=Pseudoruegeria sp. SK021 TaxID=1933035 RepID=A0A1X4IUZ3_9RHOB)

HSP 1 Score: 134 bits (336), Expect = 4.060e-34
Identity = 85/214 (39.72%), Postives = 114/214 (53.27%), Query Frame = 0
Query:   37 FNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEV-HAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPL 245
            +NDD     LGIG  +DGLGH   D+ YY G +  +     G+  LGL E +P  + R  MLDMAAY+GV++V  G  Y++ DI GAAKA G+    GD+VL  S +   L+    DP  F   EPG G+  A  LA+   + + ADT G+EV  A      + VH  L  E GIYI E  +   LA D V +   V+   +I G  Q+  NP+
Sbjct:   94 YNDDIFMGWLGIGPQIDGLGHAGVDHVYYGGRTYDDFAPASGLTELGL-EKLPGLVGRGVMLDMAAYFGVDMVLEGTAYTADDIRGAAKAQGVELREGDVVLFNSNWMDLLDGDAPDPVRFGALEPGVGVSGAEYLAEIGVMAVGADTWGMEVVPAETEGEAFRVHQILQPEHGIYILENMDTRALADDGVHEFLFVLGHARIQGAVQMIINPI 306          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A285SEP7 (Kynurenine formamidase n=4 Tax=Stappia TaxID=152161 RepID=A0A285SEP7_9HYPH)

HSP 1 Score: 134 bits (336), Expect = 5.280e-34
Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 0
Query:   37 FNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN----DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEVHAPGLWTD-YPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPL 245
            +NDD     LGIG  +DGLGH   D+ YY GH   +     G+  LGL  N+P  + R  +LDMA +YGV++V+ GK Y++ D++ AA   G+    GD+VL  S +   L+    DP+ F  +EPG G+  A  LA+   + + ADT G+EV    +  + +  H  L  + GIYI E  +  ELA+D+  +   V+   ++ G  Q+  NP+
Sbjct:  106 YNDDIFMGWLGIGPQIDGLGHAGIDHVYYNGHKAGDFAKAAGLTELGL-HNLPGLVGRGVLLDMAKFYGVDMVEEGKAYTADDVKAAAAQQGVELREGDVVLFNSNWMNLLDGPNADPKRFGAAEPGLGVSGAEYLAELGVMAVGADTWGMEVVPAEVEGEAFRAHQILQPQNGIYILENMDTRELAKDEAYEFLFVLGQARLKGAVQMIINPI 318          
BLAST of Ggra3842.t1 vs. uniprot
Match: A0A257LNQ0 (Polyketide cyclase n=1 Tax=Burkholderiales bacterium PBB5 TaxID=2015567 RepID=A0A257LNQ0_9BURK)

HSP 1 Score: 133 bits (335), Expect = 6.370e-34
Identity = 78/218 (35.78%), Postives = 115/218 (52.75%), Query Frame = 0
Query:   32 PDSTVFNDDSQNTSLGIGTHVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDMAAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLN-DPEIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEV----HAPGLWTDYPVHNYLMREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNP 244
            P  T +NDD  N   GIGT +DGLGH      YY G+   +  +  G++ LG A+ +P F+ R  +LDMA YYGV+++  G  ++ A+IEGAAK  G+    GD+V+  +G+   ++ DP+ F   EPG G D A  L  K+ + + AD+  +E        G+   + VH  L+   G YI E  N  EL +DK  +   V+   +  G  Q   NP
Sbjct:   97 PTKTTYNDDILNCWTGIGTQIDGLGHIGVGERYYNGNKWQDFANIGGLKKLG-ADKIPPFVTRGVLLDMAGYYGVDMLKEGTAFNRAEIEGAAKKQGVEIRQGDVVIFHTGWLSIIDKDPKRFGSVEPGLGRDGARYLVSKNVVAVGADSWAVEAIPFEAGAGI---FEVHQILLPMSGTYILENINTAELVKDKAWEFMFVLGQNKYQGAVQSMINP 310          
The following BLAST results are available for this feature:
BLAST of Ggra3842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0FZX87.500e-4538.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2E6Y0201.240e-3537.38Polyketide cyclase n=1 Tax=Stappia sp. TaxID=18709... [more]
A0A5C7Q5074.220e-3536.70Cyclase family protein n=1 Tax=Burkholderiaceae ba... [more]
A0A327XTK36.670e-3539.25Kynurenine formamidase n=2 Tax=Salipiger aestuarii... [more]
cyclase family protein n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001AD8F5358.330e-3539.25cyclase family protein n=1 Tax=Roseibium aggregatu... [more]
cyclase family protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI0016775E211.680e-3438.25cyclase family protein n=1 Tax=Thalassobaculum ful... [more]
A0A254RDL13.030e-3437.90Polyketide cyclase n=2 Tax=Oceanicola sp. 22II-s10... [more]
A0A1X4IUZ34.060e-3439.72Polyketide cyclase n=2 Tax=Pseudoruegeria sp. SK02... [more]
A0A285SEP75.280e-3435.98Kynurenine formamidase n=4 Tax=Stappia TaxID=15216... [more]
A0A257LNQ06.370e-3435.78Polyketide cyclase n=1 Tax=Burkholderiales bacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007325Kynurenine formamidase/cyclase-likePFAMPF04199Cyclasecoord: 42..184
e-value: 2.3E-15
score: 57.1
IPR037175Kynurenine formamidase superfamilyGENE3D3.50.30.50Putative cyclasecoord: 15..248
e-value: 8.9E-33
score: 115.7
IPR037175Kynurenine formamidase superfamilySUPERFAMILY102198Putative cyclasecoord: 35..233
NoneNo IPR availablePANTHERPTHR34861FAMILY NOT NAMEDcoord: 33..225
NoneNo IPR availablePANTHERPTHR34861:SF10SECRETED METAL-DEPENDENT CYCLASEcoord: 33..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2201168..2201995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3842.t1Ggra3842.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 2201168..2201995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3842.t1 ID=Ggra3842.t1|Name=Ggra3842.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=249bp
MTTTDKLGNAALLTQRSMLSAITGTKFTLRCPDSTVFNDDSQNTSLGIGT
HVDGLGHCERDNTYYAGHSKTEVYHTEGIRVLGLAENVPFFIARFKMLDM
AAYYGVEIVDGGKQYSSADIEGAAKAAGIVFNAGDIVLLRSGYTQYLNDP
EIFNLSEPGPGLDAAMCLAQKDPLMIAADTVGLEVHAPGLWTDYPVHNYL
MREKGIYIGEVFNLEELARDKVTQGTIVISITQIAGLCQVRCNPLCFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007325KFase/CYL
IPR037175KFase_sf