Ggra383.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra383.t1
Unique NameGgra383.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
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BLAST of Ggra383.t1 vs. uniprot
Match: A0A2V3IKH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH0_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 1.170e-49
Identity = 81/122 (66.39%), Postives = 97/122 (79.51%), Query Frame = 0 
Query:   24 PATKCLIRQARLLSKTTIVWIQGMVVWIVNDQIAIDDGSGIARIDVMNHTRRDLATDAATLKTGDYVLVVGEVRGRYKGHRMGLRATTLRNLSRFGVMMESMWHLEVVDAFLTSKEEQCKAE 145
            PA KCL+R AR L K   VWIQG+VVW   +Q AIDDGSGIAR+DV+NH +RDLA+   +LK GDYVL VGEV GRYKGHR+GLRATT+R L++ G MMESMWHLEV+DAFL  KE++ + E
Sbjct:   12 PARKCLVRHARFLGKKKTVWIQGVVVWTGENQFAIDDGSGIARVDVLNHRKRDLASCVLSLKVGDYVLAVGEVIGRYKGHRLGLRATTVRTLTQSGDMMESMWHLEVIDAFLYRKEKEREDE 133
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BLAST of Ggra383.t1 vs. uniprot
Match: R7Q995 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q995_CHOCR)

HSP 1 Score: 109 bits (272), Expect = 8.630e-28
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 0 
Query:   24 PATKCLIRQARLLSKTTIVWIQGMVVWIVNDQIAIDDGSGIARIDVMNHTRRDLATDAATLKTGDYVLVVGEVRGRYKGHRMGLRATTLRNLSRFGVMMESMWHLEVVDAFLTSKEE 140
            PA K LIR  R L+K T +WIQG+VVW+   Q+AIDDGSGIAR  +  + R +    +   + G YV+VVG +  R+KGHRMG++ATT+ +L+    M E++W+LEV DAFL  KE+
Sbjct:    9 PAQKGLIRTVRCLAKGTSIWIQGVVVWVSETQLAIDDGSGIARAALQEYMRHE---SSLPFREGQYVMVVGIMLKRFKGHRMGMKATTICDLTS-SPMFETLWNLEVADAFLYGKEK 121
The following BLAST results are available for this feature:
BLAST of Ggra383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IKH01.170e-4966.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9958.630e-2849.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 19..136
e-value: 2.6E-19
score: 71.2
IPR032245RecQ-mediated genome instability protein 2PFAMPF16100RMI2coord: 38..133
e-value: 1.4E-14
score: 54.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:235562..236041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra383.t1Ggra383.t1Gracilaria gracilis GNS1m malemRNAtig00000950_pilon 235562..236041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra383.t1 ID=Ggra383.t1|Name=Ggra383.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MSATRSNSSSGRTNTGLSVGSRTPATKCLIRQARLLSKTTIVWIQGMVVW
IVNDQIAIDDGSGIARIDVMNHTRRDLATDAATLKTGDYVLVVGEVRGRY
KGHRMGLRATTLRNLSRFGVMMESMWHLEVVDAFLTSKEEQCKAEDTSDV
EIVDCPDPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032245RMI2