Ggra3833.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3833.t1
Unique NameGgra3833.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length301
Homology
BLAST of Ggra3833.t1 vs. uniprot
Match: A0A2V3IN18 (Zinc finger protein BRUTUS-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN18_9FLOR)

HSP 1 Score: 353 bits (905), Expect = 7.950e-117
Identity = 167/214 (78.04%), Postives = 181/214 (84.58%), Query Frame = 0
Query:    1 MDHEMVRFDTKRVRCMLCDCEQTVSDKCVQCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFR 214
            MDH MVR+DTK VRCMLC+  Q+VS  C  C   FARYFCA+CKFYDDTPGK IYHC KCKICRVG+GIG   XXXXXX   +SIE S  H C+K SLDANCPICG+YLFTSTRPVVFMRCGHTMHAHCFDDYT+ENFRCPLCQK+LTNMS+YYA+IDEMLKRE MPPEHRNK S ILCHDC+QRS T FHF+HHKCQ   CG YNTRVLRTFR
Sbjct:  147 MDHSMVRYDTKLVRCMLCNTVQSVSSTCTNCKKPFARYFCAVCKFYDDTPGKSIYHCDKCKICRVGEGIGXXXXXXXXXXXXVSIEHSDKHRCLKTSLDANCPICGAYLFTSTRPVVFMRCGHTMHAHCFDDYTMENFRCPLCQKSLTNMSAYYAQIDEMLKREQMPPEHRNKRSYILCHDCDQRSETAFHFDHHKCQ--HCGGYNTRVLRTFR 358          
BLAST of Ggra3833.t1 vs. uniprot
Match: R7QJV3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV3_CHOCR)

HSP 1 Score: 320 bits (821), Expect = 9.430e-103
Identity = 153/227 (67.40%), Postives = 179/227 (78.85%), Query Frame = 0
Query:    1 MDHEMVRFDTKRVRCMLCDCEQTVSDKCV--QCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTF-RAQGGGEGVEA 224
            +DH +VRFDT+ V CM C  EQ VS +C+  +C  +FARYFCA CKFYD+TPGK+IYHC KC+ICRVGKGIGHDNXXXXXX  C+S E SK H C+KKSLD NCPICG YL TST PVV+MRCGHTMHAHCFD YTVE++ CPLC KALTNM  YYA+IDE +K + MP +HRNK +E+LCHDC++RS T +HF + KCQ  DCGSYNTR+LRT  R  G G G  A
Sbjct:  301 VDHAIVRFDTQEVMCMFCLTEQPVSRRCMNEECNREFARYFCAKCKFYDNTPGKNIYHCDKCQICRVGKGIGHDNXXXXXXXXCVSRETSKTHRCLKKSLDVNCPICGHYLHTSTLPVVYMRCGHTMHAHCFDTYTVEHYICPLCHKALTNMRGYYAQIDEAMKEQEMPEKHRNKVAEVLCHDCDKRSETAYHFLYLKCQTPDCGSYNTRLLRTIERVAGEGSGRHA 527          
BLAST of Ggra3833.t1 vs. uniprot
Match: A0A7S0ZKZ4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKZ4_9RHOD)

HSP 1 Score: 275 bits (704), Expect = 3.630e-88
Identity = 123/210 (58.57%), Postives = 158/210 (75.24%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCVQCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRT 212
            H + R+ T+ V CMLCD  Q V + CV C V+FA YFCA CKFYD+   K IYHC KC +CR+GKG+G DN XXXXX AC+S++  + HHC+++SL+ +CPIC  YLFTST PVVFMRCGHTMH HCF++YT  N+ CPLC K+L NMSS+YAR+D++L +E++PPE+ N+ S ILC+DC  RS   FHF +HKC    C  YNT+VL+T
Sbjct:  125 HNIDRYATENVWCMLCDTLQPVGESCVNCKVKFASYFCATCKFYDNDANKSIYHCDKCGMCRIGKGVGVDNVXXXXXXACVSVDAIQRHHCLERSLEVDCPICSGYLFTSTLPVVFMRCGHTMHTHCFEEYTKTNYTCPLCCKSLANMSSFYARLDDILSKEILPPEYANRSSNILCNDCGVRSKAAFHFMYHKCGR--CKGYNTKVLQT 332          
BLAST of Ggra3833.t1 vs. uniprot
Match: R7QE64 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE64_CHOCR)

HSP 1 Score: 259 bits (662), Expect = 6.020e-82
Identity = 111/212 (52.36%), Postives = 141/212 (66.51%), Query Frame = 0
Query:    2 DHEMVRFDTKRVRCMLCDCEQTVSDKCVQCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTF 213
            DHEM RF T+R+ CM C  +Q V+ +CV C  QFA +FC  C+F+++TP K +YHC  C ICR+G+G+G DN      DAC+S+E    H CI K+L ANCP+C  YLFTST PVVFMRCGHTMH+ CF  YT   F+CPLC  ++ +M   +  IDE ++ E MP E   K S ILC+DC  +    +HFEHHKC  + C SYNTRVL  F
Sbjct:   57 DHEMDRFATERIVCMRCWKDQPVAARCVDCSAQFAHWFCKHCRFFENTPTKKVYHCDLCNICRLGEGLGIDNFHCHKCDACVSLESKSRHRCIGKALHANCPVCTGYLFTSTEPVVFMRCGHTMHSECFRQYTTRRFQCPLCMHSIVDMKKRFEYIDECVRNEPMPSEFHRKRSRILCNDCGNKCVAKYHFEHHKCDNDRCSSYNTRVLEEF 268          
BLAST of Ggra3833.t1 vs. uniprot
Match: A0A067BXG3 (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXG3_SAPPC)

HSP 1 Score: 260 bits (664), Expect = 5.910e-81
Identity = 118/214 (55.14%), Postives = 159/214 (74.30%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCVQ--CGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFR 214
            H   R++T+++ CM C   Q V   C    CG++FARYFC +CKFYDD P KDIYHC KC+ICR+GKG+G D XXXXXX  C+SI L K H C+++SL+++CPIC  Y+FTST PV+F+ CGH MH  C++DYT+ N+ CPLC K+L +M +Y+ARID++L +E MPPE+ N  S+I C DC ++S T FHF +HKCQ E+C SYNT+VL+  +
Sbjct:  165 HTFDRYETEKISCMQCHTVQPVGKTCTNAACGMEFARYFCDVCKFYDDDPTKDIYHCEKCRICRIGKGLGIDYXXXXXXXXCMSITLKK-HKCVERSLESDCPICHVYMFTSTTPVMFLPCGHCMHVACYEDYTLTNYICPLCSKSLGDMRTYFARIDDLLAQEQMPPEYANYRSQIYCSDCERKSETKFHFVYHKCQYEECKSYNTKVLKNIQ 377          
BLAST of Ggra3833.t1 vs. uniprot
Match: A0A1V9YMR9 (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMR9_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.360e-80
Identity = 119/211 (56.40%), Postives = 158/211 (74.88%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKC--VQCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLR 211
            H   R+ T+++ CM C   Q V+  C    CG++FARYFC +CKFYDD P KDIYHC KC+ICR+GKG+G D XXXXXX  C+SI L K H C+++SL+++CPIC  Y+FTST PV+F+ CGH MH  C++DYT+ N+ CPLC K+L +M +Y+ARID++L +E MPPE+ N  S+I C DC ++S T FHF +HKCQ EDC SYNT+VL+
Sbjct:  167 HVFDRYATEKISCMHCHTVQPVAKNCSNASCGIEFARYFCDVCKFYDDDPTKDIYHCEKCRICRIGKGLGIDYXXXXXXXXCMSITLKK-HKCVERSLESDCPICHVYMFTSTTPVMFLPCGHCMHVACYEDYTLTNYICPLCSKSLGDMRAYFARIDDLLAQEQMPPEYVNYRSQIYCSDCERKSETKFHFVYHKCQFEDCKSYNTKVLK 376          
BLAST of Ggra3833.t1 vs. uniprot
Match: K3WU11 (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU11_GLOUD)

HSP 1 Score: 255 bits (651), Expect = 2.060e-79
Identity = 119/217 (54.84%), Postives = 161/217 (74.19%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCV--QCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFRAQG 217
            H + R+ T+ + CM C+  Q +S++C+  +C   F RYFCA CKF+DD P KDIYHC KC+ICR+GKG+  D XXXXXX   +SI L K H C+++SL+++CPIC SY+FTST PV+F+ CGH MH  C+++YT+ N+ CPLC K+L +M  Y+A IDE+L+RE MPPE+++  S I C DC ++STT FHF +HKCQ EDC SYNT++LR FR  G
Sbjct:  163 HAIDRYATENILCMKCETVQPMSNECINEKCKTVFGRYFCATCKFFDDDPTKDIYHCDKCRICRIGKGLDIDYXXXXXXXXXMSISLKK-HKCVERSLESDCPICHSYMFTSTTPVMFLPCGHCMHVSCYEEYTLTNYICPLCSKSLGDMELYFASIDELLEREQMPPEYQDYKSFIYCSDCERKSTTNFHFVYHKCQFEDCMSYNTKLLRQFRELG 378          
BLAST of Ggra3833.t1 vs. uniprot
Match: W4G4B9 (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4B9_9STRA)

HSP 1 Score: 257 bits (656), Expect = 6.420e-79
Identity = 118/218 (54.13%), Postives = 160/218 (73.39%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCVQ--CGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFRAQGG 218
            H   R+ T+++ CM C   Q V  KC+   CGV FARY+C+ CKFYDD   KDIYHC KC+ICR+GKG+G D XXXXXX  C+SI L K H C+++SL+++CPIC  Y+FTST PV+F+ CGH MH  C++DYT  N+ CPLC K+L +M +Y+ARID++L  E MP E++N  S+I C DC ++S T FHF +HKCQ ++C SYNT+V++ F+ +GG
Sbjct:  225 HAFDRYATEKISCMECHTIQPVGPKCINDGCGVDFARYYCSECKFYDDDETKDIYHCEKCRICRIGKGLGVDYXXXXXXXXCMSITLKK-HKCVERSLESDCPICHVYMFTSTTPVMFLPCGHCMHVACYEDYTQTNYICPLCSKSLGDMRAYFARIDDLLSHEQMPAEYQNYRSQIYCSDCERKSETKFHFVYHKCQHDECKSYNTKVVKHFKQEGG 441          
BLAST of Ggra3833.t1 vs. uniprot
Match: F0WPF4 (Uncharacterized protein AlNc14C185G8299 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPF4_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.710e-79
Identity = 121/215 (56.28%), Postives = 157/215 (73.02%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCVQ--CGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFRA 215
            H + R+ T+ V CM C   Q VS++CV   CGV+FARYFC  CKFYDD   KDIYHC KCKICR+GKG+  D XXXXXX   +SI L K H C+++SL+++CPIC +++FTST PV+F+ CGH MH  C+++YT+ N+ CPLC K+L +M  Y+A IDE+L+RE MP E+ +  S I C DC +RS T FHF +HKCQ EDC SYNT+VL+ F A
Sbjct:  167 HSIDRYATEEVSCMCCATIQPVSNRCVDSLCGVEFARYFCGTCKFYDDDAKKDIYHCDKCKICRIGKGLDIDYXXXXXXXXXMSISLKK-HKCVERSLESDCPICHTFMFTSTTPVMFLPCGHCMHVTCYEEYTLSNYVCPLCSKSLGDMELYFASIDELLEREQMPIEYAHVRSLIYCSDCERRSVTKFHFVYHKCQQEDCSSYNTKVLKQFSA 380          
BLAST of Ggra3833.t1 vs. uniprot
Match: A0A2D4C7W5 (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W5_PYTIN)

