Ggra3795.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3795.t1
Unique NameGgra3795.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Homology
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BLAST of Ggra3795.t1 vs. uniprot
Match: A0A2V3IME3 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.220e-35
Identity = 70/140 (50.00%), Postives = 99/140 (70.71%), Query Frame = 0 
Query:    3 CALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDASSPSS-RINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALDRIPQKADGPQNRNAQSEWIGSRQQGI 141
            CALNP  +++NPCPNGEVPV+++ L  F  V+F+LAINLRGY  DV+LLID SS +   + AIK EL S +R+L+G AKV VA+YGSE+ +D SG SVL++ +D V+ A++AL+ IP+  DG +      + + S   G+
Sbjct:   74 CALNPAVEKDNPCPNGEVPVKSINLTSF--VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGL 211
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BLAST of Ggra3795.t1 vs. uniprot
Match: A0A2V3IGT8 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 2.260e-25
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 0 
Query:    2 ECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDAS-SPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALDRIPQKADGPQ 125
            +CA++P       CPN E+PVE VTL+  RPVEF+LA NL  Y  DVI L DAS S  S ++A+K +L+  +R +     V + +YGSEQ F ++GYSVL + +     A+QAL  IP   DGP+
Sbjct:   67 QCAVDPSISPV--CPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPR 189
The following BLAST results are available for this feature:
BLAST of Ggra3795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME31.220e-3550.00VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGT82.260e-2545.60VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd00198vWFAcoord: 46..123
e-value: 0.00179216
score: 34.849
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 12..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1882539..1883103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t1Ggra3795.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1882539..1883103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3795.t1 ID=Ggra3795.t1|Name=Ggra3795.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPQNRNAQSEWIGSRQQGICSVTTVEWW
YCREV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf