Ggra3630.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3630.t1
Unique NameGgra3630.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Homology
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BLAST of Ggra3630.t1 vs. uniprot
Match: A0A2V3IK24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK24_9FLOR)

HSP 1 Score: 216 bits (549), Expect = 5.050e-70
Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 0 
Query:    1 MFALPVVPTISALPVALKALGELHHHATVLQSNALARQGLSTPERRGEDERLSRQRAGGISGGFGKSAPSWQRKVPSRPVAGDLRKQYEVGGLGNATSSRGNLLDILDKVPRKTHGFGDYKKINRPQPRRLPGFGNQSFTP 141
            MF +P+V  +SA+PVA+KA+GELH   TVLQSN LARQGLS P++RGED RLSRQRAGGISGG  K  PSW  KVPS+PV GDLRK YEVGGLGNATSS+GNL+DILD VPRKT G  DYKKINRPQP+RLPGFGNQSF+P
Sbjct:    1 MFVVPLVGAVSAIPVAIKAVGELHR-ITVLQSNTLARQGLSVPDKRGEDSRLSRQRAGGISGGLPKKEPSWAGKVPSKPVTGDLRKGYEVGGLGNATSSKGNLVDILDMVPRKTAGTSDYKKINRPQPKRLPGFGNQSFSP 140
The following BLAST results are available for this feature:
BLAST of Ggra3630.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK245.050e-7075.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:348261..348686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3630.t1Ggra3630.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 348261..348686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3630.t1 ID=Ggra3630.t1|Name=Ggra3630.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MFALPVVPTISALPVALKALGELHHHATVLQSNALARQGLSTPERRGEDE
RLSRQRAGGISGGFGKSAPSWQRKVPSRPVAGDLRKQYEVGGLGNATSSR
GNLLDILDKVPRKTHGFGDYKKINRPQPRRLPGFGNQSFTP*
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