HSP 1 Score: 251 bits (641), Expect = 3.350e-78
Identity = 115/212 (54.25%), Postives = 155/212 (73.11%), Query Frame = 0
Query:    3 HEMVRFDTKRVRCMLCDCEQTVSDKCVQCGVQFARYFCAICKFYDDTPGKDIYHCHKCKICRVGKGIGHDNXXXXXXDACISIELSKGHHCIKKSLDANCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNMSSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGEDCGSYNTRVLRTFR 214
            H   R+ T+ + CM C+  Q V   C+ C   FARYFC +CKF+DD P KDIYHC KCKICR+GKG+  D XXXXXX   +SI L K H C+++SL+++CPIC +++FTST PV+F+ CGH MH  C+++YT+ N+ CPLC K+L +M  Y+A IDE+L+RE MP E+++  S I C DC ++S TTFHF +HKCQ EDC SYNT++LR F+
Sbjct:  142 HSFDRYATETISCMRCNTMQPVGKTCINCHQDFARYFCNVCKFFDDDPTKDIYHCDKCKICRIGKGLEIDYXXXXXXXXXMSISLKK-HKCVERSLESDCPICHTFMFTSTTPVMFLPCGHCMHVSCYEEYTLTNYICPLCSKSLGDMELYFASIDELLEREQMPIEYQDFRSLIYCSDCERKSVTTFHFVYHKCQYEDCRSYNTKILRQFK 352          
The following BLAST results are available for this feature:
BLAST of Ggra3833.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN187.950e-11778.04Zinc finger protein BRUTUS-like n=1 Tax=Gracilario... [more]
R7QJV39.430e-10367.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZKZ43.630e-8858.57Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7QE646.020e-8252.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A067BXG35.910e-8155.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YMR91.360e-8056.40Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
K3WU112.060e-7954.84Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W4G4B96.420e-7954.13Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
F0WPF48.710e-7956.28Uncharacterized protein AlNc14C185G8299 n=1 Tax=Al... [more]
A0A2D4C7W53.350e-7854.25Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 102..143
e-value: 5.9E-5
score: 32.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 101..144
e-value: 1.8E-8
score: 34.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 102..144
score: 11.574592
NoneNo IPR availableGENE3D2.20.28.10coord: 172..216
e-value: 1.6E-14
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..300
NoneNo IPR availablePANTHERPTHR21319RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1coord: 2..211
NoneNo IPR availablePANTHERPTHR21319:SF0ZINC FINGER PROTEIN BRUTUScoord: 2..211
NoneNo IPR availableCDDcd16464RING-H2_Pirh2coord: 101..144
e-value: 8.09934E-15
score: 65.2944
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 101..151
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 95..146
e-value: 1.3E-10
score: 42.7
IPR039512RCHY1, zinc-ribbonPFAMPF14599zinc_ribbon_6coord: 149..208
e-value: 1.0E-18
score: 67.0
IPR008913Zinc finger, CHY-typePFAMPF05495zf-CHYcoord: 2..45
e-value: 3.4E-8
score: 33.8
IPR008913Zinc finger, CHY-typePROSITEPS51266ZF_CHYcoord: 1..33
score: 11.171213
IPR017921Zinc finger, CTCHY-typePROSITEPS51270ZF_CTCHYcoord: 35..101
score: 27.911823
IPR037275Zinc finger, CTCHY-type superfamilySUPERFAMILY161245Zinc hairpin stackcoord: 36..94
IPR037274Zinc finger, CHY-type superfamilySUPERFAMILY161219CHY zinc finger-likecoord: 2..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2182032..2182934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3833.t1Ggra3833.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 2182032..2182934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3833.t1 ID=Ggra3833.t1|Name=Ggra3833.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=301bp
MDHEMVRFDTKRVRCMLCDCEQTVSDKCVQCGVQFARYFCAICKFYDDTP
GKDIYHCHKCKICRVGKGIGHDNFHCDRCDACISIELSKGHHCIKKSLDA
NCPICGSYLFTSTRPVVFMRCGHTMHAHCFDDYTVENFRCPLCQKALTNM
SSYYARIDEMLKREVMPPEHRNKFSEILCHDCNQRSTTTFHFEHHKCQGE
DCGSYNTRVLRTFRAQGGGEGVEASASASSWQRDALSATESEGPCGGSAS
GAGASASGGAASGAASRMDCEARGCDDEELCAEDGRNSSGESLRMDDVQG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR039512RCHY1_zinc-ribbon
IPR008913Znf_CHY
IPR017921Znf_CTCHY
IPR037275Znf_CTCHY_sf
IPR037274Znf_CHY_sf